RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 FDXRP22570 491 aa17.54■□□□□ 0.4
CLK1-211ENST00000481641 IL2P60568 153 aa17.54■□□□□ 0.4
CLK1-211ENST00000481641 CAPN13Q6MZZ7 669 aaPredicted RBP17.54■□□□□ 0.4
CLK1-211ENST00000481641 ANKMY2Q8IV38 441 aa17.54■□□□□ 0.4
CLK1-211ENST00000481641 CAMKVQ8NCB2 501 aa17.54■□□□□ 0.4
CLK1-211ENST00000481641 METTL21AQ8WXB1 218 aa17.54■□□□□ 0.4
CLK1-211ENST00000481641 MOCOSQ96EN8 888 aa17.54■□□□□ 0.4
CLK1-211ENST00000481641 HIST1H2AHQ96KK5 128 aa17.54■□□□□ 0.4
CLK1-211ENST00000481641 OR4K3Q96R72 315 aa17.54■□□□□ 0.4
CLK1-211ENST00000481641 HIST1H2AJQ99878 128 aa17.54■□□□□ 0.4
CLK1-211ENST00000481641 H2AFJQ9BTM1 129 aa17.54■□□□□ 0.4
CLK1-211ENST00000481641 RBCK1Q9BYM8 510 aa17.54■□□□□ 0.4
CLK1-211ENST00000481641 ARL15Q9NXU5 204 aa17.54■□□□□ 0.4
CLK1-211ENST00000481641 VWA7Q9Y334 891 aa17.54■□□□□ 0.4
CLK1-211ENST00000481641 CPAMD8Q8IZJ3 1885 aa17.54■□□□□ 0.4
CLK1-211ENST00000481641 DNAJB6O75190 326 aa17.53■□□□□ 0.4
CLK1-211ENST00000481641 GUCA1CO95843 209 aa17.53■□□□□ 0.4
CLK1-211ENST00000481641 B3GALT4O96024 378 aa17.53■□□□□ 0.4
CLK1-211ENST00000481641 EDN3P14138 238 aa17.53■□□□□ 0.4
CLK1-211ENST00000481641 ST13P50502 369 aaKnown RBP17.53■□□□□ 0.4
CLK1-211ENST00000481641 TNFSF10P50591 281 aa17.53■□□□□ 0.4
CLK1-211ENST00000481641 ITGA8P53708 1063 aa17.53■□□□□ 0.4
CLK1-211ENST00000481641 MORF4L2Q15014 288 aa17.53■□□□□ 0.4
CLK1-211ENST00000481641 STEAP4Q687X5 459 aa17.53■□□□□ 0.4
CLK1-211ENST00000481641 ZNF787Q6DD87 383 aa17.53■□□□□ 0.4
CLK1-211ENST00000481641 HIBCHQ6NVY1 386 aaPredicted RBP17.53■□□□□ 0.4
CLK1-211ENST00000481641 FAM180AQ6UWF9 173 aa17.53■□□□□ 0.4
CLK1-211ENST00000481641 TMEM207Q6UWW9 146 aa17.53■□□□□ 0.4
CLK1-211ENST00000481641 RIPOR1Q6ZS17 1223 aa17.53■□□□□ 0.4
CLK1-211ENST00000481641 CPEB2Q7Z5Q1 589 aaKnown RBP17.53■□□□□ 0.4
CLK1-211ENST00000481641 GALNT7Q86SF2 657 aa17.53■□□□□ 0.4
CLK1-211ENST00000481641 CREG2Q8IUH2 290 aa17.53■□□□□ 0.4
CLK1-211ENST00000481641 PDIK1LQ8N165 341 aa17.53■□□□□ 0.4
CLK1-211ENST00000481641 MFSD9Q8NBP5 474 aa17.53■□□□□ 0.4
CLK1-211ENST00000481641 ZNF740Q8NDX6 193 aa17.53■□□□□ 0.4
CLK1-211ENST00000481641 OR5T3Q8NGG3 340 aa17.53■□□□□ 0.4
CLK1-211ENST00000481641 OR56A3Q8NH54 315 aa17.53■□□□□ 0.4
CLK1-211ENST00000481641 HAS2Q92819 552 aa17.53■□□□□ 0.4
CLK1-211ENST00000481641 SNF8Q96H20 258 aa17.53■□□□□ 0.4
CLK1-211ENST00000481641 TAAR6Q96RI8 345 aa17.53■□□□□ 0.4
CLK1-211ENST00000481641 TUBB6Q9BUF5 446 aa17.53■□□□□ 0.4
CLK1-211ENST00000481641 TRIM31Q9BZY9 425 aa17.53■□□□□ 0.4
CLK1-211ENST00000481641 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.53■□□□□ 0.4
CLK1-211ENST00000481641 SPNS1Q9H2V7 528 aa17.53■□□□□ 0.4
CLK1-211ENST00000481641 ANKHQ9HCJ1 492 aa17.53■□□□□ 0.4
CLK1-211ENST00000481641 NAALAD2Q9Y3Q0 740 aa17.53■□□□□ 0.4
CLK1-211ENST00000481641 PSAT1Q9Y617 370 aa17.53■□□□□ 0.4
CLK1-211ENST00000481641 TEX264Q9Y6I9 313 aa17.53■□□□□ 0.4
CLK1-211ENST00000481641 CACNA1DQ01668 2161 aa17.53■□□□□ 0.4
CLK1-211ENST00000481641 CROCCQ5TZA2 2017 aa17.52■□□□□ 0.4
CLK1-211ENST00000481641 PCDH17O14917 1159 aa17.52■□□□□ 0.4
CLK1-211ENST00000481641 TTI1O43156 1089 aa17.52■□□□□ 0.4
CLK1-211ENST00000481641 LRRTM2O43300 516 aa17.52■□□□□ 0.4
CLK1-211ENST00000481641 OR1F1O43749 312 aa17.52■□□□□ 0.4
CLK1-211ENST00000481641 SAT1P21673 171 aa17.52■□□□□ 0.4
CLK1-211ENST00000481641 CCND1P24385 295 aa17.52■□□□□ 0.4
CLK1-211ENST00000481641 GRK3P35626 688 aa17.52■□□□□ 0.4
CLK1-211ENST00000481641 DR1Q01658 176 aa17.52■□□□□ 0.4
CLK1-211ENST00000481641 CATSPEREQ5SY80 951 aa17.52■□□□□ 0.4
CLK1-211ENST00000481641 DUPD1Q68J44 220 aa17.52■□□□□ 0.4
CLK1-211ENST00000481641 FCRLBQ6BAA4 426 aa17.52■□□□□ 0.4
CLK1-211ENST00000481641 RPUSD3Q6P087 351 aaKnown RBP17.52■□□□□ 0.4
CLK1-211ENST00000481641 MAMDC2Q7Z304 686 aaPredicted RBP17.52■□□□□ 0.4
CLK1-211ENST00000481641 ANKRD37Q7Z713 158 aa17.52■□□□□ 0.4
CLK1-211ENST00000481641 BCORP1Q8N888 145 aa17.52■□□□□ 0.4
CLK1-211ENST00000481641 PEX11GQ96HA9 241 aa17.52■□□□□ 0.4
CLK1-211ENST00000481641 SLX1AQ9BQ83 275 aa17.52■□□□□ 0.4
CLK1-211ENST00000481641 HAUS8Q9BT25 410 aa17.52■□□□□ 0.4
CLK1-211ENST00000481641 OLAHQ9NV23 265 aa17.52■□□□□ 0.4
CLK1-211ENST00000481641 CENPEQ02224 2701 aa17.51■□□□□ 0.39
CLK1-211ENST00000481641 TRAV17A0A0B4J275 112 aa17.51■□□□□ 0.39
CLK1-211ENST00000481641 A8MUI8 341 aa17.51■□□□□ 0.39
CLK1-211ENST00000481641 CDC123O75794 336 aaPredicted RBP17.51■□□□□ 0.39
CLK1-211ENST00000481641 SERPIND1P05546 499 aa17.51■□□□□ 0.39
CLK1-211ENST00000481641 CCR8P51685 355 aa17.51■□□□□ 0.39
CLK1-211ENST00000481641 GNG11P61952 73 aa17.51■□□□□ 0.39
CLK1-211ENST00000481641 ZNF33BQ06732 778 aa17.51■□□□□ 0.39
CLK1-211ENST00000481641 FASTKD3Q14CZ7 662 aaKnown RBP17.51■□□□□ 0.39
CLK1-211ENST00000481641 BTBD16Q32M84 506 aa17.51■□□□□ 0.39
CLK1-211ENST00000481641 FAM45BPQ6NSW5 357 aa17.51■□□□□ 0.39
CLK1-211ENST00000481641 ABHD11Q8NFV4 315 aa17.51■□□□□ 0.39
CLK1-211ENST00000481641 FAM45AQ8TCE6 357 aa17.51■□□□□ 0.39
CLK1-211ENST00000481641 FBXL8Q96CD0 374 aa17.51■□□□□ 0.39
CLK1-211ENST00000481641 TSNARE1Q96NA8 513 aa17.51■□□□□ 0.39
CLK1-211ENST00000481641 TRIM54Q9BYV2 358 aa17.51■□□□□ 0.39
CLK1-211ENST00000481641 STMN3Q9NZ72 180 aa17.51■□□□□ 0.39
CLK1-211ENST00000481641 CTAGE15A4D2H0 777 aa17.5■□□□□ 0.39
CLK1-211ENST00000481641 PABPN1LA6NDY0 278 aaKnown RBP17.5■□□□□ 0.39
CLK1-211ENST00000481641 CDC7O00311 574 aa17.5■□□□□ 0.39
CLK1-211ENST00000481641 TP73O15350 636 aa17.5■□□□□ 0.39
CLK1-211ENST00000481641 NDUFS4O43181 175 aa17.5■□□□□ 0.39
CLK1-211ENST00000481641 SLC35G6P0C7Q6 338 aa17.5■□□□□ 0.39
CLK1-211ENST00000481641 ICAM2P13598 275 aa17.5■□□□□ 0.39
CLK1-211ENST00000481641 AP1S2P56377 157 aa17.5■□□□□ 0.39
CLK1-211ENST00000481641 ARL4CP56559 192 aa17.5■□□□□ 0.39
CLK1-211ENST00000481641 KCNK10P57789 538 aa17.5■□□□□ 0.39
CLK1-211ENST00000481641 OLR1P78380 273 aa17.5■□□□□ 0.39
CLK1-211ENST00000481641 MRPS25P82663 173 aaKnown RBP17.5■□□□□ 0.39
CLK1-211ENST00000481641 ZNF460Q14592 562 aa17.5■□□□□ 0.39
CLK1-211ENST00000481641 ABHD17BQ5VST6 288 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms