RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 THAP11Q96EK4 314 aa15.76■□□□□ 0.11
TRIM13-208ENST00000478111 MS4A14Q96JA4 679 aa15.76■□□□□ 0.11
TRIM13-208ENST00000478111 KLF2Q9Y5W3 355 aaPredicted RBP15.76■□□□□ 0.11
TRIM13-208ENST00000478111 GOLGA6L6A8MZA4 724 aa15.75■□□□□ 0.11
TRIM13-208ENST00000478111 CCL21O00585 134 aa15.75■□□□□ 0.11
TRIM13-208ENST00000478111 MAN1A2O60476 641 aa15.75■□□□□ 0.11
TRIM13-208ENST00000478111 GABRB3P28472 473 aa15.75■□□□□ 0.11
TRIM13-208ENST00000478111 TUBA3CQ13748 450 aa15.75■□□□□ 0.11
TRIM13-208ENST00000478111 CYP1B1Q16678 543 aa15.75■□□□□ 0.11
TRIM13-208ENST00000478111 ZNF766Q5HY98 468 aa15.75■□□□□ 0.11
TRIM13-208ENST00000478111 TUBA3EQ6PEY2 450 aa15.75■□□□□ 0.11
TRIM13-208ENST00000478111 AGTRAPQ6RW13 159 aa15.75■□□□□ 0.11
TRIM13-208ENST00000478111 MCEMP1Q8IX19 187 aa15.75■□□□□ 0.11
TRIM13-208ENST00000478111 BEST3Q8N1M1 668 aa15.75■□□□□ 0.11
TRIM13-208ENST00000478111 MDS2Q8NDY4 140 aa15.75■□□□□ 0.11
TRIM13-208ENST00000478111 PLPP5Q8NEB5 264 aa15.75■□□□□ 0.11
TRIM13-208ENST00000478111 CALML6Q8TD86 181 aa15.75■□□□□ 0.11
TRIM13-208ENST00000478111 ZNF354BQ96LW1 612 aa15.75■□□□□ 0.11
TRIM13-208ENST00000478111 SIGLEC12Q96PQ1 595 aa15.75■□□□□ 0.11
TRIM13-208ENST00000478111 SGPP1Q9BX95 441 aa15.75■□□□□ 0.11
TRIM13-208ENST00000478111 PCBD2Q9H0N5 130 aa15.75■□□□□ 0.11
TRIM13-208ENST00000478111 ATG10Q9H0Y0 220 aa15.75■□□□□ 0.11
TRIM13-208ENST00000478111 LANCL2Q9NS86 450 aa15.75■□□□□ 0.11
TRIM13-208ENST00000478111 C19orf25Q9UFG5 118 aaPredicted RBP15.75■□□□□ 0.11
TRIM13-208ENST00000478111 TEKT2Q9UIF3 430 aa15.75■□□□□ 0.11
TRIM13-208ENST00000478111 PCDHGB6Q9Y5F9 930 aa15.75■□□□□ 0.11
TRIM13-208ENST00000478111 RDH16O75452 317 aa15.74■□□□□ 0.11
TRIM13-208ENST00000478111 NPPBP16860 134 aa15.74■□□□□ 0.11
TRIM13-208ENST00000478111 CD96P40200 585 aa15.74■□□□□ 0.11
TRIM13-208ENST00000478111 ST13P50502 369 aaKnown RBP15.74■□□□□ 0.11
TRIM13-208ENST00000478111 RHAGQ02094 409 aa15.74■□□□□ 0.11
TRIM13-208ENST00000478111 NAE1Q13564 534 aa15.74■□□□□ 0.11
TRIM13-208ENST00000478111 MFSD4BQ5TF39 518 aa15.74■□□□□ 0.11
TRIM13-208ENST00000478111 CCDC137Q6PK04 289 aaKnown RBP15.74■□□□□ 0.11
TRIM13-208ENST00000478111 MRGPRGQ86SM5 289 aa15.74■□□□□ 0.11
TRIM13-208ENST00000478111 ASPGQ86U10 573 aa15.74■□□□□ 0.11
TRIM13-208ENST00000478111 CRLF3Q8IUI8 442 aa15.74■□□□□ 0.11
TRIM13-208ENST00000478111 ZNF808Q8N4W9 903 aaPredicted RBP15.74■□□□□ 0.11
TRIM13-208ENST00000478111 CAMKVQ8NCB2 501 aa15.74■□□□□ 0.11
TRIM13-208ENST00000478111 C2CD4AQ8NCU7 369 aaPredicted RBP15.74■□□□□ 0.11
TRIM13-208ENST00000478111 ZCCHC10Q8TBK6 192 aa15.74■□□□□ 0.11
TRIM13-208ENST00000478111 M1APQ8TC57 530 aa15.74■□□□□ 0.11
TRIM13-208ENST00000478111 MCOLN3Q8TDD5 553 aa15.74■□□□□ 0.11
TRIM13-208ENST00000478111 SLC13A3Q8WWT9 602 aa15.74■□□□□ 0.11
TRIM13-208ENST00000478111 NDNQ99608 321 aa15.74■□□□□ 0.11
TRIM13-208ENST00000478111 HES7Q9BYE0 225 aa15.74■□□□□ 0.11
TRIM13-208ENST00000478111 KCNK13Q9HB14 408 aa15.74■□□□□ 0.11
TRIM13-208ENST00000478111 PARVBQ9HBI1 364 aa15.74■□□□□ 0.11
TRIM13-208ENST00000478111 ANKHQ9HCJ1 492 aa15.74■□□□□ 0.11
TRIM13-208ENST00000478111 MMP25Q9NPA2 562 aa15.74■□□□□ 0.11
TRIM13-208ENST00000478111 IARS2Q9NSE4 1012 aaKnown RBP15.74■□□□□ 0.11
TRIM13-208ENST00000478111 SLC22A7Q9Y694 548 aa15.74■□□□□ 0.11
TRIM13-208ENST00000478111 MAD1L1Q9Y6D9 718 aa15.74■□□□□ 0.11
TRIM13-208ENST00000478111 HIVEP1P15822 2718 aa15.74■□□□□ 0.11
TRIM13-208ENST00000478111 F8P00451 2351 aa15.73■□□□□ 0.11
TRIM13-208ENST00000478111 DNAJB6O75190 326 aa15.73■□□□□ 0.11
TRIM13-208ENST00000478111 C8GP07360 202 aa15.73■□□□□ 0.11
TRIM13-208ENST00000478111 MYBL2P10244 700 aa15.73■□□□□ 0.11
TRIM13-208ENST00000478111 CDH1P12830 882 aa15.73■□□□□ 0.11
TRIM13-208ENST00000478111 AGTR2P50052 363 aa15.73■□□□□ 0.11
TRIM13-208ENST00000478111 CCZ1BP86790 482 aa15.73■□□□□ 0.11
TRIM13-208ENST00000478111 CCZ1P86791 482 aaPredicted RBP15.73■□□□□ 0.11
TRIM13-208ENST00000478111 PHKG1Q16816 387 aa15.73■□□□□ 0.11
TRIM13-208ENST00000478111 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.73■□□□□ 0.112e-6■■□□□ 11.5
TRIM13-208ENST00000478111 RBM20Q5T481 1227 aaKnown RBP15.73■□□□□ 0.11
TRIM13-208ENST00000478111 CAPN13Q6MZZ7 669 aaPredicted RBP15.73■□□□□ 0.11
TRIM13-208ENST00000478111 PAQR3Q6TCH7 311 aa15.73■□□□□ 0.11
TRIM13-208ENST00000478111 LCTLQ6UWM7 567 aa15.73■□□□□ 0.11
TRIM13-208ENST00000478111 C17orf64Q86WR6 236 aa15.73■□□□□ 0.11
TRIM13-208ENST00000478111 LRRC8AQ8IWT6 810 aa15.73■□□□□ 0.11
TRIM13-208ENST00000478111 AFAP1L2Q8N4X5 818 aa15.73■□□□□ 0.11
TRIM13-208ENST00000478111 MFSD9Q8NBP5 474 aa15.73■□□□□ 0.11
TRIM13-208ENST00000478111 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.73■□□□□ 0.11
TRIM13-208ENST00000478111 OR5T3Q8NGG3 340 aa15.73■□□□□ 0.11
TRIM13-208ENST00000478111 MOCOSQ96EN8 888 aa15.73■□□□□ 0.11
TRIM13-208ENST00000478111 SCMH1Q96GD3 660 aa15.73■□□□□ 0.11
TRIM13-208ENST00000478111 SARGQ9BW04 601 aa15.73■□□□□ 0.11
TRIM13-208ENST00000478111 SUCOQ9UBS9 1254 aaKnown RBP15.73■□□□□ 0.11
TRIM13-208ENST00000478111 TRMT6Q9UJA5 497 aaKnown RBP15.73■□□□□ 0.11
TRIM13-208ENST00000478111 NAALAD2Q9Y3Q0 740 aa15.73■□□□□ 0.11
TRIM13-208ENST00000478111 ZNF860A6NHJ4 632 aa15.72■□□□□ 0.11
TRIM13-208ENST00000478111 SLC16A5O15375 505 aa15.72■□□□□ 0.11
TRIM13-208ENST00000478111 TSPAN12O95859 305 aa15.72■□□□□ 0.11
TRIM13-208ENST00000478111 POU3F2P20265 443 aaPredicted RBP15.72■□□□□ 0.11
TRIM13-208ENST00000478111 CDKN2DP55273 166 aa15.72■□□□□ 0.11
TRIM13-208ENST00000478111 ADORA2A-AS1P86434 159 aa15.72■□□□□ 0.11
TRIM13-208ENST00000478111 DHX9Q08211 1270 aaKnown RBP15.72■□□□□ 0.11
TRIM13-208ENST00000478111 SP140Q13342 867 aa15.72■□□□□ 0.11
TRIM13-208ENST00000478111 EXT1Q16394 746 aa15.72■□□□□ 0.11
TRIM13-208ENST00000478111 C3AR1Q16581 482 aa15.72■□□□□ 0.11
TRIM13-208ENST00000478111 MEP1AQ16819 746 aa15.72■□□□□ 0.11
TRIM13-208ENST00000478111 ZNF630Q2M218 657 aaPredicted RBP15.72■□□□□ 0.11
TRIM13-208ENST00000478111 SFT2D3Q587I9 215 aa15.72■□□□□ 0.11
TRIM13-208ENST00000478111 SPINK14Q6IE38 97 aa15.72■□□□□ 0.11
TRIM13-208ENST00000478111 LRRC8EQ6NSJ5 796 aa15.72■□□□□ 0.11
TRIM13-208ENST00000478111 PAPD4Q6PIY7 484 aaKnown RBP15.72■□□□□ 0.11
TRIM13-208ENST00000478111 BNC2Q6ZN30 1099 aaPredicted RBP15.72■□□□□ 0.11
TRIM13-208ENST00000478111 ABHD11Q8NFV4 315 aa15.72■□□□□ 0.11
TRIM13-208ENST00000478111 OR4K1Q8NGD4 311 aa15.72■□□□□ 0.11
TRIM13-208ENST00000478111 TSLPQ969D9 159 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms