RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 TFEBP19484 476 aa19■□□□□ 0.63
PDLIM1-202ENST00000477757 TRHRP34981 398 aaPredicted RBP19■□□□□ 0.63
PDLIM1-202ENST00000477757 HSD17B2P37059 387 aa19■□□□□ 0.63
PDLIM1-202ENST00000477757 BCL6P41182 706 aa19■□□□□ 0.63
PDLIM1-202ENST00000477757 CETN2P41208 172 aa19■□□□□ 0.63
PDLIM1-202ENST00000477757 MAGEA1P43355 309 aa19■□□□□ 0.63
PDLIM1-202ENST00000477757 MEOX1P50221 254 aa19■□□□□ 0.63
PDLIM1-202ENST00000477757 PNLIPRP1P54315 467 aa19■□□□□ 0.63
PDLIM1-202ENST00000477757 RWDD2BP57060 319 aa19■□□□□ 0.63
PDLIM1-202ENST00000477757 NSDHLQ15738 373 aa19■□□□□ 0.63
PDLIM1-202ENST00000477757 VN1R4Q7Z5H5 301 aa19■□□□□ 0.63
PDLIM1-202ENST00000477757 MPP5Q8N3R9 675 aa19■□□□□ 0.63
PDLIM1-202ENST00000477757 ELP5Q8TE02 316 aa19■□□□□ 0.63
PDLIM1-202ENST00000477757 ALPK1Q96QP1 1244 aa19■□□□□ 0.63
PDLIM1-202ENST00000477757 EBNA1BP2Q99848 306 aaKnown RBP19■□□□□ 0.63
PDLIM1-202ENST00000477757 ZNF358Q9NW07 568 aa19■□□□□ 0.63
PDLIM1-202ENST00000477757 ZNF839A8K0R7 811 aa18.99■□□□□ 0.63
PDLIM1-202ENST00000477757 MAGEB17A8MXT2 336 aa18.99■□□□□ 0.63
PDLIM1-202ENST00000477757 SGK494L7N484 410 aa18.99■□□□□ 0.63
PDLIM1-202ENST00000477757 CD3EAPO15446 510 aaKnown RBP18.99■□□□□ 0.63
PDLIM1-202ENST00000477757 CDC40O60508 579 aaKnown RBP eCLIP18.99■□□□□ 0.63
PDLIM1-202ENST00000477757 PRMT3O60678 531 aa18.99■□□□□ 0.63
PDLIM1-202ENST00000477757 PSIP1O75475 530 aaKnown RBP18.99■□□□□ 0.63
PDLIM1-202ENST00000477757 ITGA8P53708 1063 aa18.99■□□□□ 0.63
PDLIM1-202ENST00000477757 EIF3BP55884 814 aaKnown RBP18.99■□□□□ 0.63
PDLIM1-202ENST00000477757 ACTN3Q08043 901 aaPredicted RBP18.99■□□□□ 0.63
PDLIM1-202ENST00000477757 CTSL3PQ5NE16 218 aa18.99■□□□□ 0.63
PDLIM1-202ENST00000477757 TMEM214Q6NUQ4 689 aaKnown RBP18.99■□□□□ 0.63
PDLIM1-202ENST00000477757 ARHGAP11AQ6P4F7 1023 aa18.99■□□□□ 0.63
PDLIM1-202ENST00000477757 PPP1R21Q6ZMI0 780 aa18.99■□□□□ 0.63
PDLIM1-202ENST00000477757 ACAD11Q709F0 780 aa18.99■□□□□ 0.63
PDLIM1-202ENST00000477757 KIF2BQ8N4N8 673 aa18.99■□□□□ 0.63
PDLIM1-202ENST00000477757 PLPP5Q8NEB5 264 aa18.99■□□□□ 0.63
PDLIM1-202ENST00000477757 ALG3Q92685 438 aa18.99■□□□□ 0.63
PDLIM1-202ENST00000477757 TSLPQ969D9 159 aa18.99■□□□□ 0.63
PDLIM1-202ENST00000477757 LANCL2Q9NS86 450 aa18.99■□□□□ 0.63
PDLIM1-202ENST00000477757 TFR2Q9UP52 801 aa18.99■□□□□ 0.63
PDLIM1-202ENST00000477757 L3MBTL1Q9Y468 752 aa18.99■□□□□ 0.63
PDLIM1-202ENST00000477757 SMAPO00193 183 aa18.98■□□□□ 0.63
PDLIM1-202ENST00000477757 HS6ST1O60243 411 aa18.98■□□□□ 0.63
PDLIM1-202ENST00000477757 KIF5CO60282 957 aa18.98■□□□□ 0.63
PDLIM1-202ENST00000477757 SLC16A8O95907 504 aa18.98■□□□□ 0.63
PDLIM1-202ENST00000477757 RFC3P40938 356 aa18.98■□□□□ 0.63
PDLIM1-202ENST00000477757 GRIA1P42261 906 aa18.98■□□□□ 0.63
PDLIM1-202ENST00000477757 HLCSP50747 726 aa18.98■□□□□ 0.63
PDLIM1-202ENST00000477757 NUP107P57740 925 aa18.98■□□□□ 0.63
PDLIM1-202ENST00000477757 MLF1P58340 268 aa18.98■□□□□ 0.63
PDLIM1-202ENST00000477757 LTBQ06643 244 aa18.98■□□□□ 0.63
PDLIM1-202ENST00000477757 EMC4Q5J8M3 183 aa18.98■□□□□ 0.63
PDLIM1-202ENST00000477757 PPFIBP2Q8ND30 876 aa18.98■□□□□ 0.63
PDLIM1-202ENST00000477757 MYRIPQ8NFW9 859 aa18.98■□□□□ 0.63
PDLIM1-202ENST00000477757 C16orf52Q8NHV5 167 aa18.98■□□□□ 0.63
PDLIM1-202ENST00000477757 ZNF480Q8WV37 535 aa18.98■□□□□ 0.63
PDLIM1-202ENST00000477757 OR1F2PQ96R84 312 aa18.98■□□□□ 0.63
PDLIM1-202ENST00000477757 PKP4Q99569 1192 aa18.98■□□□□ 0.63
PDLIM1-202ENST00000477757 POLDIP3Q9BY77 421 aaKnown RBP18.98■□□□□ 0.63
PDLIM1-202ENST00000477757 RBCK1Q9BYM8 510 aa18.98■□□□□ 0.63
PDLIM1-202ENST00000477757 LIME1Q9H400 295 aa18.98■□□□□ 0.63
PDLIM1-202ENST00000477757 PHF3Q92576 2039 aaKnown RBP18.98■□□□□ 0.63
PDLIM1-202ENST00000477757 KCNE1BA0A087WTH5 132 aa18.97■□□□□ 0.63
PDLIM1-202ENST00000477757 E7ENX8 843 aa18.97■□□□□ 0.63
PDLIM1-202ENST00000477757 RDH16O75452 317 aa18.97■□□□□ 0.63
PDLIM1-202ENST00000477757 NDUFS3O75489 264 aa18.97■□□□□ 0.63
PDLIM1-202ENST00000477757 CDC123O75794 336 aaPredicted RBP18.97■□□□□ 0.63
PDLIM1-202ENST00000477757 CATP04040 527 aaKnown RBP18.97■□□□□ 0.63
PDLIM1-202ENST00000477757 OR4D2P58180 307 aa18.97■□□□□ 0.63
PDLIM1-202ENST00000477757 MPP1Q00013 466 aa18.97■□□□□ 0.63
PDLIM1-202ENST00000477757 TAP2Q03519 686 aa18.97■□□□□ 0.63
PDLIM1-202ENST00000477757 PMPCAQ10713 525 aa18.97■□□□□ 0.63
PDLIM1-202ENST00000477757 BIVMQ86UB2 503 aa18.97■□□□□ 0.63
PDLIM1-202ENST00000477757 PDSS2Q86YH6 399 aa18.97■□□□□ 0.63
PDLIM1-202ENST00000477757 SULF2Q8IWU5 870 aa18.97■□□□□ 0.63
PDLIM1-202ENST00000477757 ZFP62Q8NB50 900 aaPredicted RBP18.97■□□□□ 0.63
PDLIM1-202ENST00000477757 PPHLN1Q8NEY8 458 aaKnown RBP18.97■□□□□ 0.63
PDLIM1-202ENST00000477757 SLC35B2Q8TB61 432 aa18.97■□□□□ 0.63
PDLIM1-202ENST00000477757 RMND5BQ96G75 393 aaPredicted RBP18.97■□□□□ 0.63
PDLIM1-202ENST00000477757 BIRC8Q96P09 236 aa18.97■□□□□ 0.63
PDLIM1-202ENST00000477757 ANKHQ9HCJ1 492 aa18.97■□□□□ 0.63
PDLIM1-202ENST00000477757 GOLGA6L9A6NEM1 432 aa18.96■□□□□ 0.63
PDLIM1-202ENST00000477757 KLRC4-KLRK1H3BQV0 150 aa18.96■□□□□ 0.63
PDLIM1-202ENST00000477757 H7BY64 318 aa18.96■□□□□ 0.63
PDLIM1-202ENST00000477757 NIPSNAP2O75323 286 aa18.96■□□□□ 0.63
PDLIM1-202ENST00000477757 IL10P22301 178 aa18.96■□□□□ 0.63
PDLIM1-202ENST00000477757 DNASE1P24855 282 aa18.96■□□□□ 0.63
PDLIM1-202ENST00000477757 RPS15AP62244 130 aaKnown RBP18.96■□□□□ 0.63
PDLIM1-202ENST00000477757 VSTM4Q8IW00 320 aa18.96■□□□□ 0.63
PDLIM1-202ENST00000477757 ARMC10Q8N2F6 343 aa18.96■□□□□ 0.63
PDLIM1-202ENST00000477757 ZCCHC10Q8TBK6 192 aa18.96■□□□□ 0.63
PDLIM1-202ENST00000477757 PRAP1Q96NZ9 151 aa18.96■□□□□ 0.63
PDLIM1-202ENST00000477757 PANX2Q96RD6 677 aa18.96■□□□□ 0.63
PDLIM1-202ENST00000477757 MACROD1Q9BQ69 325 aa18.96■□□□□ 0.63
PDLIM1-202ENST00000477757 PLEKHA6Q9Y2H5 1048 aa18.96■□□□□ 0.63
PDLIM1-202ENST00000477757 GTF3C3Q9Y5Q9 886 aa18.96■□□□□ 0.63
PDLIM1-202ENST00000477757 JMJD1CQ15652 2540 aa18.95■□□□□ 0.62
PDLIM1-202ENST00000477757 SYCE3A1L190 88 aa18.95■□□□□ 0.62
PDLIM1-202ENST00000477757 PROM1O43490 865 aa18.95■□□□□ 0.62
PDLIM1-202ENST00000477757 PEX1O43933 1283 aa18.95■□□□□ 0.62
PDLIM1-202ENST00000477757 DLX5P56178 289 aa18.95■□□□□ 0.62
PDLIM1-202ENST00000477757 ADAM8P78325 824 aa18.95■□□□□ 0.62
PDLIM1-202ENST00000477757 KLF1Q13351 362 aaPredicted RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms