RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 BCL6P41182 706 aa10.67□□□□□ -0.7
BRCA1-213ENST00000476777 CYB561P49447 251 aa10.67□□□□□ -0.7
BRCA1-213ENST00000476777 SLC26A5P58743 744 aa10.67□□□□□ -0.7
BRCA1-213ENST00000476777 RHAGQ02094 409 aa10.67□□□□□ -0.7
BRCA1-213ENST00000476777 ACTN3Q08043 901 aaPredicted RBP10.67□□□□□ -0.7
BRCA1-213ENST00000476777 TSTA3Q13630 321 aaPredicted RBP10.67□□□□□ -0.7
BRCA1-213ENST00000476777 GBX1Q14549 363 aa10.67□□□□□ -0.7
BRCA1-213ENST00000476777 USP10Q14694 798 aaKnown RBP10.67□□□□□ -0.7
BRCA1-213ENST00000476777 ARHGAP19Q14CB8 494 aa10.67□□□□□ -0.7
BRCA1-213ENST00000476777 ABRAXAS2Q15018 415 aa10.67□□□□□ -0.7
BRCA1-213ENST00000476777 NSDHLQ15738 373 aa10.67□□□□□ -0.7
BRCA1-213ENST00000476777 CEBPEQ15744 281 aa10.67□□□□□ -0.7
BRCA1-213ENST00000476777 EMC4Q5J8M3 183 aa10.67□□□□□ -0.7
BRCA1-213ENST00000476777 VN1R4Q7Z5H5 301 aa10.67□□□□□ -0.7
BRCA1-213ENST00000476777 KIF2BQ8N4N8 673 aa10.67□□□□□ -0.7
BRCA1-213ENST00000476777 POGLUT1Q8NBL1 392 aa10.67□□□□□ -0.7
BRCA1-213ENST00000476777 PLPP5Q8NEB5 264 aa10.67□□□□□ -0.7
BRCA1-213ENST00000476777 ELP5Q8TE02 316 aa10.67□□□□□ -0.7
BRCA1-213ENST00000476777 ALG3Q92685 438 aa10.67□□□□□ -0.7
BRCA1-213ENST00000476777 PEX13Q92968 403 aa10.67□□□□□ -0.7
BRCA1-213ENST00000476777 SEC16BQ96JE7 1060 aa10.67□□□□□ -0.7
BRCA1-213ENST00000476777 PKP4Q99569 1192 aa10.67□□□□□ -0.7
BRCA1-213ENST00000476777 LPAR4Q99677 370 aa10.67□□□□□ -0.7
BRCA1-213ENST00000476777 TP63Q9H3D4 680 aaPredicted RBP10.67□□□□□ -0.7
BRCA1-213ENST00000476777 SLC24A3Q9HC58 644 aa10.67□□□□□ -0.7
BRCA1-213ENST00000476777 CATSPERZQ9NTU4 200 aa10.67□□□□□ -0.7
BRCA1-213ENST00000476777 ZNF358Q9NW07 568 aa10.67□□□□□ -0.7
BRCA1-213ENST00000476777 TSR3Q9UJK0 312 aaKnown RBP10.67□□□□□ -0.7
BRCA1-213ENST00000476777 ANAPC5Q9UJX4 755 aa10.67□□□□□ -0.7
BRCA1-213ENST00000476777 TCAF1Q9Y4C2 921 aa10.67□□□□□ -0.7
BRCA1-213ENST00000476777 HIVEP2P31629 2446 aa10.67□□□□□ -0.7
BRCA1-213ENST00000476777 USP27XA6NNY8 438 aa10.66□□□□□ -0.7
BRCA1-213ENST00000476777 ERI2A8K979 691 aaKnown RBP10.66□□□□□ -0.7
BRCA1-213ENST00000476777 SGK494L7N484 410 aa10.66□□□□□ -0.7
BRCA1-213ENST00000476777 HS6ST1O60243 411 aa10.66□□□□□ -0.7
BRCA1-213ENST00000476777 KLK8O60259 260 aa10.66□□□□□ -0.7
BRCA1-213ENST00000476777 CDC40O60508 579 aaKnown RBP eCLIP10.66□□□□□ -0.7
BRCA1-213ENST00000476777 CCNDBP1O95273 360 aa10.66□□□□□ -0.7
BRCA1-213ENST00000476777 GAS8O95995 478 aa10.66□□□□□ -0.7
BRCA1-213ENST00000476777 IL1RNP18510 177 aa10.66□□□□□ -0.7
BRCA1-213ENST00000476777 TFEBP19484 476 aa10.66□□□□□ -0.7
BRCA1-213ENST00000476777 ATP5DP30049 168 aa10.66□□□□□ -0.7
BRCA1-213ENST00000476777 TRHRP34981 398 aaPredicted RBP10.66□□□□□ -0.7
BRCA1-213ENST00000476777 MAGEA1P43355 309 aa10.66□□□□□ -0.7
BRCA1-213ENST00000476777 MEOX1P50221 254 aa10.66□□□□□ -0.7
BRCA1-213ENST00000476777 PNLIPRP1P54315 467 aa10.66□□□□□ -0.7
BRCA1-213ENST00000476777 EIF3BP55884 814 aaKnown RBP10.66□□□□□ -0.7
BRCA1-213ENST00000476777 NUP107P57740 925 aa10.66□□□□□ -0.7
BRCA1-213ENST00000476777 ABATP80404 500 aa10.66□□□□□ -0.7
BRCA1-213ENST00000476777 PMPCAQ10713 525 aa10.66□□□□□ -0.7
BRCA1-213ENST00000476777 CMPK2Q5EBM0 449 aa10.66□□□□□ -0.7
BRCA1-213ENST00000476777 CTSL3PQ5NE16 218 aa10.66□□□□□ -0.7
BRCA1-213ENST00000476777 TMEM214Q6NUQ4 689 aaKnown RBP10.66□□□□□ -0.7
BRCA1-213ENST00000476777 ADCK2Q7Z695 626 aa10.66□□□□□ -0.7
BRCA1-213ENST00000476777 LRRC6Q86X45 466 aa10.66□□□□□ -0.7
BRCA1-213ENST00000476777 SULF2Q8IWU5 870 aa10.66□□□□□ -0.7
BRCA1-213ENST00000476777 CLYBLQ8N0X4 340 aa10.66□□□□□ -0.7
BRCA1-213ENST00000476777 MCOLN3Q8TDD5 553 aa10.66□□□□□ -0.7
BRCA1-213ENST00000476777 TSLPQ969D9 159 aa10.66□□□□□ -0.7
BRCA1-213ENST00000476777 BIRC8Q96P09 236 aa10.66□□□□□ -0.7
BRCA1-213ENST00000476777 MACROD1Q9BQ69 325 aa10.66□□□□□ -0.7
BRCA1-213ENST00000476777 LANCL2Q9NS86 450 aa10.66□□□□□ -0.7
BRCA1-213ENST00000476777 L3MBTL1Q9Y468 752 aa10.66□□□□□ -0.7
BRCA1-213ENST00000476777 KCNE1BA0A087WTH5 132 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 FAM237BA0A1B0GVD1 139 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 MAGEB17A8MXT2 336 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 E7ENX8 843 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 H7BY64 318 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 PROM1O43490 865 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 PRMT3O60678 531 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 PSIP1O75475 530 aaKnown RBP10.65□□□□□ -0.7
BRCA1-213ENST00000476777 CDC123O75794 336 aaPredicted RBP10.65□□□□□ -0.7
BRCA1-213ENST00000476777 SLC16A8O95907 504 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 HSD17B2P37059 387 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 HLCSP50747 726 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 NR0B1P51843 470 aaKnown RBP10.65□□□□□ -0.7
BRCA1-213ENST00000476777 ITGA8P53708 1063 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 DLX5P56178 289 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 RWDD2BP57060 319 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 MLF1P58340 268 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 ADAM8P78325 824 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 TAP2Q03519 686 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 LTBQ06643 244 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 ARHGAP11AQ6P4F7 1023 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 PPP1R21Q6ZMI0 780 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 PDSS2Q86YH6 399 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 VSTM4Q8IW00 320 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 LRRC56Q8IYG6 542 aaPredicted RBP10.65□□□□□ -0.7
BRCA1-213ENST00000476777 MPP5Q8N3R9 675 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 ZFP62Q8NB50 900 aaPredicted RBP10.65□□□□□ -0.7
BRCA1-213ENST00000476777 PPFIBP2Q8ND30 876 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 OR52N2Q8NGI0 321 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 C16orf52Q8NHV5 167 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 SLC35B2Q8TB61 432 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 ZNF480Q8WV37 535 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 TMEM125Q96AQ2 219 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 CCDC138Q96M89 665 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 PRAP1Q96NZ9 151 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 ALPK1Q96QP1 1244 aa10.65□□□□□ -0.7
BRCA1-213ENST00000476777 EBNA1BP2Q99848 306 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms