RNA–Protein interactions for RNA: ENST00000473311.5

ABCF3-210, Transcript of ATP binding cassette subfamily F member 3, human

TSL 5

Gene ABCF3, Length 2,844 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-210	ENST00000473311	NSG1	P42857	185 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	FPGS	Q05932	587 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	MAD2L1BP	Q15013	274 aa	Predicted RBP	13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	ATAD3C	Q5T2N8	411 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	TPGS1	Q6ZTW0	290 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	AHSA2	Q719I0	299 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	RNF180	Q86T96	592 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	SERPINA11	Q86U17	422 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	APCDD1	Q8J025	514 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	DBF4B	Q8NFT6	615 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	UBE2F	Q969M7	185 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	TBC1D20	Q96BZ9	403 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	KCNN2	Q9H2S1	579 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	TRIM39	Q9HCM9	518 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	NMRK2	Q9NPI5	230 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	ACOT13	Q9NPJ3	140 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	PNMA8B	Q9ULN7	279 aa	Predicted RBP	13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	POLH	Q9Y253	713 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	OR51B4	Q9Y5P0	310 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	UPK3BL1	B0FP48	263 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	UPK3BL2	E5RIL1	263 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	EPN2	O95208	641 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	SEC24A	O95486	1093 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	CPSF4	O95639	269 aa	Known RBP	13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	YES1	P07947	543 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	HOXA9	P31269	272 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	KDELR2	P33947	212 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	PRIM2	P49643	509 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	PTCHD3	Q3KNS1	767 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	SYT12	Q8IV01	421 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	PLD3	Q8IV08	490 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	FBXL6	Q8N531	539 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	DCAF4L2	Q8NA75	395 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	HJURP	Q8NCD3	748 aa	Predicted RBP	13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	GPR26	Q8NDV2	337 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	PSMA8	Q8TAA3	256 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	HSH2D	Q96JZ2	352 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	DPH2	Q9BQC3	489 aa	Predicted RBP	13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	REEP1	Q9H902	201 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	LIN7B	Q9HAP6	207 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	CCNB1IP1	Q9NPC3	277 aa		13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	NDRG4	Q9ULP0	352 aa	Known RBP	13.53	□□□□□ -0.24
ABCF3-210	ENST00000473311	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	13.52	□□□□□ -0.24
ABCF3-210	ENST00000473311	KRT87P	A6NCN2	255 aa		13.52	□□□□□ -0.24
ABCF3-210	ENST00000473311	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	13.52	□□□□□ -0.24
ABCF3-210	ENST00000473311	TRAPPC2	P0DI81	140 aa		13.52	□□□□□ -0.24
ABCF3-210	ENST00000473311	TRAPPC2B	P0DI82	140 aa		13.52	□□□□□ -0.24
ABCF3-210	ENST00000473311	COL6A1	P12109	1028 aa		13.52	□□□□□ -0.24
ABCF3-210	ENST00000473311	HIST1H2AD	P20671	130 aa		13.52	□□□□□ -0.24
ABCF3-210	ENST00000473311	CCR7	P32248	378 aa		13.52	□□□□□ -0.24
ABCF3-210	ENST00000473311	KRT20	P35900	424 aa		13.52	□□□□□ -0.24
ABCF3-210	ENST00000473311	TGFBR1	P36897	503 aa		13.52	□□□□□ -0.24
ABCF3-210	ENST00000473311	SLC13A2	Q13183	592 aa		13.52	□□□□□ -0.24
ABCF3-210	ENST00000473311	ZXDC	Q2QGD7	858 aa	Predicted RBP	13.52	□□□□□ -0.24
ABCF3-210	ENST00000473311	ESCO2	Q56NI9	601 aa		13.52	□□□□□ -0.24
ABCF3-210	ENST00000473311	KIAA1614	Q5VZ46	1190 aa		13.52	□□□□□ -0.24
ABCF3-210	ENST00000473311	NOXRED1	Q6NXP6	359 aa		13.52	□□□□□ -0.24
ABCF3-210	ENST00000473311	LRRC70	Q7Z2Q7	622 aa		13.52	□□□□□ -0.24
ABCF3-210	ENST00000473311	TSPYL5	Q86VY4	417 aa	Predicted RBP	13.52	□□□□□ -0.24
ABCF3-210	ENST00000473311	TCAIM	Q8N3R3	496 aa		13.52	□□□□□ -0.24
ABCF3-210	ENST00000473311	LINC00469	Q8N7U9	141 aa		13.52	□□□□□ -0.24
ABCF3-210	ENST00000473311	OR5H6	Q8NGV6	325 aa		13.52	□□□□□ -0.24
ABCF3-210	ENST00000473311	LGALS12	Q96DT0	336 aa		13.52	□□□□□ -0.24
ABCF3-210	ENST00000473311	ASIC4	Q96FT7	647 aa		13.52	□□□□□ -0.24
ABCF3-210	ENST00000473311	ZFYVE19	Q96K21	471 aa		13.52	□□□□□ -0.24
ABCF3-210	ENST00000473311	HIST1H2AH	Q96KK5	128 aa		13.52	□□□□□ -0.24
ABCF3-210	ENST00000473311	HIST1H2AJ	Q99878	128 aa		13.52	□□□□□ -0.24
ABCF3-210	ENST00000473311	H2AFJ	Q9BTM1	129 aa		13.52	□□□□□ -0.24
ABCF3-210	ENST00000473311	POLE4	Q9NR33	117 aa		13.52	□□□□□ -0.24
ABCF3-210	ENST00000473311	TOR4A	Q9NXH8	423 aa		13.52	□□□□□ -0.24
ABCF3-210	ENST00000473311	RWDD3	Q9Y3V2	267 aa		13.52	□□□□□ -0.24
ABCF3-210	ENST00000473311	KCNK5	O95279	499 aa		13.52	□□□□□ -0.25
ABCF3-210	ENST00000473311	LCK	P06239	509 aa		13.52	□□□□□ -0.25
ABCF3-210	ENST00000473311	CBSL	P0DN79	551 aa		13.52	□□□□□ -0.25
ABCF3-210	ENST00000473311	CD36	P16671	472 aa		13.52	□□□□□ -0.25
ABCF3-210	ENST00000473311	AMD1	P17707	334 aa		13.52	□□□□□ -0.25
ABCF3-210	ENST00000473311	ITPKA	P23677	461 aa		13.52	□□□□□ -0.25
ABCF3-210	ENST00000473311	CBS	P35520	551 aa		13.52	□□□□□ -0.25
ABCF3-210	ENST00000473311	MVK	Q03426	396 aa		13.52	□□□□□ -0.25
ABCF3-210	ENST00000473311	CDKN3	Q16667	212 aa		13.52	□□□□□ -0.25
ABCF3-210	ENST00000473311	DUOXA1	Q1HG43	343 aa		13.52	□□□□□ -0.25
ABCF3-210	ENST00000473311	SLC8B1	Q6J4K2	584 aa		13.52	□□□□□ -0.25
ABCF3-210	ENST00000473311	RETSAT	Q6NUM9	610 aa		13.52	□□□□□ -0.25
ABCF3-210	ENST00000473311	PAGE2	Q7Z2X7	111 aa		13.52	□□□□□ -0.25
ABCF3-210	ENST00000473311	ZZZ3	Q8IYH5	903 aa		13.52	□□□□□ -0.25
ABCF3-210	ENST00000473311	ANKRD53	Q8N9V6	530 aa		13.52	□□□□□ -0.25
ABCF3-210	ENST00000473311	PROX1	Q92786	737 aa		13.52	□□□□□ -0.25
ABCF3-210	ENST00000473311	ALG14	Q96F25	216 aa		13.52	□□□□□ -0.25
ABCF3-210	ENST00000473311	TPD52L3	Q96J77	140 aa		13.52	□□□□□ -0.25
ABCF3-210	ENST00000473311	RIPOR3	Q96MK2	946 aa		13.52	□□□□□ -0.25
ABCF3-210	ENST00000473311	COPS8	Q99627	209 aa		13.52	□□□□□ -0.25
ABCF3-210	ENST00000473311	RRAGC	Q9HB90	399 aa		13.52	□□□□□ -0.25
ABCF3-210	ENST00000473311	SLC22A14	Q9Y267	594 aa		13.52	□□□□□ -0.25
ABCF3-210	ENST00000473311	KCNE1B	A0A087WTH5	132 aa		13.51	□□□□□ -0.25
ABCF3-210	ENST00000473311	MAGEB17	A8MXT2	336 aa		13.51	□□□□□ -0.25
ABCF3-210	ENST00000473311	ERVH48-1	M5A8F1	160 aa		13.51	□□□□□ -0.25
ABCF3-210	ENST00000473311	BNIP3L	O60238	219 aa		13.51	□□□□□ -0.25
ABCF3-210	ENST00000473311	KCNJ13	O60928	360 aa		13.51	□□□□□ -0.25
ABCF3-210	ENST00000473311	EFNA1	P20827	205 aa	Predicted RBP	13.51	□□□□□ -0.25
ABCF3-210	ENST00000473311	CARTPT	Q16568	116 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms