RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 GEMIN8Q9NWZ8 242 aaKnown RBP6.68□□□□□ -1.34
LIMD1-204ENST00000474665 SOHLH2Q9NX45 425 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 SLC39A1Q9NY26 324 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 GRID1Q9ULK0 1009 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 ZNF490Q9ULM2 529 aaPredicted RBP6.68□□□□□ -1.34
LIMD1-204ENST00000474665 SNX7Q9UNH6 387 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 PCDHGA3Q9Y5H0 932 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 LRBAP50851 2863 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 RP1L1Q8IWN7 2480 aaPredicted RBP6.68□□□□□ -1.34
LIMD1-204ENST00000474665 BOD1L1Q8NFC6 3051 aa6.68□□□□□ -1.34
LIMD1-204ENST00000474665 NUP214P35658 2090 aaPredicted RBP6.67□□□□□ -1.34
LIMD1-204ENST00000474665 NBASA2RRP1 2371 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 A1L4Q6 167 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 K7EPI3 171 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 UBFD1O14562 309 aaKnown RBP6.67□□□□□ -1.34
LIMD1-204ENST00000474665 POLR1CO15160 346 aaPredicted RBP6.67□□□□□ -1.34
LIMD1-204ENST00000474665 NVLO15381 856 aaKnown RBP6.67□□□□□ -1.34
LIMD1-204ENST00000474665 EFSO43281 561 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 CCNT2O60583 730 aaKnown RBP6.67□□□□□ -1.34
LIMD1-204ENST00000474665 DLGAP3O95886 979 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 MYZAPP0CAP1 466 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 C1GALT1C1LP0DN25 315 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 CPA3P15088 417 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 TSPAN8P19075 237 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 IMPDH1P20839 514 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 ATP5F1P24539 256 aaPredicted RBP6.67□□□□□ -1.34
LIMD1-204ENST00000474665 ALDH3A1P30838 453 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 SLC5A2P31639 672 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 MLLT3P42568 568 aaPredicted RBP6.67□□□□□ -1.34
LIMD1-204ENST00000474665 SCTRP47872 440 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 CCR8P51685 355 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 MAPK10P53779 464 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 WDR4P57081 412 aaKnown RBP6.67□□□□□ -1.34
LIMD1-204ENST00000474665 MAGOHP61326 146 aaKnown RBP6.67□□□□□ -1.34
LIMD1-204ENST00000474665 HERVK_113P63132 956 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 REEP5Q00765 189 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 FOXM1Q08050 763 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 HYAL2Q12891 473 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 GTF2H2Q13888 395 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 DOC2AQ14183 400 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 IL11RAQ14626 422 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 PDK4Q16654 411 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 PRTGQ2VWP7 1150 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 CCDC153Q494R4 210 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.67□□□□□ -1.34
LIMD1-204ENST00000474665 ZNF678Q5SXM1 525 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 ZNF385CQ66K41 422 aaPredicted RBP6.67□□□□□ -1.34
LIMD1-204ENST00000474665 ATG9BQ674R7 924 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 LCN10Q6JVE6 187 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 GTF2H2CQ6P1K8 395 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 LRRC70Q7Z2Q7 622 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 TICAM1Q8IUC6 712 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 C10orf107Q8IVU9 208 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 TEX9Q8N6V9 391 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 CREB3L4Q8TEY5 395 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 TM4SF19Q96DZ7 209 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 L3HYPDHQ96EM0 354 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 C10orf90Q96M02 699 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 ZFYVE21Q9BQ24 234 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 MECRQ9BV79 373 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 DDA1Q9BW61 102 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 GATA5Q9BWX5 397 aaPredicted RBP6.67□□□□□ -1.34
LIMD1-204ENST00000474665 ERVK-6Q9BXR3 956 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 GSTO2Q9H4Y5 243 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 CNOT10Q9H9A5 744 aaKnown RBP6.67□□□□□ -1.34
LIMD1-204ENST00000474665 PELI2Q9HAT8 420 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 SSU72Q9NP77 194 aaKnown RBP6.67□□□□□ -1.34
LIMD1-204ENST00000474665 ARGLU1Q9NWB6 273 aaPredicted RBP6.67□□□□□ -1.34
LIMD1-204ENST00000474665 OXSMQ9NWU1 459 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 SENP1Q9P0U3 644 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 COPG2Q9UBF2 871 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 PLCL2Q9UPR0 1127 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 MRPS2Q9Y399 296 aaKnown RBP6.67□□□□□ -1.34
LIMD1-204ENST00000474665 RNF11Q9Y3C5 154 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 PCDHGA7Q9Y5G6 932 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 PCDHGA4Q9Y5G9 962 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 ACTL7BQ9Y614 415 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 KCNE2Q9Y6J6 123 aa6.67□□□□□ -1.34
LIMD1-204ENST00000474665 SPTBN1Q01082 2364 aaKnown RBP6.66□□□□□ -1.34
LIMD1-204ENST00000474665 TRBC2A0A5B9 178 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 FITM1A5D6W6 292 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 PABPN1LA6NDY0 278 aaKnown RBP6.66□□□□□ -1.34
LIMD1-204ENST00000474665 C4orf51C9J302 202 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 PRPF4O43172 522 aaKnown RBP eCLIP6.66□□□□□ -1.34
LIMD1-204ENST00000474665 ZNF749O43361 778 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 SMIM24O75264 130 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 CCNDBP1O95273 360 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 S100BP04271 92 aaPredicted RBP6.66□□□□□ -1.34
LIMD1-204ENST00000474665 BPGMP07738 259 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 JMJD7P0C870 316 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 MYL2P10916 166 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 EZRP15311 586 aaKnown RBP6.66□□□□□ -1.34
LIMD1-204ENST00000474665 EPB42P16452 691 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 GNAZP19086 355 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 HRH2P25021 359 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 RORAP35398 523 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 SERPINB4P48594 390 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 ARL4DP49703 201 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 NAGLUP54802 743 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 VSX2P58304 361 aaPredicted RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms