RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 ITGB2P05107 769 aa19.9■□□□□ 0.78
SEC13-217ENST00000482647 SERPIND1P05546 499 aa19.9■□□□□ 0.78
SEC13-217ENST00000482647 GSTA1P08263 222 aa19.9■□□□□ 0.78
SEC13-217ENST00000482647 EPB42P16452 691 aa19.9■□□□□ 0.78
SEC13-217ENST00000482647 RPS18P62269 152 aaKnown RBP19.9■□□□□ 0.78
SEC13-217ENST00000482647 NFKB2Q00653 900 aa19.9■□□□□ 0.78
SEC13-217ENST00000482647 CDC20Q12834 499 aa19.9■□□□□ 0.78
SEC13-217ENST00000482647 PCBP2Q15366 365 aaKnown RBP eCLIP19.9■□□□□ 0.78
SEC13-217ENST00000482647 TBCCQ15814 346 aa19.9■□□□□ 0.78
SEC13-217ENST00000482647 PAGE2BQ5JRK9 111 aa19.9■□□□□ 0.78
SEC13-217ENST00000482647 TMEM214Q6NUQ4 689 aaKnown RBP19.9■□□□□ 0.78
SEC13-217ENST00000482647 MRPL14Q6P1L8 145 aaKnown RBP19.9■□□□□ 0.78
SEC13-217ENST00000482647 TMIGD1Q6UXZ0 262 aa19.9■□□□□ 0.78
SEC13-217ENST00000482647 TRPV3Q8NET8 790 aa19.9■□□□□ 0.78
SEC13-217ENST00000482647 WDR34Q96EX3 536 aa19.9■□□□□ 0.78
SEC13-217ENST00000482647 PTCD3Q96EY7 689 aaKnown RBP19.9■□□□□ 0.78
SEC13-217ENST00000482647 DCDC2Q9UHG0 476 aa19.9■□□□□ 0.78
SEC13-217ENST00000482647 MAU2Q9Y6X3 613 aa19.9■□□□□ 0.78
SEC13-217ENST00000482647 HEATR5BQ9P2D3 2071 aa19.9■□□□□ 0.78
SEC13-217ENST00000482647 A0A1W2PPM1 405 aa19.89■□□□□ 0.77
SEC13-217ENST00000482647 TLDC2A0PJX2 215 aa19.89■□□□□ 0.77
SEC13-217ENST00000482647 CASP2P42575 452 aa19.89■□□□□ 0.77
SEC13-217ENST00000482647 AVPR1BP47901 424 aa19.89■□□□□ 0.77
SEC13-217ENST00000482647 PIK3CGP48736 1102 aa19.89■□□□□ 0.77
SEC13-217ENST00000482647 IRF8Q02556 426 aa19.89■□□□□ 0.77
SEC13-217ENST00000482647 RGS1Q08116 209 aa19.89■□□□□ 0.77
SEC13-217ENST00000482647 LAPTM5Q13571 262 aa19.89■□□□□ 0.77
SEC13-217ENST00000482647 DOC2AQ14183 400 aa19.89■□□□□ 0.77
SEC13-217ENST00000482647 SLBPQ14493 270 aaKnown RBP eCLIP19.89■□□□□ 0.77
SEC13-217ENST00000482647 NAA30Q147X3 362 aaPredicted RBP19.89■□□□□ 0.77
SEC13-217ENST00000482647 HIST2H2ACQ16777 129 aaPredicted RBP19.89■□□□□ 0.77
SEC13-217ENST00000482647 UGT8Q16880 541 aa19.89■□□□□ 0.77
SEC13-217ENST00000482647 HIST2H2AA3Q6FI13 130 aa19.89■□□□□ 0.77
SEC13-217ENST00000482647 CYP4X1Q8N118 509 aa19.89■□□□□ 0.77
SEC13-217ENST00000482647 DTWD1Q8N5C7 304 aa19.89■□□□□ 0.77
SEC13-217ENST00000482647 TEX9Q8N6V9 391 aa19.89■□□□□ 0.77
SEC13-217ENST00000482647 PTGR2Q8N8N7 351 aaPredicted RBP19.89■□□□□ 0.77
SEC13-217ENST00000482647 TTLQ8NG68 377 aa19.89■□□□□ 0.77
SEC13-217ENST00000482647 OR2W6PQ8NHA6 318 aa19.89■□□□□ 0.77
SEC13-217ENST00000482647 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.89■□□□□ 0.77
SEC13-217ENST00000482647 SEC16BQ96JE7 1060 aa19.89■□□□□ 0.77
SEC13-217ENST00000482647 EFCAB11Q9BUY7 163 aa19.89■□□□□ 0.77
SEC13-217ENST00000482647 ROPN1BQ9BZX4 212 aaPredicted RBP19.89■□□□□ 0.77
SEC13-217ENST00000482647 SLC26A1Q9H2B4 701 aa19.89■□□□□ 0.77
SEC13-217ENST00000482647 NT5DC2Q9H857 520 aa19.89■□□□□ 0.77
SEC13-217ENST00000482647 WDR54Q9H977 334 aa19.89■□□□□ 0.77
SEC13-217ENST00000482647 ROPN1Q9HAT0 212 aaPredicted RBP19.89■□□□□ 0.77
SEC13-217ENST00000482647 CHD6Q8TD26 2715 aa19.88■□□□□ 0.77
SEC13-217ENST00000482647 A0A0A6YYC8 382 aaPredicted RBP19.88■□□□□ 0.77
SEC13-217ENST00000482647 CDC14CA4D256 554 aa19.88■□□□□ 0.77
SEC13-217ENST00000482647 STX16-NPEPL1H3BU86 382 aa19.88■□□□□ 0.77
SEC13-217ENST00000482647 I3L1I5 382 aaPredicted RBP19.88■□□□□ 0.77
SEC13-217ENST00000482647 TK2O00142 265 aa19.88■□□□□ 0.77
SEC13-217ENST00000482647 STX16O14662 325 aa19.88■□□□□ 0.77
SEC13-217ENST00000482647 KLF7O75840 302 aaPredicted RBP19.88■□□□□ 0.77
SEC13-217ENST00000482647 EPORP19235 508 aa19.88■□□□□ 0.77
SEC13-217ENST00000482647 FBLP22087 321 aaKnown RBP19.88■□□□□ 0.77
SEC13-217ENST00000482647 GSTM2P28161 218 aa19.88■□□□□ 0.77
SEC13-217ENST00000482647 PCDH1Q08174 1060 aa19.88■□□□□ 0.77
SEC13-217ENST00000482647 CHIT1Q13231 466 aa19.88■□□□□ 0.77
SEC13-217ENST00000482647 DSG2Q14126 1118 aa19.88■□□□□ 0.77
SEC13-217ENST00000482647 RIBC1Q8N443 379 aaPredicted RBP19.88■□□□□ 0.77
SEC13-217ENST00000482647 TMEM151AQ8N4L1 468 aa19.88■□□□□ 0.77
SEC13-217ENST00000482647 ANKRD53Q8N9V6 530 aa19.88■□□□□ 0.77
SEC13-217ENST00000482647 KCT2Q8NC54 265 aa19.88■□□□□ 0.77
SEC13-217ENST00000482647 OR2Y1Q8NGV0 311 aa19.88■□□□□ 0.77
SEC13-217ENST00000482647 NT5CQ8TCD5 201 aa19.88■□□□□ 0.77
SEC13-217ENST00000482647 PHF21BQ96EK2 531 aa19.88■□□□□ 0.77
SEC13-217ENST00000482647 MMABQ96EY8 250 aaPredicted RBP19.88■□□□□ 0.77
SEC13-217ENST00000482647 TMEM216Q9P0N5 145 aa19.88■□□□□ 0.77
SEC13-217ENST00000482647 COPG2Q9UBF2 871 aa19.88■□□□□ 0.77
SEC13-217ENST00000482647 NXT1Q9UKK6 140 aaKnown RBP19.88■□□□□ 0.77
SEC13-217ENST00000482647 PTRH2Q9Y3E5 179 aaKnown RBP19.88■□□□□ 0.77
SEC13-217ENST00000482647 SLC22A7Q9Y694 548 aa19.88■□□□□ 0.77
SEC13-217ENST00000482647 FOXS1O43638 330 aa19.87■□□□□ 0.77
SEC13-217ENST00000482647 WFS1O76024 890 aa19.87■□□□□ 0.77
SEC13-217ENST00000482647 TAC1P20366 129 aa19.87■□□□□ 0.77
SEC13-217ENST00000482647 FOLR3P41439 243 aa19.87■□□□□ 0.77
SEC13-217ENST00000482647 CCT5P48643 541 aa19.87■□□□□ 0.77
SEC13-217ENST00000482647 OCA2Q04671 838 aa19.87■□□□□ 0.77
SEC13-217ENST00000482647 GTF2H2Q13888 395 aa19.87■□□□□ 0.77
SEC13-217ENST00000482647 HERC3Q15034 1050 aa19.87■□□□□ 0.77
SEC13-217ENST00000482647 ATP1A1-AS1Q5TC04 95 aa19.87■□□□□ 0.77
SEC13-217ENST00000482647 GTF2H2CQ6P1K8 395 aa19.87■□□□□ 0.77
SEC13-217ENST00000482647 COX15Q7KZN9 410 aa19.87■□□□□ 0.77
SEC13-217ENST00000482647 THAP4Q8WY91 577 aa19.87■□□□□ 0.77
SEC13-217ENST00000482647 UBE2E3Q969T4 207 aa19.87■□□□□ 0.77
SEC13-217ENST00000482647 MOCOSQ96EN8 888 aa19.87■□□□□ 0.77
SEC13-217ENST00000482647 ANKHQ9HCJ1 492 aa19.87■□□□□ 0.77
SEC13-217ENST00000482647 ZNF282Q9UDV7 671 aaPredicted RBP19.87■□□□□ 0.77
SEC13-217ENST00000482647 MRPS2Q9Y399 296 aaKnown RBP19.87■□□□□ 0.77
SEC13-217ENST00000482647 URADA6NGE7 173 aa19.86■□□□□ 0.77
SEC13-217ENST00000482647 FOXO6A8MYZ6 492 aa19.86■□□□□ 0.77
SEC13-217ENST00000482647 H0YIG0 161 aa19.86■□□□□ 0.77
SEC13-217ENST00000482647 E2F3O00716 465 aa19.86■□□□□ 0.77
SEC13-217ENST00000482647 PRAMEF4O60810 478 aa19.86■□□□□ 0.77
SEC13-217ENST00000482647 SIX3O95343 332 aaPredicted RBP19.86■□□□□ 0.77
SEC13-217ENST00000482647 NSA2O95478 260 aaKnown RBP19.86■□□□□ 0.77
SEC13-217ENST00000482647 SERPINA6P08185 405 aa19.86■□□□□ 0.77
SEC13-217ENST00000482647 SBK3P0C264 359 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms