RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 UTS2RQ9UKP6 389 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 AP3M1Q9Y2T2 418 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 TMEM265A0A087WTH1 108 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 TBC1D3DA0A087WVF3 549 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 TBC1D3IA0A087WXS9 549 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 TBC1D3EA0A087X179 549 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 TBC1D3KA0A087X1G2 549 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 TBC1D3FA6NER0 549 aaPredicted RBP13.91□□□□□ -0.18
CHD3-211ENST00000481999 OR52A4PA6NMU1 304 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 TBC1D3LB9A6J9 549 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 TBC1D3HP0C7X1 549 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 THRBP10828 461 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 C5AR1P21730 350 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 MTHFRP42898 656 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 CTBSQ01459 385 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 SLBPQ14493 270 aaKnown RBP eCLIP13.91□□□□□ -0.18
CHD3-211ENST00000481999 LIPJQ5W064 366 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 TBC1D3GQ6DHY5 549 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 TBC1D3CQ6IPX1 549 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 KCTD8Q6ZWB6 473 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 STK32CQ86UX6 486 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 ZDHHC13Q8IUH4 622 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 TBC1D3Q8IZP1 549 aaPredicted RBP13.91□□□□□ -0.18
CHD3-211ENST00000481999 FLCNQ8NFG4 579 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 FIG4Q92562 907 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 TFGQ92734 400 aaPredicted RBP13.91□□□□□ -0.18
CHD3-211ENST00000481999 MSLNLQ96KJ4 702 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 MUS81Q96NY9 551 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 DOK1Q99704 481 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 SORBS1Q9BX66 1292 aaKnown RBP13.91□□□□□ -0.18
CHD3-211ENST00000481999 OR51B5Q9H339 312 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 IFT80Q9P2H3 777 aaPredicted RBP13.91□□□□□ -0.18
CHD3-211ENST00000481999 VPS29Q9UBQ0 182 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 KCNE2Q9Y6J6 123 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 HEATR5BQ9P2D3 2071 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 ADPRHP54922 357 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 RAE1P78406 368 aaKnown RBP13.9□□□□□ -0.18
CHD3-211ENST00000481999 CYP4F3Q08477 520 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 HKDC1Q2TB90 917 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 ADAMTSL4Q6UY14 1074 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 GCNT7Q6ZNI0 430 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 ZNF551Q7Z340 670 aaPredicted RBP13.9□□□□□ -0.18
CHD3-211ENST00000481999 LRRTM4Q86VH4 590 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 CROCCP3Q8IVE0 287 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 CLECL1Q8IZS7 167 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 FRMD1Q8N878 549 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 TP53I13Q8NBR0 393 aaPredicted RBP13.9□□□□□ -0.18
CHD3-211ENST00000481999 SMRP1Q8NCR6 262 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 ZNF548Q8NEK5 533 aaPredicted RBP13.9□□□□□ -0.18
CHD3-211ENST00000481999 ATL1Q8WXF7 558 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 JPH3Q8WXH2 748 aaPredicted RBP13.9□□□□□ -0.18
CHD3-211ENST00000481999 CMTM7Q96FZ5 175 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 CNDP2Q96KP4 475 aaKnown RBP13.9□□□□□ -0.18
CHD3-211ENST00000481999 LINC00615Q96LM1 132 aaPredicted RBP13.9□□□□□ -0.18
CHD3-211ENST00000481999 XKR8Q9H6D3 395 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 CARS2Q9HA77 564 aaKnown RBP13.9□□□□□ -0.18
CHD3-211ENST00000481999 PREBQ9HCU5 417 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 DNAJB9Q9UBS3 223 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 GPR34Q9UPC5 381 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 PIAS3Q9Y6X2 628 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 PLXND1Q9Y4D7 1925 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 POM121BA6NF01 834 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 NARSO43776 548 aaKnown RBP13.9□□□□□ -0.18
CHD3-211ENST00000481999 VEGFDO43915 354 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 SCELO95171 688 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 STATHP02808 62 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 NTSR1P30989 418 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 CLDN8P56748 225 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 EPS8Q12929 822 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 UGT8Q16880 541 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 ZIK1Q3SY52 487 aaPredicted RBP13.9□□□□□ -0.18
CHD3-211ENST00000481999 GRHL2Q6ISB3 625 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 CAPN13Q6MZZ7 669 aaPredicted RBP13.9□□□□□ -0.18
CHD3-211ENST00000481999 ZNF773Q6PK81 442 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 SYT12Q8IV01 421 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 OR52E4Q8NGH9 312 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 RIPOR3Q96MK2 946 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 ING2Q9H160 280 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 PLGRKTQ9HBL7 147 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 SPATA6Q9NWH7 488 aaPredicted RBP13.9□□□□□ -0.18
CHD3-211ENST00000481999 CUEDC1Q9NWM3 386 aaPredicted RBP13.9□□□□□ -0.18
CHD3-211ENST00000481999 GALNT8Q9NY28 637 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 LIMD1Q9UGP4 676 aa13.9□□□□□ -0.18
CHD3-211ENST00000481999 HEMK1Q9Y5R4 338 aaPredicted RBP13.9□□□□□ -0.18
CHD3-211ENST00000481999 A0A0J9YVX5 310 aa13.89□□□□□ -0.19
CHD3-211ENST00000481999 H3BMQ9 156 aa13.89□□□□□ -0.19
CHD3-211ENST00000481999 IGFALSP35858 605 aa13.89□□□□□ -0.19
CHD3-211ENST00000481999 PNLIPRP1P54315 467 aa13.89□□□□□ -0.19
CHD3-211ENST00000481999 CASP9P55211 416 aa13.89□□□□□ -0.19
CHD3-211ENST00000481999 CYP4F2P78329 520 aa13.89□□□□□ -0.19
CHD3-211ENST00000481999 GPR107Q5VW38 600 aa13.89□□□□□ -0.19
CHD3-211ENST00000481999 ZNF776Q68DI1 518 aaPredicted RBP13.89□□□□□ -0.19
CHD3-211ENST00000481999 GALNT10Q86SR1 603 aa13.89□□□□□ -0.19
CHD3-211ENST00000481999 MMP21Q8N119 569 aa13.89□□□□□ -0.19
CHD3-211ENST00000481999 DNAJB8Q8NHS0 232 aa13.89□□□□□ -0.19
CHD3-211ENST00000481999 COG8Q96MW5 612 aa13.89□□□□□ -0.19
CHD3-211ENST00000481999 DCUN1D5Q9BTE7 237 aa13.89□□□□□ -0.19
CHD3-211ENST00000481999 REXO4Q9GZR2 422 aaKnown RBP13.89□□□□□ -0.19
CHD3-211ENST00000481999 PAIP1Q9H074 479 aaKnown RBP13.89□□□□□ -0.19
CHD3-211ENST00000481999 TMEM9Q9P0T7 183 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms