RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 DEFB133Q30KQ1 61 aa13.83□□□□□ -0.19
COL4A6-206ENST00000477085 SPIN4Q56A73 249 aa13.83□□□□□ -0.19
COL4A6-206ENST00000477085 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.83□□□□□ -0.19
COL4A6-206ENST00000477085 DEPDC1Q5TB30 811 aa13.83□□□□□ -0.19
COL4A6-206ENST00000477085 LYSMD4Q5XG99 296 aa13.83□□□□□ -0.19
COL4A6-206ENST00000477085 DLEU7Q6UYE1 221 aa13.83□□□□□ -0.19
COL4A6-206ENST00000477085 UBE3DQ7Z6J8 389 aa13.83□□□□□ -0.19
COL4A6-206ENST00000477085 SLC9B2Q86UD5 537 aa13.83□□□□□ -0.19
COL4A6-206ENST00000477085 PAQR7Q86WK9 346 aa13.83□□□□□ -0.19
COL4A6-206ENST00000477085 C17orf82Q86X59 251 aaPredicted RBP13.83□□□□□ -0.19
COL4A6-206ENST00000477085 RNF148Q8N7C7 305 aa13.83□□□□□ -0.19
COL4A6-206ENST00000477085 FCRL4Q96PJ5 515 aa13.83□□□□□ -0.19
COL4A6-206ENST00000477085 SERPINI1Q99574 410 aa13.83□□□□□ -0.19
COL4A6-206ENST00000477085 SARGQ9BW04 601 aa13.83□□□□□ -0.19
COL4A6-206ENST00000477085 TRIM8Q9BZR9 551 aa13.83□□□□□ -0.19
COL4A6-206ENST00000477085 LHX9Q9NQ69 397 aa13.83□□□□□ -0.19
COL4A6-206ENST00000477085 EVA1BQ9NVM1 165 aa13.83□□□□□ -0.19
COL4A6-206ENST00000477085 GMPR2Q9P2T1 348 aaKnown RBP13.83□□□□□ -0.19
COL4A6-206ENST00000477085 SPASTQ9UBP0 616 aa13.83□□□□□ -0.19
COL4A6-206ENST00000477085 BTBD3Q9Y2F9 522 aa13.83□□□□□ -0.19
COL4A6-206ENST00000477085 NEUROG3Q9Y4Z2 214 aa13.83□□□□□ -0.19
COL4A6-206ENST00000477085 LMO7DNF2Z398 122 aa13.83□□□□□ -0.2
COL4A6-206ENST00000477085 RTCAO00442 366 aaKnown RBP13.83□□□□□ -0.2
COL4A6-206ENST00000477085 PLPP1O14494 284 aa13.83□□□□□ -0.2
COL4A6-206ENST00000477085 ANXA4P09525 319 aaPredicted RBP13.83□□□□□ -0.2
COL4A6-206ENST00000477085 GIMD1P0DJR0 217 aa13.83□□□□□ -0.2
COL4A6-206ENST00000477085 MAPK1P28482 360 aa13.83□□□□□ -0.2
COL4A6-206ENST00000477085 TIA1P31483 386 aaKnown RBP eCLIP13.83□□□□□ -0.2
COL4A6-206ENST00000477085 HNRNPH1P31943 449 aaKnown RBP13.83□□□□□ -0.2
COL4A6-206ENST00000477085 MSX2P35548 267 aaPredicted RBP13.83□□□□□ -0.2
COL4A6-206ENST00000477085 CTSKP43235 329 aa13.83□□□□□ -0.2
COL4A6-206ENST00000477085 C21orf59P57076 290 aa13.83□□□□□ -0.2
COL4A6-206ENST00000477085 HNRNPKP61978 463 aaKnown RBP eCLIP13.83□□□□□ -0.2
COL4A6-206ENST00000477085 BNIP3Q12983 259 aa13.83□□□□□ -0.2
COL4A6-206ENST00000477085 ZIC1Q15915 447 aa13.83□□□□□ -0.2
COL4A6-206ENST00000477085 PLK5Q496M5 336 aa13.83□□□□□ -0.2
COL4A6-206ENST00000477085 KHDRBS2Q5VWX1 349 aaKnown RBP13.83□□□□□ -0.2
COL4A6-206ENST00000477085 FCRL6Q6DN72 434 aa13.83□□□□□ -0.2
COL4A6-206ENST00000477085 FBXO42Q6P3S6 717 aa13.83□□□□□ -0.2
COL4A6-206ENST00000477085 BNC2Q6ZN30 1099 aaPredicted RBP13.83□□□□□ -0.2
COL4A6-206ENST00000477085 GKN2Q86XP6 184 aa13.83□□□□□ -0.2
COL4A6-206ENST00000477085 SYT12Q8IV01 421 aa13.83□□□□□ -0.2
COL4A6-206ENST00000477085 SLC25A45Q8N413 288 aa13.83□□□□□ -0.2
COL4A6-206ENST00000477085 PCYOX1LQ8NBM8 494 aa13.83□□□□□ -0.2
COL4A6-206ENST00000477085 GLB1L3Q8NCI6 653 aaPredicted RBP13.83□□□□□ -0.2
COL4A6-206ENST00000477085 ROPN1LQ96C74 230 aa13.83□□□□□ -0.2
COL4A6-206ENST00000477085 LRRC58Q96CX6 371 aa13.83□□□□□ -0.2
COL4A6-206ENST00000477085 KLHL31Q9H511 634 aa13.83□□□□□ -0.2
COL4A6-206ENST00000477085 TMEM181Q9P2C4 612 aa13.83□□□□□ -0.2
COL4A6-206ENST00000477085 LEF1Q9UJU2 399 aaPredicted RBP13.83□□□□□ -0.2
COL4A6-206ENST00000477085 CROTQ9UKG9 612 aa13.83□□□□□ -0.2
COL4A6-206ENST00000477085 PRPF19Q9UMS4 504 aaKnown RBP13.83□□□□□ -0.2
COL4A6-206ENST00000477085 GSAPA4D1B5 854 aa13.82□□□□□ -0.2
COL4A6-206ENST00000477085 TNFSF14O43557 240 aa13.82□□□□□ -0.2
COL4A6-206ENST00000477085 AKAP10O43572 662 aa13.82□□□□□ -0.2
COL4A6-206ENST00000477085 PCDH7O60245 1069 aa13.82□□□□□ -0.2
COL4A6-206ENST00000477085 PGRP06401 933 aa13.82□□□□□ -0.2
COL4A6-206ENST00000477085 KLK1P06870 262 aa13.82□□□□□ -0.2
COL4A6-206ENST00000477085 TYRP1P17643 537 aa13.82□□□□□ -0.2
COL4A6-206ENST00000477085 SNRPNP63162 240 aaKnown RBP13.82□□□□□ -0.2
COL4A6-206ENST00000477085 PLIN5Q00G26 463 aa13.82□□□□□ -0.2
COL4A6-206ENST00000477085 UGT8Q16880 541 aa13.82□□□□□ -0.2
COL4A6-206ENST00000477085 TJAP1Q5JTD0 557 aa13.82□□□□□ -0.2
COL4A6-206ENST00000477085 OGFOD3Q6PK18 319 aa13.82□□□□□ -0.2
COL4A6-206ENST00000477085 ARHGAP24Q8N264 748 aa13.82□□□□□ -0.2
COL4A6-206ENST00000477085 MINDY1Q8N5J2 469 aa13.82□□□□□ -0.2
COL4A6-206ENST00000477085 DPP10Q8N608 796 aa13.82□□□□□ -0.2
COL4A6-206ENST00000477085 AMER3Q8N944 861 aa13.82□□□□□ -0.2
COL4A6-206ENST00000477085 DTWD2Q8NBA8 298 aa13.82□□□□□ -0.2
COL4A6-206ENST00000477085 OR7A2PQ8NGA2 310 aa13.82□□□□□ -0.2
COL4A6-206ENST00000477085 RSC1A1Q92681 617 aa13.82□□□□□ -0.2
COL4A6-206ENST00000477085 GTF2H4Q92759 462 aa13.82□□□□□ -0.2
COL4A6-206ENST00000477085 TESCQ96BS2 214 aa13.82□□□□□ -0.2
COL4A6-206ENST00000477085 KLHL25Q9H0H3 589 aa13.82□□□□□ -0.2
COL4A6-206ENST00000477085 PRM3Q9NNZ6 103 aa13.82□□□□□ -0.2
COL4A6-206ENST00000477085 HRASLS2Q9NWW9 162 aa13.82□□□□□ -0.2
COL4A6-206ENST00000477085 ADGRE2Q9UHX3 823 aa13.82□□□□□ -0.2
COL4A6-206ENST00000477085 PILRBQ9UKJ0 227 aa13.82□□□□□ -0.2
COL4A6-206ENST00000477085 ERVK-11Q9UQG0 969 aa13.82□□□□□ -0.2
COL4A6-206ENST00000477085 WDFY4Q6ZS81 3184 aa13.82□□□□□ -0.2
COL4A6-206ENST00000477085 VPS13AQ96RL7 3174 aa13.82□□□□□ -0.2
COL4A6-206ENST00000477085 THADAQ6YHU6 1953 aa13.82□□□□□ -0.2
COL4A6-206ENST00000477085 OR2A25A4D2G3 310 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 LRIT2A6NDA9 550 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 PRORSD1PA6NEY8 169 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 C4orf51C9J302 202 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 MAP3K7O43318 606 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 CTSVO60911 334 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 CCNDBP1O95273 360 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 IL6P05231 212 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 MAGP20916 626 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 SLC6A2P23975 617 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 TPP2P29144 1249 aaPredicted RBP13.81□□□□□ -0.2
COL4A6-206ENST00000477085 BSGP35613 385 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 FASLGP48023 281 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 WNT3P56703 355 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 C21orf58P58505 322 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 MS4A2Q01362 244 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 NFYCQ13952 458 aa13.81□□□□□ -0.2
COL4A6-206ENST00000477085 HKDC1Q2TB90 917 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms