RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 GNRH1P01148 92 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 ZNF26P17031 533 aaPredicted RBP10.66□□□□□ -0.7
COL27A1-204ENST00000477421 AGXTP21549 392 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 CDH3P22223 829 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 PRMT2P55345 433 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 RPS3AP61247 264 aaKnown RBP10.66□□□□□ -0.7
COL27A1-204ENST00000477421 LSAMPQ13449 338 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 ARMCX4Q5H9R4 360 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 CLEC12AQ5QGZ9 265 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 PDZK1Q5T2W1 519 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 RSBN1Q5VWQ0 802 aaPredicted RBP10.66□□□□□ -0.7
COL27A1-204ENST00000477421 CD300LGQ6UXG3 332 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 ADAMTS15Q8TE58 950 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 TMEM203Q969S6 136 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 C17orf62Q9BQA9 187 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 ABCB9Q9NP78 766 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 ZNF232Q9UNY5 417 aa10.66□□□□□ -0.7
COL27A1-204ENST00000477421 RBMX2Q9Y388 322 aaKnown RBP10.66□□□□□ -0.7
COL27A1-204ENST00000477421 LSM1O15116 133 aaKnown RBP10.65□□□□□ -0.7
COL27A1-204ENST00000477421 PEX11BO96011 259 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 B3GALT4O96024 378 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 APODP05090 189 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 CCNYL3P0C7X3 344 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 SDC1P18827 310 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 IL12AP29459 219 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 GDI1P31150 447 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 CLDN8P56748 225 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 GRIK2Q13002 908 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 C4orf46Q504U0 113 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 SBSNQ6UWP8 590 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 UBASH3BQ8TF42 649 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 BTN2A2Q8WVV5 523 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 BRINP2Q9C0B6 783 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 ITM2CQ9NQX7 267 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 KLF15Q9UIH9 416 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 ZNF780BQ9Y6R6 833 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 HIDE1A8MVS5 230 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 CLDN25C9JDP6 229 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 TBX1O43435 398 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 NME6O75414 186 aaPredicted RBP10.65□□□□□ -0.7
COL27A1-204ENST00000477421 APOL3O95236 402 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 NPPAP01160 153 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 KELP23276 732 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 HTR1BP28222 390 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 CLCN7P51798 805 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 MC1RQ01726 317 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 PPIGQ13427 754 aaKnown RBP eCLIP10.65□□□□□ -0.78e-38■■■■□ 22.4
COL27A1-204ENST00000477421 DHCR24Q15392 516 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 LIMS2Q7Z4I7 341 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 REM2Q8IYK8 340 aaPredicted RBP10.65□□□□□ -0.7
COL27A1-204ENST00000477421 CDK20Q8IZL9 346 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 TFAP2CQ92754 450 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 ZNF597Q96LX8 424 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 F2RL3Q96RI0 385 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 WDR26Q9H7D7 661 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 CARS2Q9HA77 564 aaKnown RBP10.65□□□□□ -0.7
COL27A1-204ENST00000477421 AGPAT4Q9NRZ5 378 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 ARMC1Q9NVT9 282 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 ATG2BQ96BY7 2078 aa10.65□□□□□ -0.7
COL27A1-204ENST00000477421 FEZF1A0PJY2 475 aa10.65□□□□□ -0.71
COL27A1-204ENST00000477421 AP3D1O14617 1153 aa10.65□□□□□ -0.71
COL27A1-204ENST00000477421 PDPK1O15530 556 aa10.65□□□□□ -0.71
COL27A1-204ENST00000477421 CCNB2O95067 398 aa10.65□□□□□ -0.71
COL27A1-204ENST00000477421 GGT1P19440 569 aa10.65□□□□□ -0.71
COL27A1-204ENST00000477421 FPR1P21462 350 aa10.65□□□□□ -0.71
COL27A1-204ENST00000477421 CD47Q08722 323 aa10.65□□□□□ -0.71
COL27A1-204ENST00000477421 GPM6BQ13491 265 aa10.65□□□□□ -0.71
COL27A1-204ENST00000477421 VRK3Q8IV63 474 aa10.65□□□□□ -0.71
COL27A1-204ENST00000477421 FAM118AQ9NWS6 357 aa10.65□□□□□ -0.71
COL27A1-204ENST00000477421 ERVK-18Q9QC07 812 aa10.65□□□□□ -0.71
COL27A1-204ENST00000477421 OR7A17O14581 309 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 PENKP01210 267 aaPredicted RBP10.64□□□□□ -0.71
COL27A1-204ENST00000477421 TLX1P31314 330 aaPredicted RBP10.64□□□□□ -0.71
COL27A1-204ENST00000477421 ACTR1BP42025 376 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 ACTR1AP61163 376 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 TUBA4AP68366 448 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 PDGFRLQ15198 375 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 TIMM50Q3ZCQ8 353 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 PLEKHS1Q5SXH7 462 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 ZNF773Q6PK81 442 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 SMARCD3Q6STE5 483 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 ZNF730Q6ZMV8 503 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 OR9A1PQ8NGU1 263 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 SLC5A11Q8WWX8 675 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 GTF2H4Q92759 462 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 RNFT2Q96EX2 444 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 LMLNQ96KR4 655 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 TTLL2Q9BWV7 592 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 POLR2J3Q9H1A7 115 aaKnown RBP10.64□□□□□ -0.71
COL27A1-204ENST00000477421 MIR1-1HGQ9H1L0 117 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 ADAP2Q9NPF8 381 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 DNAAF2Q9NVR5 837 aaKnown RBP10.64□□□□□ -0.71
COL27A1-204ENST00000477421 FAM120CQ9NX05 1096 aaKnown RBP10.64□□□□□ -0.71
COL27A1-204ENST00000477421 RIMKLBQ9ULI2 386 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 PHF24Q9UPV7 400 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 SLC27A6Q9Y2P4 619 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 ARHGEF33A8MVX0 844 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 EFCAB9A8MZ26 197 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 MAGEB3O15480 346 aa10.64□□□□□ -0.71
COL27A1-204ENST00000477421 OR10H2O60403 315 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms