RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 RTCAO00442 366 aaKnown RBP17.26■□□□□ 0.35
VARS2-206ENST00000473916 KLK1P06870 262 aa17.26■□□□□ 0.35
VARS2-206ENST00000473916 RGS19P49795 217 aa17.26■□□□□ 0.35
VARS2-206ENST00000473916 CSNK1G2P78368 415 aa17.26■□□□□ 0.35
VARS2-206ENST00000473916 ZNF385BQ569K4 471 aa17.26■□□□□ 0.35
VARS2-206ENST00000473916 LRIF1Q5T3J3 769 aa17.26■□□□□ 0.35
VARS2-206ENST00000473916 GALNT18Q6P9A2 607 aa17.26■□□□□ 0.35
VARS2-206ENST00000473916 ABI3BPQ7Z7G0 1075 aa17.26■□□□□ 0.35
VARS2-206ENST00000473916 FAM9CQ8IZT9 166 aa17.26■□□□□ 0.35
VARS2-206ENST00000473916 FBXL6Q8N531 539 aa17.26■□□□□ 0.35
VARS2-206ENST00000473916 DTWD1Q8N5C7 304 aa17.26■□□□□ 0.35
VARS2-206ENST00000473916 TMEM102Q8N9M5 508 aaPredicted RBP17.26■□□□□ 0.35
VARS2-206ENST00000473916 OR4K1Q8NGD4 311 aa17.26■□□□□ 0.35
VARS2-206ENST00000473916 NAF1Q96HR8 494 aaKnown RBP17.26■□□□□ 0.35
VARS2-206ENST00000473916 ITCHQ96J02 903 aa17.26■□□□□ 0.35
VARS2-206ENST00000473916 F2RL3Q96RI0 385 aa17.26■□□□□ 0.35
VARS2-206ENST00000473916 ZNF184Q99676 751 aaPredicted RBP17.26■□□□□ 0.35
VARS2-206ENST00000473916 AIF1LQ9BQI0 150 aa17.26■□□□□ 0.35
VARS2-206ENST00000473916 CPPED1Q9BRF8 314 aaPredicted RBP17.26■□□□□ 0.35
VARS2-206ENST00000473916 SYNPO2LQ9H987 977 aa17.26■□□□□ 0.35
VARS2-206ENST00000473916 SLC6A20Q9NP91 592 aa17.26■□□□□ 0.35
VARS2-206ENST00000473916 TCRBV5S2A0A599 114 aa17.26■□□□□ 0.35
VARS2-206ENST00000473916 CHURC1-FNTBB4DL54 471 aa17.26■□□□□ 0.35
VARS2-206ENST00000473916 TIPRLO75663 272 aa17.26■□□□□ 0.35
VARS2-206ENST00000473916 HTR1EP28566 365 aa17.26■□□□□ 0.35
VARS2-206ENST00000473916 SLC7A1P30825 629 aa17.26■□□□□ 0.35
VARS2-206ENST00000473916 AQP4P55087 323 aa17.26■□□□□ 0.35
VARS2-206ENST00000473916 PRDX1Q06830 199 aaKnown RBP17.26■□□□□ 0.35
VARS2-206ENST00000473916 OGFRL1Q5TC84 451 aaPredicted RBP17.26■□□□□ 0.35
VARS2-206ENST00000473916 HMBOX1Q6NT76 420 aa17.26■□□□□ 0.35
VARS2-206ENST00000473916 TLDC1Q6P9B6 456 aa17.26■□□□□ 0.35
VARS2-206ENST00000473916 ABRAXAS1Q6UWZ7 409 aa17.26■□□□□ 0.35
VARS2-206ENST00000473916 PRR23BQ6ZRT6 265 aa17.26■□□□□ 0.35
VARS2-206ENST00000473916 ZNF551Q7Z340 670 aaPredicted RBP17.26■□□□□ 0.35
VARS2-206ENST00000473916 METTL4Q8N3J2 472 aa17.26■□□□□ 0.35
VARS2-206ENST00000473916 RAB42Q8N4Z0 105 aa17.26■□□□□ 0.35
VARS2-206ENST00000473916 OR4E2Q8NGC2 313 aa17.26■□□□□ 0.35
VARS2-206ENST00000473916 PATE1Q8WXA2 126 aa17.26■□□□□ 0.35
VARS2-206ENST00000473916 METTL2AQ96IZ6 378 aaKnown RBP17.26■□□□□ 0.35
VARS2-206ENST00000473916 ECSITQ9BQ95 431 aa17.26■□□□□ 0.35
VARS2-206ENST00000473916 PCBD2Q9H0N5 130 aa17.26■□□□□ 0.35
VARS2-206ENST00000473916 LTB4R2Q9NPC1 389 aa17.26■□□□□ 0.35
VARS2-206ENST00000473916 AURKCQ9UQB9 309 aa17.26■□□□□ 0.35
VARS2-206ENST00000473916 A6NCN8 305 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 FAM170BA6NMN3 283 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 PRAMEF26H0Y7S4 382 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 PLPP1O14494 284 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 RFXANKO14593 260 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 OR1F1O43749 312 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 PRICKLE3O43900 615 aaPredicted RBP17.25■□□□□ 0.35
VARS2-206ENST00000473916 ATP6V1C1P21283 382 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 CD6P30203 668 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 ZNF763Q0D2J5 394 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 FXNQ16595 210 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 PRSS53Q2L4Q9 553 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 GRAMD1BQ3KR37 738 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 ADGRG5Q8IZF4 528 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.25■□□□□ 0.35
VARS2-206ENST00000473916 NELL1Q92832 810 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 UBE2E3Q969T4 207 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 MACROD1Q9BQ69 325 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 ORAI3Q9BRQ5 295 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 ZNF717Q9BY31 904 aaPredicted RBP17.25■□□□□ 0.35
VARS2-206ENST00000473916 RHBGQ9H310 441 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 RMND5AQ9H871 391 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 HS3ST3A1Q9Y663 406 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 ANKDD1BA6NHY2 528 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 TNFRSF10CO14798 259 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 PPM1DO15297 605 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 PRMT3O60678 531 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 STAMBPO95630 424 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 SLC19A1P41440 591 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 C21orf58P58505 322 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 YPEL5P62699 121 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 SPATS1Q496A3 300 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 AMIGO2Q86SJ2 522 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 SLC9B2Q86UD5 537 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 ABCA7Q8IZY2 2146 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 CLEC4FQ8N1N0 589 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 C16orf78Q8WTQ4 265 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 DUS3LQ96G46 650 aaKnown RBP17.25■□□□□ 0.35
VARS2-206ENST00000473916 DUSP26Q9BV47 211 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 MS4A8Q9BY19 250 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 KLHL4Q9C0H6 718 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.25■□□□□ 0.35
VARS2-206ENST00000473916 TSC22D4Q9Y3Q8 395 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 PCDHB3Q9Y5E6 796 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 PCDHB11Q9Y5F2 797 aa17.25■□□□□ 0.35
VARS2-206ENST00000473916 IGHV1OR15-9A0A0B4J2B8 117 aa17.24■□□□□ 0.35
VARS2-206ENST00000473916 DHRS12A0PJE2 317 aa17.24■□□□□ 0.35
VARS2-206ENST00000473916 AQP12BA6NM10 295 aa17.24■□□□□ 0.35
VARS2-206ENST00000473916 EIF4E1BA6NMX2 242 aaKnown RBP17.24■□□□□ 0.35
VARS2-206ENST00000473916 TPST1O60507 370 aa17.24■□□□□ 0.35
VARS2-206ENST00000473916 ERN1O75460 977 aaKnown RBP17.24■□□□□ 0.35
VARS2-206ENST00000473916 CPSF4O95639 269 aaKnown RBP17.24■□□□□ 0.35
VARS2-206ENST00000473916 PTX3P26022 381 aaPredicted RBP17.24■□□□□ 0.35
VARS2-206ENST00000473916 CCR5P51681 352 aa17.24■□□□□ 0.35
VARS2-206ENST00000473916 TAS2R50P59544 299 aa17.24■□□□□ 0.35
VARS2-206ENST00000473916 PHEXP78562 749 aa17.24■□□□□ 0.35
VARS2-206ENST00000473916 SRSF11Q05519 484 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms