RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 SPRTNQ9H040 489 aaPredicted RBP8.66□□□□□ -1.02
VCP-206ENST00000480327 TMBIM4Q9HC24 238 aa8.66□□□□□ -1.02
VCP-206ENST00000480327 KCNK9Q9NPC2 374 aa8.66□□□□□ -1.02
VCP-206ENST00000480327 FGF21Q9NSA1 209 aa8.66□□□□□ -1.02
VCP-206ENST00000480327 SLC17A7Q9P2U7 560 aa8.66□□□□□ -1.02
VCP-206ENST00000480327 OPTCQ9UBM4 332 aa8.66□□□□□ -1.02
VCP-206ENST00000480327 SNX7Q9UNH6 387 aa8.66□□□□□ -1.02
VCP-206ENST00000480327 BTRCQ9Y297 605 aa8.66□□□□□ -1.02
VCP-206ENST00000480327 ANGPTL3Q9Y5C1 460 aa8.66□□□□□ -1.02
VCP-206ENST00000480327 KCNE2Q9Y6J6 123 aa8.66□□□□□ -1.02
VCP-206ENST00000480327 HEATR5BQ9P2D3 2071 aa8.66□□□□□ -1.02
VCP-206ENST00000480327 MYO9AB2RTY4 2548 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 LOC105369274A0A096LPK9 316 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 LOC102723532A0A0G2JNH3 316 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 CCDC189A1A4V9 331 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 OR2A25A4D2G3 310 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 TARM1B6A8C7 271 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 G3V2L1 256 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 K7EPI3 171 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 CLGNO14967 610 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 KLK8O60259 260 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 PLIN3O60664 434 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 SASH3O75995 380 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 IPO13O94829 963 aaKnown RBP8.65□□□□□ -1.02
VCP-206ENST00000480327 FKBP9O95302 570 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 EIF2S1P05198 315 aaKnown RBP8.65□□□□□ -1.02
VCP-206ENST00000480327 MYL2P10916 166 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 FGF5P12034 268 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 TSPAN8P19075 237 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 ARL1P40616 181 aaPredicted RBP8.65□□□□□ -1.02
VCP-206ENST00000480327 GABRA4P48169 554 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 CCR8P51685 355 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 VSX2P58304 361 aaPredicted RBP8.65□□□□□ -1.02
VCP-206ENST00000480327 CSNK1G2P78368 415 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 MC1RQ01726 317 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 ACY1Q03154 408 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 PDK4Q16654 411 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 CCDC153Q494R4 210 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 XKR6Q5GH73 641 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 FRMPD2BQ6IN97 320 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 ZNF425Q6IV72 752 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 TCTN3Q6NUS6 607 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 FBXO42Q6P3S6 717 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 LRRC70Q7Z2Q7 622 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 MCATQ8IVS2 390 aaKnown RBP8.65□□□□□ -1.02
VCP-206ENST00000480327 KLHDC8AQ8IYD2 350 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 OR4N4Q8N0Y3 316 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 ZNF740Q8NDX6 193 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 OR1L3Q8NH93 324 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 TCP10LQ8TDR4 215 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 CT55Q8WUE5 264 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 UBTD2Q8WUN7 234 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 ARL8AQ96BM9 186 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 ZNF501Q96CX3 271 aaPredicted RBP8.65□□□□□ -1.02
VCP-206ENST00000480327 PGM2Q96G03 612 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 NSUN5Q96P11 429 aaKnown RBP8.65□□□□□ -1.02
VCP-206ENST00000480327 FAM111AQ96PZ2 611 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 SPNS1Q9H2V7 528 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 SYNPO2LQ9H987 977 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 FANCEQ9HB96 536 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 PRM3Q9NNZ6 103 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 TMEM184CQ9NVA4 438 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 RARRES3Q9UL19 164 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 PLCL2Q9UPR0 1127 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 PLLPQ9Y342 182 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 PCDHGA6Q9Y5G7 932 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 NUP210LQ5VU65 1888 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 NOTCH2Q04721 2471 aa8.65□□□□□ -1.02
VCP-206ENST00000480327 MDC1Q14676 2089 aaKnown RBP8.65□□□□□ -1.03
VCP-206ENST00000480327 SEC16AO15027 2179 aa8.64□□□□□ -1.03
VCP-206ENST00000480327 CDC14CA4D256 554 aa8.64□□□□□ -1.03
VCP-206ENST00000480327 H0YGG7 62 aa8.64□□□□□ -1.03
VCP-206ENST00000480327 OR1F1O43749 312 aa8.64□□□□□ -1.03
VCP-206ENST00000480327 TYROBPO43914 113 aa8.64□□□□□ -1.03
VCP-206ENST00000480327 LCMT2O60294 686 aaKnown RBP8.64□□□□□ -1.03
VCP-206ENST00000480327 PRAMEF4O60810 478 aa8.64□□□□□ -1.03
VCP-206ENST00000480327 KATNA1O75449 491 aa8.64□□□□□ -1.03
VCP-206ENST00000480327 CREG1O75629 220 aa8.64□□□□□ -1.03
VCP-206ENST00000480327 OR2B3O76000 313 aa8.64□□□□□ -1.03
VCP-206ENST00000480327 NTRK1P04629 796 aa8.64□□□□□ -1.03
VCP-206ENST00000480327 C1GALT1C1LP0DN25 315 aa8.64□□□□□ -1.03
VCP-206ENST00000480327 CPA3P15088 417 aa8.64□□□□□ -1.03
VCP-206ENST00000480327 EPB42P16452 691 aa8.64□□□□□ -1.03
VCP-206ENST00000480327 GNAZP19086 355 aa8.64□□□□□ -1.03
VCP-206ENST00000480327 EPORP19235 508 aa8.64□□□□□ -1.03
VCP-206ENST00000480327 ATP5F1P24539 256 aaPredicted RBP8.64□□□□□ -1.03
VCP-206ENST00000480327 CDH13P55290 713 aa8.64□□□□□ -1.03
VCP-206ENST00000480327 ARF3P61204 181 aaPredicted RBP8.64□□□□□ -1.03
VCP-206ENST00000480327 MAGOHP61326 146 aaKnown RBP8.64□□□□□ -1.03
VCP-206ENST00000480327 RPS18P62269 152 aaKnown RBP8.64□□□□□ -1.03
VCP-206ENST00000480327 CHIT1Q13231 466 aa8.64□□□□□ -1.03
VCP-206ENST00000480327 DNASE1L3Q13609 305 aa8.64□□□□□ -1.03
VCP-206ENST00000480327 GTF2H2Q13888 395 aa8.64□□□□□ -1.03
VCP-206ENST00000480327 DOC2AQ14183 400 aa8.64□□□□□ -1.03
VCP-206ENST00000480327 SLBPQ14493 270 aaKnown RBP eCLIP8.64□□□□□ -1.03
VCP-206ENST00000480327 IL11RAQ14626 422 aa8.64□□□□□ -1.03
VCP-206ENST00000480327 NAA25Q14CX7 972 aa8.64□□□□□ -1.03
VCP-206ENST00000480327 RBBP5Q15291 538 aaKnown RBP8.64□□□□□ -1.03
VCP-206ENST00000480327 PCBP2Q15366 365 aaKnown RBP eCLIP8.64□□□□□ -1.03
VCP-206ENST00000480327 GLIPR1L2Q4G1C9 344 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms