RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 FAM129AQ9BZQ8 928 aa10.95□□□□□ -0.66
CPNE1-222ENST00000473373 PHACTR1Q9C0D0 580 aa10.95□□□□□ -0.66
CPNE1-222ENST00000473373 ILKAPQ9H0C8 392 aaPredicted RBP10.95□□□□□ -0.66
CPNE1-222ENST00000473373 EPS8L2Q9H6S3 715 aa10.95□□□□□ -0.66
CPNE1-222ENST00000473373 CNOT10Q9H9A5 744 aaKnown RBP10.95□□□□□ -0.66
CPNE1-222ENST00000473373 HCN3Q9P1Z3 774 aa10.95□□□□□ -0.66
CPNE1-222ENST00000473373 MKL2Q9ULH7 1088 aa10.95□□□□□ -0.66
CPNE1-222ENST00000473373 SLC22A14Q9Y267 594 aa10.95□□□□□ -0.66
CPNE1-222ENST00000473373 PCSK5Q92824 1860 aa10.95□□□□□ -0.66
CPNE1-222ENST00000473373 FLNCQ14315 2725 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 PTPN13Q12923 2485 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 FAM159BA6NKW6 160 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 IDSB3KWA1 339 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 SUPT3HB4E1H0 165 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 SGK494L7N484 410 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 VPS4BO75351 444 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 SUPT3HO75486 399 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 PDGFAP04085 211 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 HNF4AP41235 474 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 GCGRP47871 477 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 GPX6P59796 221 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 RAB10P61026 200 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 ATP6V0D1P61421 351 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 NAB1Q13506 487 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 TRADDQ15628 312 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 CATSPEREQ5SY80 951 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 AGAP7PQ5VUJ5 663 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 ABHD13Q7L211 337 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 TCAIMQ8N3R3 496 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 MFSD9Q8NBP5 474 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 ANKRD49Q8WVL7 239 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 ANKRD7Q92527 254 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 NEIL2Q969S2 332 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 NACC2Q96BF6 587 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 C8orf44Q96CB5 159 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 CNDP1Q96KN2 507 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 MAGEB10Q96LZ2 347 aaPredicted RBP10.94□□□□□ -0.66
CPNE1-222ENST00000473373 AGAP4Q96P64 663 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 GPR22Q99680 433 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 DERL2Q9GZP9 239 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 TSPYL1Q9H0U9 437 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 ZNF160Q9HCG1 818 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 LRRC4CQ9HCJ2 640 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 C5AR2Q9P296 337 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 C19orf25Q9UFG5 118 aaPredicted RBP10.94□□□□□ -0.66
CPNE1-222ENST00000473373 VPS4AQ9UN37 437 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 HS3ST3B1Q9Y662 390 aa10.94□□□□□ -0.66
CPNE1-222ENST00000473373 KCNE1BA0A087WTH5 132 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 TRBC2A0A5B9 178 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 ZNF860A6NHJ4 632 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 H0YIG0 161 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 SOCS6O14544 535 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 LCMT2O60294 686 aaKnown RBP10.93□□□□□ -0.66
CPNE1-222ENST00000473373 CCNT2O60583 730 aaKnown RBP10.93□□□□□ -0.66
CPNE1-222ENST00000473373 RDH16O75452 317 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 FAM155BO75949 473 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 NSA2O95478 260 aaKnown RBP10.93□□□□□ -0.66
CPNE1-222ENST00000473373 HPP00738 406 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 GNAZP19086 355 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 SLC26A3P40879 764 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 XCR1P46094 333 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 CDKL1Q00532 357 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 EFTUD2Q15029 972 aaKnown RBP eCLIP10.93□□□□□ -0.666e-8■■■■□ 20.9
CPNE1-222ENST00000473373 HERC3Q15034 1050 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 TGFBIQ15582 683 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 KIRREL2Q6UWL6 708 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 ZDHHC24Q6UX98 284 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 TAOK1Q7L7X3 1001 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 KRT78Q8N1N4 520 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 CEP112Q8N8E3 955 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 KCT2Q8NC54 265 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 OR51Q1Q8NH59 317 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 CPT1CQ8TCG5 803 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 FAR2Q96K12 515 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 FMO2Q99518 471 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 SMAD5Q99717 465 aaKnown RBP10.93□□□□□ -0.66
CPNE1-222ENST00000473373 CAPS2Q9BXY5 557 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 RBCK1Q9BYM8 510 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 SLC29A3Q9BZD2 475 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 LHPPQ9H008 270 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 PELI2Q9HAT8 420 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 NMRAL1Q9HBL8 299 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 RIC8BQ9NVN3 520 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 IKZF3Q9UKT9 509 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 MRPS2Q9Y399 296 aaKnown RBP10.93□□□□□ -0.66
CPNE1-222ENST00000473373 NAALAD2Q9Y3Q0 740 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 ANGPTL3Q9Y5C1 460 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 CNTRLQ7Z7A1 2325 aa10.93□□□□□ -0.66
CPNE1-222ENST00000473373 CPAMD8Q8IZJ3 1885 aa10.92□□□□□ -0.66
CPNE1-222ENST00000473373 ANKDD1BA6NHY2 528 aa10.92□□□□□ -0.66
CPNE1-222ENST00000473373 VSTM2BA6NLU5 285 aa10.92□□□□□ -0.66
CPNE1-222ENST00000473373 PSMD12O00232 456 aaPredicted RBP10.92□□□□□ -0.66
CPNE1-222ENST00000473373 FOXS1O43638 330 aa10.92□□□□□ -0.66
CPNE1-222ENST00000473373 CDC123O75794 336 aaPredicted RBP10.92□□□□□ -0.66
CPNE1-222ENST00000473373 CEACAM4O75871 244 aa10.92□□□□□ -0.66
CPNE1-222ENST00000473373 WFS1O76024 890 aa10.92□□□□□ -0.66
CPNE1-222ENST00000473373 KLHL18O94889 574 aa10.92□□□□□ -0.66
CPNE1-222ENST00000473373 ACSL3O95573 720 aa10.92□□□□□ -0.66
CPNE1-222ENST00000473373 ONECUT2O95948 504 aa10.92□□□□□ -0.66
CPNE1-222ENST00000473373 INHBAP08476 426 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms