RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 CDC123O75794 336 aaPredicted RBP2.37□□□□□ -2.03
XRN1-211ENST00000477237 ATP5HO75947 161 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 SEMA3DO95025 777 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 SNAPINO95295 136 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 PRAMEF12O95522 483 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 ZCCHC18P0CG32 403 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 CSH1P0DML2 217 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 CSH2P0DML3 217 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 KRT3P12035 628 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 GJA1P17302 382 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 RPA1P27694 616 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 PTPN4P29074 926 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 CRABP2P29373 138 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 HMOX2P30519 316 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 RRM2P31350 389 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 RYKP34925 604 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 NNMTP40261 264 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 ETV5P41161 510 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 CRKLP46109 303 aaKnown RBP2.37□□□□□ -2.03
XRN1-211ENST00000477237 RGS7P49802 495 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 CCR5P51681 352 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 ATXN3P54252 364 aaPredicted RBP2.37□□□□□ -2.03
XRN1-211ENST00000477237 MTTPP55157 894 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 CASP9P55211 416 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 ARF3P61204 181 aaPredicted RBP2.37□□□□□ -2.03
XRN1-211ENST00000477237 VAMP2P63027 116 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 ARF1P84077 181 aaKnown RBP2.37□□□□□ -2.03
XRN1-211ENST00000477237 KLC1Q07866 573 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 GOLGA8DPQ0D2H9 430 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 FADDQ13158 208 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 GTF2H2Q13888 395 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 RRS1Q15050 365 aaKnown RBP2.37□□□□□ -2.03
XRN1-211ENST00000477237 ZMYND11Q15326 602 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 CHRNA6Q15825 494 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 TYSND1Q2T9J0 566 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 ZFP69Q49AA0 526 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 KCTD21Q4G0X4 260 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 TTMPQ5BVD1 217 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 ZNF805Q5CZA5 627 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 TEX35Q5T0J7 233 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 RARS2Q5T160 578 aaKnown RBP2.37□□□□□ -2.03
XRN1-211ENST00000477237 CCNYL2Q5T2Q4 361 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 MPP7Q5T2T1 576 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 DUPD1Q68J44 220 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 PTRHD1Q6GMV3 140 aaKnown RBP2.37□□□□□ -2.03
XRN1-211ENST00000477237 TRNP1Q6NT89 227 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 GTF2H2CQ6P1K8 395 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 TTC23LQ6PF05 361 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 TRAT1Q6PIZ9 186 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 SLC22A25Q6T423 547 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 TPGS1Q6ZTW0 290 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 TMTC3Q6ZXV5 915 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 TAF8Q7Z7C8 310 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 ZNF554Q86TJ5 538 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 TBC1D26Q86UD7 250 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 CDKL3Q8IVW4 592 aaPredicted RBP2.37□□□□□ -2.03
XRN1-211ENST00000477237 C1orf87Q8N0U7 546 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 ARHGAP18Q8N392 663 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 ARFGAP2Q8N6H7 521 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 RTL3Q8N8U3 475 aaKnown RBP2.37□□□□□ -2.03
XRN1-211ENST00000477237 ZNF397Q8NF99 534 aaPredicted RBP2.37□□□□□ -2.03
XRN1-211ENST00000477237 NEK11Q8NG66 645 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 WDR20Q8TBZ3 569 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 ADAMTS16Q8TE57 1224 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 DQX1Q8TE96 717 aaKnown RBP2.37□□□□□ -2.03
XRN1-211ENST00000477237 SCFD1Q8WVM8 642 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 SLC13A3Q8WWT9 602 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 NT5C3BQ969T7 300 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 PTERQ96BW5 349 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 KTI12Q96EK9 354 aaPredicted RBP2.37□□□□□ -2.03
XRN1-211ENST00000477237 ERO1AQ96HE7 468 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 CEP170P1Q96L14 293 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 TSNARE1Q96NA8 513 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 USP28Q96RU2 1077 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 TESK2Q96S53 571 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 MTERF1Q99551 399 aaKnown RBP2.37□□□□□ -2.03
XRN1-211ENST00000477237 CMKLR1Q99788 373 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 DHRS9Q9BPW9 319 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 SELENOSQ9BQE4 189 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 CCM2Q9BSQ5 444 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 THUMPD3Q9BV44 507 aaKnown RBP2.37□□□□□ -2.03
XRN1-211ENST00000477237 ITPAQ9BY32 194 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 LHX5Q9H2C1 402 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 CENPHQ9H3R5 247 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 OPA3Q9H6K4 179 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 FKRPQ9H9S5 495 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 PCDH9Q9HC56 1237 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 MRPL40Q9NQ50 206 aaKnown RBP2.37□□□□□ -2.03
XRN1-211ENST00000477237 C12orf4Q9NQ89 552 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 KRT84Q9NSB2 600 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 RCOR3Q9P2K3 495 aaPredicted RBP2.37□□□□□ -2.03
XRN1-211ENST00000477237 STX18Q9P2W9 335 aaKnown RBP2.37□□□□□ -2.03
XRN1-211ENST00000477237 MORF4L1Q9UBU8 362 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 TRIM10Q9UDY6 481 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 SEC63Q9UGP8 760 aaKnown RBP2.37□□□□□ -2.03
XRN1-211ENST00000477237 APPL1Q9UKG1 709 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 ITGA11Q9UKX5 1188 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 CAMK2AQ9UQM7 478 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 MTMR6Q9Y217 621 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 DNAJC16Q9Y2G8 782 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms