RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 LIPJQ5W064 366 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 SLC5A11Q8WWX8 675 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 SORCS1Q8WY21 1168 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 CLSTN3Q9BQT9 956 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 PCDHGA7Q9Y5G6 932 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 HMX2A2RU54 273 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 LRRC72A6NJI9 287 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 NME4O00746 187 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 NME6O75414 186 aaPredicted RBP13.88□□□□□ -0.19
COL20A1-206ENST00000479501 ATXN1LP0C7T5 689 aaKnown RBP13.88□□□□□ -0.19
COL20A1-206ENST00000479501 HSD17B1P14061 328 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 INHBCP55103 352 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 TAS2R50P59544 299 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 RHAGQ02094 409 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 PUDPQ08623 228 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 LARS2Q15031 903 aaKnown RBP13.88□□□□□ -0.19
COL20A1-206ENST00000479501 LCN1P1Q5VSP4 162 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 NIPAL1Q6NVV3 410 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 KLHL35Q6PF15 583 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 TRAM1L1Q8N609 369 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 WDR48Q8TAF3 677 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 KCNS3Q9BQ31 491 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 KLF16Q9BXK1 252 aaPredicted RBP13.88□□□□□ -0.19
COL20A1-206ENST00000479501 MAFFQ9ULX9 164 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 TMEM98Q9Y2Y6 226 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 PCDHB3Q9Y5E6 796 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 PPP6CO00743 305 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 SLC16A5O15375 505 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 SRCP12931 536 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 ATF6P18850 670 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 FPR1P21462 350 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 ZNF140P52738 457 aaPredicted RBP13.88□□□□□ -0.19
COL20A1-206ENST00000479501 CDK6Q00534 326 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 SUZ12Q15022 739 aaKnown RBP13.88□□□□□ -0.19
COL20A1-206ENST00000479501 NPTX1Q15818 432 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 CRTC1Q6UUV9 634 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 FAM129CQ86XR2 697 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 TTLQ8NG68 377 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 FCGR1BQ92637 280 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 RNF38Q9H0F5 515 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 PRKAB1Q9Y478 270 aa13.88□□□□□ -0.19
COL20A1-206ENST00000479501 MPZL2O60487 215 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 TFPTP0C1Z6 253 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 RPL34P49207 117 aaKnown RBP13.87□□□□□ -0.19
COL20A1-206ENST00000479501 OR4D2P58180 307 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 DSTNP60981 165 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 LRRC32Q14392 662 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 C18orf21Q32NC0 220 aaPredicted RBP13.87□□□□□ -0.19
COL20A1-206ENST00000479501 ATG9BQ674R7 924 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 SLC39A11Q8N1S5 342 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 RGMAQ96B86 450 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 PDCD10Q9BUL8 212 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 LMAN2LQ9H0V9 348 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 TTYH1Q9H313 450 aaPredicted RBP13.87□□□□□ -0.19
COL20A1-206ENST00000479501 SRMSQ9H3Y6 488 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 SMURF2Q9HAU4 748 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 LOC100130705A0A1B0GUX0 176 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 A6NHS1 94 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 TSPAN4O14817 238 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 SLC30A4O14863 429 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 PIK3CBP42338 1070 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 ATP6AP1Q15904 470 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 CTC1Q2NKJ3 1217 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 CMPK2Q5EBM0 449 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 FAM26DQ5JW98 314 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 ANKRD26P1Q6NSI1 321 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 TICAM1Q8IUC6 712 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 GOLM1Q8NBJ4 401 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 LRRC20Q8TCA0 184 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 COL21A1Q96P44 957 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 SMIM14Q96QK8 99 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 DCSTAMPQ9H295 470 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 CARS2Q9HA77 564 aaKnown RBP13.87□□□□□ -0.19
COL20A1-206ENST00000479501 MAT2BQ9NZL9 334 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 PRELID1Q9Y255 219 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 KNL1Q8NG31 2342 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 PRMT3O60678 531 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 CTSAP10619 480 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 ITIH1P19827 911 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 NT5EP21589 574 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 RPL4P36578 427 aaKnown RBP13.87□□□□□ -0.19
COL20A1-206ENST00000479501 ACTR1BP42025 376 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 ACTR1AP61163 376 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 PCBP2Q15366 365 aaKnown RBP eCLIP13.87□□□□□ -0.19
COL20A1-206ENST00000479501 ZNF648Q5T619 568 aaPredicted RBP13.87□□□□□ -0.19
COL20A1-206ENST00000479501 SLC22A16Q86VW1 577 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 LGI4Q8N135 537 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 NATD1Q8N6N6 113 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 ZCCHC10Q8TBK6 192 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 CALML5Q9NZT1 146 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 MYOCOSA0A1B0GUC4 107 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 FABP12A6NFH5 140 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 CCRL2O00421 344 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 ORC5O43913 435 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 JUNP05412 331 aaKnown RBP13.87□□□□□ -0.19
COL20A1-206ENST00000479501 CD247P20963 164 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 GTF2E2P29084 291 aaKnown RBP13.87□□□□□ -0.19
COL20A1-206ENST00000479501 HOXC13P31276 330 aa13.87□□□□□ -0.19
COL20A1-206ENST00000479501 GANABQ14697 944 aaKnown RBP13.87□□□□□ -0.19
COL20A1-206ENST00000479501 MYBPC3Q14896 1274 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms