RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 SUN1O94901 812 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 SLC16A8O95907 504 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 TPOP07202 933 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 CTNNA2P26232 953 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 NMBRP28336 390 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 FMO4P31512 558 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 PTGS2P35354 604 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 COILP38432 576 aaPredicted RBP9.15□□□□□ -0.94
COL4A5-204ENST00000477429 MEOX1P50221 254 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 ITGA8P53708 1063 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 EIF3BP55884 814 aaKnown RBP9.15□□□□□ -0.94
COL4A5-204ENST00000477429 SLC26A5P58743 744 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 TAP2Q03519 686 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 PRDX1Q06830 199 aaKnown RBP9.15□□□□□ -0.94
COL4A5-204ENST00000477429 PMPCAQ10713 525 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 CDH17Q12864 832 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 TBX2Q13207 712 aaPredicted RBP9.15□□□□□ -0.94
COL4A5-204ENST00000477429 FAM53BQ14153 422 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 USP10Q14694 798 aaKnown RBP9.15□□□□□ -0.94
COL4A5-204ENST00000477429 SWT1Q5T5J6 900 aaKnown RBP9.15□□□□□ -0.94
COL4A5-204ENST00000477429 CES3Q6UWW8 571 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 MDGA2Q7Z553 956 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 CTAGE6Q86UF2 777 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 TMEM178AQ8NBL3 297 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 GIMAP7Q8NHV1 300 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 ZCCHC10Q8TBK6 192 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 ELP5Q8TE02 316 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 METTL21AQ8WXB1 218 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 SEC16BQ96JE7 1060 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 PWWP2AQ96N64 755 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 PRAP1Q96NZ9 151 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 ALS2CR12Q96Q35 445 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 OLFM1Q99784 485 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 ZNF559Q9BR84 538 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 DEPPQ9NTK1 212 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 CATSPERZQ9NTU4 200 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 ZNHIT6Q9NWK9 470 aaKnown RBP9.15□□□□□ -0.94
COL4A5-204ENST00000477429 SPATA7Q9P0W8 599 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 PACSIN2Q9UNF0 486 aaPredicted RBP9.15□□□□□ -0.94
COL4A5-204ENST00000477429 PLEKHA6Q9Y2H5 1048 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 L3MBTL1Q9Y468 752 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 TCAF1Q9Y4C2 921 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 PCDHA13Q9Y5I0 950 aa9.15□□□□□ -0.94
COL4A5-204ENST00000477429 ZNF407Q9C0G0 2248 aa9.15□□□□□ -0.95
COL4A5-204ENST00000477429 FEZF1A0PJY2 475 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 FAM221AA4D161 298 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 NDC80O14777 642 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 CD3EAPO15446 510 aaKnown RBP9.14□□□□□ -0.95
COL4A5-204ENST00000477429 PRPF4O43172 522 aaKnown RBP eCLIP9.14□□□□□ -0.95
COL4A5-204ENST00000477429 PROM1O43490 865 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 KLK8O60259 260 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 CDC40O60508 579 aaKnown RBP eCLIP9.14□□□□□ -0.95
COL4A5-204ENST00000477429 PSIP1O75475 530 aaKnown RBP9.14□□□□□ -0.95
COL4A5-204ENST00000477429 CTAG2O75638 210 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 NSA2O95478 260 aaKnown RBP9.14□□□□□ -0.95
COL4A5-204ENST00000477429 ZSCAN5DPP0CG00 497 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 EZRP15311 586 aaKnown RBP9.14□□□□□ -0.95
COL4A5-204ENST00000477429 TFEBP19484 476 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 RPS3P23396 243 aaKnown RBP eCLIP9.14□□□□□ -0.95
COL4A5-204ENST00000477429 ADRA1DP25100 572 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 CHRNB4P30926 498 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 RPA3P35244 121 aaPredicted RBP9.14□□□□□ -0.95
COL4A5-204ENST00000477429 BCL6P41182 706 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 PNLIPRP1P54315 467 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 MLF1P58340 268 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 GPR85P60893 370 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 ADAM8P78325 824 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 OLR1P78380 273 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 BTG2P78543 158 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 ABRAXAS2Q15018 415 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 TMED2Q15363 201 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 KLHL38Q2WGJ6 581 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 RTL6Q6ICC9 239 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 TMEM214Q6NUQ4 689 aaKnown RBP9.14□□□□□ -0.95
COL4A5-204ENST00000477429 C16orf47Q6ZP98 133 aaPredicted RBP9.14□□□□□ -0.95
COL4A5-204ENST00000477429 OTOAQ7RTW8 1153 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 RPS19BP1Q86WX3 136 aaKnown RBP9.14□□□□□ -0.95
COL4A5-204ENST00000477429 LRRC57Q8N9N7 239 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 SMPDL3AQ92484 453 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 LPGAT1Q92604 370 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 TM4SF19Q96DZ7 209 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 PEX11GQ96HA9 241 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 GPATCH1Q9BRR8 931 aaKnown RBP9.14□□□□□ -0.95
COL4A5-204ENST00000477429 KRTAP17-1Q9BYP8 105 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 LACRTQ9GZZ8 138 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 DEFB127Q9H1M4 99 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 TRIM45Q9H8W5 580 aaPredicted RBP9.14□□□□□ -0.95
COL4A5-204ENST00000477429 TREX1Q9NSU2 369 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 DNAJB12Q9NXW2 375 aaKnown RBP9.14□□□□□ -0.95
COL4A5-204ENST00000477429 COQ3Q9NZJ6 369 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 RIMKLBQ9ULI2 386 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 MED16Q9Y2X0 877 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 REXO2Q9Y3B8 237 aaKnown RBP9.14□□□□□ -0.95
COL4A5-204ENST00000477429 FAM215AQ9Y5M1 114 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 LIPGQ9Y5X9 500 aa9.14□□□□□ -0.95
COL4A5-204ENST00000477429 ANK2Q01484 3957 aa9.13□□□□□ -0.95
COL4A5-204ENST00000477429 GRID2IPA4D2P6 1211 aa9.13□□□□□ -0.95
COL4A5-204ENST00000477429 H0YIG0 161 aa9.13□□□□□ -0.95
COL4A5-204ENST00000477429 SLC16A5O15375 505 aa9.13□□□□□ -0.95
COL4A5-204ENST00000477429 PRKNO60260 465 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms