RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 MRPL57Q9BQC6 102 aaKnown RBP9.78□□□□□ -0.84
HDAC6-222ENST00000478095 AIF1LQ9BQI0 150 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 EFHD1Q9BUP0 239 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 NLNQ9BYT8 704 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 MRPL46Q9H2W6 279 aaKnown RBP9.78□□□□□ -0.84
HDAC6-222ENST00000478095 PPCSQ9HAB8 311 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 ENAMQ9NRM1 1142 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 SLC22A11Q9NSA0 550 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 GEMIN8Q9NWZ8 242 aaKnown RBP9.78□□□□□ -0.84
HDAC6-222ENST00000478095 GPRC5BQ9NZH0 403 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 GPN3Q9UHW5 284 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-222ENST00000478095 KCND3Q9UK17 655 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 PLAAQ9Y263 795 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 FARSAQ9Y285 508 aaKnown RBP9.78□□□□□ -0.84
HDAC6-222ENST00000478095 ANGPTL3Q9Y5C1 460 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 PKD1L2Q7Z442 2459 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 ANKRD11Q6UB99 2663 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-222ENST00000478095 CCDC189A1A4V9 331 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 CDC14CA4D256 554 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 ZNF891A8MT65 544 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-222ENST00000478095 TXNDC9O14530 226 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 SMIM24O75264 130 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 CREG1O75629 220 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 SLC35G6P0C7Q6 338 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 IL1RNP18510 177 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 CD22P20273 847 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 PTPN4P29074 926 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 EEF1DP29692 281 aaKnown RBP9.77□□□□□ -0.85
HDAC6-222ENST00000478095 HNF4AP41235 474 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 SCTRP47872 440 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 IRF8Q02556 426 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 CDC20Q12834 499 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 CHIT1Q13231 466 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 IL10RAQ13651 578 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 DOC2AQ14183 400 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 YOD1Q5VVQ6 348 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-222ENST00000478095 ATG9BQ674R7 924 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 ADNP2Q6IQ32 1131 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 SHISA6Q6ZSJ9 500 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 RPS27LQ71UM5 84 aaKnown RBP9.77□□□□□ -0.85
HDAC6-222ENST00000478095 COX15Q7KZN9 410 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 PRSS41Q7RTY9 318 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 GOLGA7Q7Z5G4 137 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 MYLK4Q86YV6 388 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-222ENST00000478095 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.77□□□□□ -0.85
HDAC6-222ENST00000478095 SHISA5Q8N114 240 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 TMEM151AQ8N4L1 468 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 TBC1D19Q8N5T2 526 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 CAMKVQ8NCB2 501 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 ACMSDQ8TDX5 336 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 COL26A1Q96A83 441 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 MMABQ96EY8 250 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-222ENST00000478095 DPH2Q9BQC3 489 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-222ENST00000478095 CAPS2Q9BXY5 557 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 GPR87Q9BY21 358 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 SLC6A16Q9GZN6 736 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 DRC3Q9H069 523 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 C12orf65Q9H3J6 166 aaKnown RBP9.77□□□□□ -0.85
HDAC6-222ENST00000478095 PRM3Q9NNZ6 103 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 ACSS2Q9NR19 701 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 CTSFQ9UBX1 484 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 ZFP69BQ9UJL9 534 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 RALYQ9UKM9 306 aaKnown RBP9.77□□□□□ -0.85
HDAC6-222ENST00000478095 PCDHGA6Q9Y5G7 932 aa9.77□□□□□ -0.85
HDAC6-222ENST00000478095 ZFHX4Q86UP3 3567 aa9.76□□□□□ -0.85
HDAC6-222ENST00000478095 ZNF860A6NHJ4 632 aa9.76□□□□□ -0.85
HDAC6-222ENST00000478095 A8MT66 165 aa9.76□□□□□ -0.85
HDAC6-222ENST00000478095 E2F3O00716 465 aa9.76□□□□□ -0.85
HDAC6-222ENST00000478095 FOXS1O43638 330 aa9.76□□□□□ -0.85
HDAC6-222ENST00000478095 H2AFYO75367 372 aaKnown RBP9.76□□□□□ -0.85
HDAC6-222ENST00000478095 B3GALT4O96024 378 aa9.76□□□□□ -0.85
HDAC6-222ENST00000478095 TUBBP07437 444 aa9.76□□□□□ -0.85
HDAC6-222ENST00000478095 FURINP09958 794 aa9.76□□□□□ -0.85
HDAC6-222ENST00000478095 RAB40ALP0C0E4 278 aa9.76□□□□□ -0.85
HDAC6-222ENST00000478095 EPB42P16452 691 aa9.76□□□□□ -0.85
HDAC6-222ENST00000478095 KRT4P19013 534 aa9.76□□□□□ -0.85
HDAC6-222ENST00000478095 FBLP22087 321 aaKnown RBP9.76□□□□□ -0.85
HDAC6-222ENST00000478095 ARL1P40616 181 aaPredicted RBP9.76□□□□□ -0.85
HDAC6-222ENST00000478095 MAT1AQ00266 395 aaKnown RBP9.76□□□□□ -0.85
HDAC6-222ENST00000478095 GTF2H2Q13888 395 aa9.76□□□□□ -0.85
HDAC6-222ENST00000478095 RASA2Q15283 850 aa9.76□□□□□ -0.85
HDAC6-222ENST00000478095 PCBP2Q15366 365 aaKnown RBP eCLIP9.76□□□□□ -0.85
HDAC6-222ENST00000478095 NDUFA9Q16795 377 aa9.76□□□□□ -0.85
HDAC6-222ENST00000478095 SYT16Q17RD7 645 aa9.76□□□□□ -0.85
HDAC6-222ENST00000478095 GARNL3Q5VVW2 1013 aa9.76□□□□□ -0.85
HDAC6-222ENST00000478095 TMEM214Q6NUQ4 689 aaKnown RBP9.76□□□□□ -0.85
HDAC6-222ENST00000478095 GTF2H2CQ6P1K8 395 aa9.76□□□□□ -0.85
HDAC6-222ENST00000478095 MRPL14Q6P1L8 145 aaKnown RBP9.76□□□□□ -0.85
HDAC6-222ENST00000478095 TMIGD1Q6UXZ0 262 aa9.76□□□□□ -0.85
HDAC6-222ENST00000478095 SH2D5Q6ZV89 423 aa9.76□□□□□ -0.85
HDAC6-222ENST00000478095 PRSS58Q8IYP2 241 aa9.76□□□□□ -0.85
HDAC6-222ENST00000478095 KRT78Q8N1N4 520 aa9.76□□□□□ -0.85
HDAC6-222ENST00000478095 OR9A4Q8NGU2 314 aa9.76□□□□□ -0.85
HDAC6-222ENST00000478095 CCT6BQ92526 530 aa9.76□□□□□ -0.85
HDAC6-222ENST00000478095 TM4SF19Q96DZ7 209 aa9.76□□□□□ -0.85
HDAC6-222ENST00000478095 PTCD3Q96EY7 689 aaKnown RBP9.76□□□□□ -0.85
HDAC6-222ENST00000478095 NSUN5Q96P11 429 aaKnown RBP9.76□□□□□ -0.85
HDAC6-222ENST00000478095 C17orf62Q9BQA9 187 aa9.76□□□□□ -0.85
HDAC6-222ENST00000478095 SARGQ9BW04 601 aa9.76□□□□□ -0.85
HDAC6-222ENST00000478095 YIPF2Q9BWQ6 316 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms