RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 KERAO60938 352 aa14.8□□□□□ -0.04
HMGA1-206ENST00000478214 SUPT3HO75486 399 aa14.8□□□□□ -0.04
HMGA1-206ENST00000478214 STK16O75716 305 aa14.8□□□□□ -0.04
HMGA1-206ENST00000478214 IPO13O94829 963 aaKnown RBP14.8□□□□□ -0.04
HMGA1-206ENST00000478214 S100BP04271 92 aaPredicted RBP14.8□□□□□ -0.04
HMGA1-206ENST00000478214 SERPIND1P05546 499 aa14.8□□□□□ -0.04
HMGA1-206ENST00000478214 ABHD2P08910 425 aa14.8□□□□□ -0.04
HMGA1-206ENST00000478214 ZGLP1P0C6A0 271 aa14.8□□□□□ -0.04
HMGA1-206ENST00000478214 MYBL2P10244 700 aa14.8□□□□□ -0.04
HMGA1-206ENST00000478214 IL1RNP18510 177 aa14.8□□□□□ -0.04
HMGA1-206ENST00000478214 GNAZP19086 355 aa14.8□□□□□ -0.04
HMGA1-206ENST00000478214 MMP11P24347 488 aa14.8□□□□□ -0.04
HMGA1-206ENST00000478214 GLRBP48167 497 aa14.8□□□□□ -0.04
HMGA1-206ENST00000478214 SERPINB9P50453 376 aa14.8□□□□□ -0.04
HMGA1-206ENST00000478214 MAT1AQ00266 395 aaKnown RBP14.8□□□□□ -0.04
HMGA1-206ENST00000478214 OCA2Q04671 838 aa14.8□□□□□ -0.04
HMGA1-206ENST00000478214 SYT16Q17RD7 645 aa14.8□□□□□ -0.04
HMGA1-206ENST00000478214 FAM83EQ2M2I3 478 aa14.8□□□□□ -0.04
HMGA1-206ENST00000478214 SLCO4C1Q6ZQN7 724 aa14.8□□□□□ -0.04
HMGA1-206ENST00000478214 TBC1D19Q8N5T2 526 aa14.8□□□□□ -0.04
HMGA1-206ENST00000478214 TMEM102Q8N9M5 508 aaPredicted RBP14.8□□□□□ -0.04
HMGA1-206ENST00000478214 MIEF2Q96C03 454 aa14.8□□□□□ -0.04
HMGA1-206ENST00000478214 IP6K3Q96PC2 410 aa14.8□□□□□ -0.04
HMGA1-206ENST00000478214 AIF1LQ9BQI0 150 aa14.8□□□□□ -0.04
HMGA1-206ENST00000478214 YIPF2Q9BWQ6 316 aa14.8□□□□□ -0.04
HMGA1-206ENST00000478214 TXLNGYQ9BZA5 131 aa14.8□□□□□ -0.04
HMGA1-206ENST00000478214 VPS11Q9H270 941 aa14.8□□□□□ -0.04
HMGA1-206ENST00000478214 CNOT10Q9H9A5 744 aaKnown RBP14.8□□□□□ -0.04
HMGA1-206ENST00000478214 ACSS2Q9NR19 701 aa14.8□□□□□ -0.04
HMGA1-206ENST00000478214 P4HTMQ9NXG6 502 aa14.8□□□□□ -0.04
HMGA1-206ENST00000478214 NUDT4Q9NZJ9 180 aa14.8□□□□□ -0.04
HMGA1-206ENST00000478214 ASB1Q9Y576 335 aa14.8□□□□□ -0.04
HMGA1-206ENST00000478214 PCSK5Q92824 1860 aa14.8□□□□□ -0.04
HMGA1-206ENST00000478214 EXOC1LA0A1B0GW35 172 aa14.79□□□□□ -0.04
HMGA1-206ENST00000478214 TRIM49D1C9J1S8 452 aa14.79□□□□□ -0.04
HMGA1-206ENST00000478214 K7EM74 188 aa14.79□□□□□ -0.04
HMGA1-206ENST00000478214 MASP2O00187 686 aa14.79□□□□□ -0.04
HMGA1-206ENST00000478214 PEX12O00623 359 aa14.79□□□□□ -0.04
HMGA1-206ENST00000478214 PRAMEF4O60810 478 aa14.79□□□□□ -0.04
HMGA1-206ENST00000478214 KRT38O76015 456 aa14.79□□□□□ -0.04
HMGA1-206ENST00000478214 KLHL2O95198 593 aa14.79□□□□□ -0.04
HMGA1-206ENST00000478214 NSA2O95478 260 aaKnown RBP14.79□□□□□ -0.04
HMGA1-206ENST00000478214 SLC35G6P0C7Q6 338 aa14.79□□□□□ -0.04
HMGA1-206ENST00000478214 C1GALT1C1LP0DN25 315 aa14.79□□□□□ -0.04
HMGA1-206ENST00000478214 NR1D1P20393 614 aa14.79□□□□□ -0.04
HMGA1-206ENST00000478214 MAGEA12P43365 314 aa14.79□□□□□ -0.04
HMGA1-206ENST00000478214 AVPR1BP47901 424 aa14.79□□□□□ -0.04
HMGA1-206ENST00000478214 KLC1Q07866 573 aa14.79□□□□□ -0.04
HMGA1-206ENST00000478214 RBBP5Q15291 538 aaKnown RBP14.79□□□□□ -0.04
HMGA1-206ENST00000478214 PRAMEF9Q5VWM5 478 aa14.79□□□□□ -0.04
HMGA1-206ENST00000478214 MED25Q71SY5 747 aa14.79□□□□□ -0.04
HMGA1-206ENST00000478214 TAOK1Q7L7X3 1001 aa14.79□□□□□ -0.04
HMGA1-206ENST00000478214 LAPTM4BQ86VI4 370 aa14.79□□□□□ -0.04
HMGA1-206ENST00000478214 SHISA5Q8N114 240 aa14.79□□□□□ -0.04
HMGA1-206ENST00000478214 PLD6Q8N2A8 252 aaKnown RBP14.79□□□□□ -0.04
HMGA1-206ENST00000478214 SNX31Q8N9S9 440 aa14.79□□□□□ -0.04
HMGA1-206ENST00000478214 ANKRD53Q8N9V6 530 aa14.79□□□□□ -0.04
HMGA1-206ENST00000478214 ISL2Q96A47 359 aa14.79□□□□□ -0.04
HMGA1-206ENST00000478214 GPR78Q96P69 363 aa14.79□□□□□ -0.04
HMGA1-206ENST00000478214 CRB3Q9BUF7 120 aa14.79□□□□□ -0.04
HMGA1-206ENST00000478214 ZFP69BQ9UJL9 534 aa14.79□□□□□ -0.04
HMGA1-206ENST00000478214 ZNF180Q9UJW8 692 aa14.79□□□□□ -0.04
HMGA1-206ENST00000478214 TP53TG5Q9Y2B4 290 aa14.79□□□□□ -0.04
HMGA1-206ENST00000478214 MAP4K5Q9Y4K4 846 aa14.79□□□□□ -0.04
HMGA1-206ENST00000478214 CCDC88CQ9P219 2028 aa14.78□□□□□ -0.04
HMGA1-206ENST00000478214 A6NL46 340 aa14.78□□□□□ -0.04
HMGA1-206ENST00000478214 B8ZZF3 427 aa14.78□□□□□ -0.04
HMGA1-206ENST00000478214 H0YIG0 161 aa14.78□□□□□ -0.04
HMGA1-206ENST00000478214 SGK494L7N484 410 aa14.78□□□□□ -0.04
HMGA1-206ENST00000478214 SOCS6O14544 535 aa14.78□□□□□ -0.04
HMGA1-206ENST00000478214 CCNT2O60583 730 aaKnown RBP14.78□□□□□ -0.04
HMGA1-206ENST00000478214 MTHFD2P13995 350 aa14.78□□□□□ -0.04
HMGA1-206ENST00000478214 GCAP28676 217 aa14.78□□□□□ -0.04
HMGA1-206ENST00000478214 AHRP35869 848 aa14.78□□□□□ -0.04
HMGA1-206ENST00000478214 AGTR2P50052 363 aa14.78□□□□□ -0.04
HMGA1-206ENST00000478214 RRADP55042 308 aa14.78□□□□□ -0.04
HMGA1-206ENST00000478214 PWP1Q13610 501 aa14.78□□□□□ -0.04
HMGA1-206ENST00000478214 SLBPQ14493 270 aaKnown RBP eCLIP14.78□□□□□ -0.04
HMGA1-206ENST00000478214 SLC29A2Q14542 456 aa14.78□□□□□ -0.04
HMGA1-206ENST00000478214 ACAP2Q15057 778 aa14.78□□□□□ -0.04
HMGA1-206ENST00000478214 LACTB2Q53H82 288 aaPredicted RBP14.78□□□□□ -0.04
HMGA1-206ENST00000478214 ATG9BQ674R7 924 aa14.78□□□□□ -0.04
HMGA1-206ENST00000478214 PTRH1Q86Y79 214 aaKnown RBP14.78□□□□□ -0.04
HMGA1-206ENST00000478214 PDSS2Q86YH6 399 aa14.78□□□□□ -0.04
HMGA1-206ENST00000478214 ZC3H7AQ8IWR0 971 aaKnown RBP14.78□□□□□ -0.04
HMGA1-206ENST00000478214 RHEBL1Q8TAI7 183 aa14.78□□□□□ -0.04
HMGA1-206ENST00000478214 NT5CQ8TCD5 201 aa14.78□□□□□ -0.04
HMGA1-206ENST00000478214 MESP1Q9BRJ9 268 aa14.78□□□□□ -0.04
HMGA1-206ENST00000478214 CAPS2Q9BXY5 557 aa14.78□□□□□ -0.04
HMGA1-206ENST00000478214 CD244Q9BZW8 370 aa14.78□□□□□ -0.04
HMGA1-206ENST00000478214 EPB41L4BQ9H329 900 aa14.78□□□□□ -0.04
HMGA1-206ENST00000478214 ANKHQ9HCJ1 492 aa14.78□□□□□ -0.04
HMGA1-206ENST00000478214 MKKSQ9NPJ1 570 aaPredicted RBP14.78□□□□□ -0.04
HMGA1-206ENST00000478214 ZNF358Q9NW07 568 aa14.78□□□□□ -0.04
HMGA1-206ENST00000478214 GPRC5BQ9NZH0 403 aa14.78□□□□□ -0.04
HMGA1-206ENST00000478214 C3orf18Q9UK00 162 aa14.78□□□□□ -0.04
HMGA1-206ENST00000478214 HS3ST3B1Q9Y662 390 aa14.78□□□□□ -0.04
HMGA1-206ENST00000478214 SLC22A7Q9Y694 548 aa14.78□□□□□ -0.04
HMGA1-206ENST00000478214 FASNP49327 2511 aaKnown RBP14.78□□□□□ -0.04
HMGA1-206ENST00000478214 MED13Q9UHV7 2174 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms