RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 DZIP1Q86YF9 867 aaKnown RBP4.76□□□□□ -1.65
CLK1-209ENST00000472679 SIX6OS1Q8N1H7 587 aa4.76□□□□□ -1.65
CLK1-209ENST00000472679 NCOA7Q8NI08 942 aa4.76□□□□□ -1.65
CLK1-209ENST00000472679 SLC26A7Q8TE54 656 aa4.76□□□□□ -1.65
CLK1-209ENST00000472679 FAM162AQ96A26 154 aa4.76□□□□□ -1.65
CLK1-209ENST00000472679 SPATA17Q96L03 361 aa4.76□□□□□ -1.65
CLK1-209ENST00000472679 AK8Q96MA6 479 aa4.76□□□□□ -1.65
CLK1-209ENST00000472679 PKP2Q99959 881 aa4.76□□□□□ -1.65
CLK1-209ENST00000472679 VGLL1Q99990 258 aa4.76□□□□□ -1.65
CLK1-209ENST00000472679 ALKBH7Q9BT30 221 aaPredicted RBP4.76□□□□□ -1.65
CLK1-209ENST00000472679 CABLES2Q9BTV7 478 aa4.76□□□□□ -1.65
CLK1-209ENST00000472679 HOXD1Q9GZZ0 328 aa4.76□□□□□ -1.65
CLK1-209ENST00000472679 MED20Q9H944 212 aa4.76□□□□□ -1.65
CLK1-209ENST00000472679 THEGQ9P2T0 379 aa4.76□□□□□ -1.65
CLK1-209ENST00000472679 DNAJB9Q9UBS3 223 aa4.76□□□□□ -1.65
CLK1-209ENST00000472679 FBXL4Q9UKA2 621 aa4.76□□□□□ -1.65
CLK1-209ENST00000472679 POMT2Q9UKY4 750 aa4.76□□□□□ -1.65
CLK1-209ENST00000472679 SELENOKQ9Y6D0 94 aa4.76□□□□□ -1.65
CLK1-209ENST00000472679 PRSS21Q9Y6M0 314 aa4.76□□□□□ -1.65
CLK1-209ENST00000472679 TRAV18A0A075B6X5 111 aa4.75□□□□□ -1.65
CLK1-209ENST00000472679 A0A0J9YWU9 116 aa4.75□□□□□ -1.65
CLK1-209ENST00000472679 E5RGE8 158 aa4.75□□□□□ -1.65
CLK1-209ENST00000472679 WDR46O15213 610 aaKnown RBP4.75□□□□□ -1.65
CLK1-209ENST00000472679 ST8SIA3O43173 380 aa4.75□□□□□ -1.65
CLK1-209ENST00000472679 DCXO43602 365 aa4.75□□□□□ -1.65
CLK1-209ENST00000472679 ECE2O60344 883 aa4.75□□□□□ -1.65
CLK1-209ENST00000472679 TBX6O95947 436 aaPredicted RBP4.75□□□□□ -1.65
CLK1-209ENST00000472679 AADACP22760 399 aa4.75□□□□□ -1.65
CLK1-209ENST00000472679 KCNJ1P48048 391 aa4.75□□□□□ -1.65
CLK1-209ENST00000472679 HUNKP57058 714 aa4.75□□□□□ -1.65
CLK1-209ENST00000472679 IRX4P78413 519 aa4.75□□□□□ -1.65
CLK1-209ENST00000472679 CALCOCO2Q13137 446 aa4.75□□□□□ -1.65
CLK1-209ENST00000472679 ZNF542PQ5EBM4 170 aa4.75□□□□□ -1.65
CLK1-209ENST00000472679 GPR141Q7Z602 305 aa4.75□□□□□ -1.65
CLK1-209ENST00000472679 LRRTM1Q86UE6 522 aa4.75□□□□□ -1.65
CLK1-209ENST00000472679 CREBRFQ8IUR6 639 aa4.75□□□□□ -1.65
CLK1-209ENST00000472679 NUP37Q8NFH4 326 aa4.75□□□□□ -1.65
CLK1-209ENST00000472679 ERO1AQ96HE7 468 aa4.75□□□□□ -1.65
CLK1-209ENST00000472679 CITED2Q99967 270 aaPredicted RBP4.75□□□□□ -1.65
CLK1-209ENST00000472679 OVOL2Q9BRP0 275 aa4.75□□□□□ -1.65
CLK1-209ENST00000472679 TRIM15Q9C019 465 aa4.75□□□□□ -1.65
CLK1-209ENST00000472679 WWTR1Q9GZV5 400 aa4.75□□□□□ -1.65
CLK1-209ENST00000472679 AGTPBP1Q9UPW5 1226 aa4.75□□□□□ -1.65
CLK1-209ENST00000472679 NSG2Q9Y328 171 aa4.75□□□□□ -1.65
CLK1-209ENST00000472679 NEDD4P46934 1319 aa4.74□□□□□ -1.65
CLK1-209ENST00000472679 A0A087WZ39 114 aa4.74□□□□□ -1.65
CLK1-209ENST00000472679 KIF5CO60282 957 aa4.74□□□□□ -1.65
CLK1-209ENST00000472679 CEACAM4O75871 244 aa4.74□□□□□ -1.65
CLK1-209ENST00000472679 MOCS2O96007 188 aaPredicted RBP4.74□□□□□ -1.65
CLK1-209ENST00000472679 C9P02748 559 aa4.74□□□□□ -1.65
CLK1-209ENST00000472679 EEF2P13639 858 aaKnown RBP4.74□□□□□ -1.65
CLK1-209ENST00000472679 UGT1A4P22310 534 aa4.74□□□□□ -1.65
CLK1-209ENST00000472679 ROR1Q01973 937 aa4.74□□□□□ -1.65
CLK1-209ENST00000472679 SCN1BQ07699 218 aa4.74□□□□□ -1.65
CLK1-209ENST00000472679 BFSP1Q12934 665 aa4.74□□□□□ -1.65
CLK1-209ENST00000472679 NFATC2Q13469 925 aa4.74□□□□□ -1.65
CLK1-209ENST00000472679 SCARB2Q14108 478 aa4.74□□□□□ -1.65
CLK1-209ENST00000472679 FAM189A2Q15884 450 aa4.74□□□□□ -1.65
CLK1-209ENST00000472679 DHRS11Q6UWP2 260 aa4.74□□□□□ -1.65
CLK1-209ENST00000472679 FRRS1Q6ZNA5 592 aa4.74□□□□□ -1.65
CLK1-209ENST00000472679 ZNF440Q8IYI8 595 aa4.74□□□□□ -1.65
CLK1-209ENST00000472679 OR8H3Q8N146 312 aa4.74□□□□□ -1.65
CLK1-209ENST00000472679 PRSS35Q8N3Z0 413 aa4.74□□□□□ -1.65
CLK1-209ENST00000472679 AQP11Q8NBQ7 271 aa4.74□□□□□ -1.65
CLK1-209ENST00000472679 UXS1Q8NBZ7 420 aa4.74□□□□□ -1.65
CLK1-209ENST00000472679 OR5T2Q8NGG2 359 aa4.74□□□□□ -1.65
CLK1-209ENST00000472679 GOT1L1Q8NHS2 421 aaPredicted RBP4.74□□□□□ -1.65
CLK1-209ENST00000472679 DNASE1L2Q92874 299 aa4.74□□□□□ -1.65
CLK1-209ENST00000472679 SGF29Q96ES7 293 aa4.74□□□□□ -1.65
CLK1-209ENST00000472679 AGAP3Q96P47 875 aa4.74□□□□□ -1.65
CLK1-209ENST00000472679 C5orf66Q9H5L9 145 aa4.74□□□□□ -1.65
CLK1-209ENST00000472679 C10orf88Q9H8K7 445 aa4.74□□□□□ -1.65
CLK1-209ENST00000472679 MRGBPQ9NV56 204 aa4.74□□□□□ -1.65
CLK1-209ENST00000472679 HBS1LQ9Y450 684 aaKnown RBP4.74□□□□□ -1.65
CLK1-209ENST00000472679 COLEC10Q9Y6Z7 277 aa4.74□□□□□ -1.65
CLK1-209ENST00000472679 CYSRT1A8MQ03 144 aa4.73□□□□□ -1.65
CLK1-209ENST00000472679 A8MVM7 634 aa4.73□□□□□ -1.65
CLK1-209ENST00000472679 KPNA7A9QM74 516 aa4.73□□□□□ -1.65
CLK1-209ENST00000472679 G3V2L1 256 aa4.73□□□□□ -1.65
CLK1-209ENST00000472679 SLC1A7O00341 560 aa4.73□□□□□ -1.65
CLK1-209ENST00000472679 SOCS3O14543 225 aa4.73□□□□□ -1.65
CLK1-209ENST00000472679 MAGEB2O15479 319 aa4.73□□□□□ -1.65
CLK1-209ENST00000472679 TLX2O43763 284 aaPredicted RBP4.73□□□□□ -1.65
CLK1-209ENST00000472679 RLN1P04808 185 aa4.73□□□□□ -1.65
CLK1-209ENST00000472679 SP9P0CG40 484 aa4.73□□□□□ -1.65
CLK1-209ENST00000472679 OR3A1P47881 315 aa4.73□□□□□ -1.65
CLK1-209ENST00000472679 KRTAP10-7P60409 375 aaPredicted RBP4.73□□□□□ -1.65
CLK1-209ENST00000472679 FOLH1Q04609 750 aa4.73□□□□□ -1.65
CLK1-209ENST00000472679 PTK6Q13882 451 aa4.73□□□□□ -1.65
CLK1-209ENST00000472679 MOGAT2Q3SYC2 334 aa4.73□□□□□ -1.65
CLK1-209ENST00000472679 SPOUT1Q5T280 376 aaKnown RBP4.73□□□□□ -1.65
CLK1-209ENST00000472679 ZNF772Q68DY9 489 aaPredicted RBP4.73□□□□□ -1.65
CLK1-209ENST00000472679 ZNF770Q6IQ21 691 aaPredicted RBP4.73□□□□□ -1.65
CLK1-209ENST00000472679 FAAP20Q6NZ36 180 aa4.73□□□□□ -1.65
CLK1-209ENST00000472679 FBXL22Q6P050 247 aa4.73□□□□□ -1.65
CLK1-209ENST00000472679 TRIM65Q6PJ69 517 aa4.73□□□□□ -1.65
CLK1-209ENST00000472679 DOK6Q6PKX4 331 aa4.73□□□□□ -1.65
CLK1-209ENST00000472679 CHMP1BQ7LBR1 199 aa4.73□□□□□ -1.65
CLK1-209ENST00000472679 MEX3DQ86XN8 651 aaKnown RBP4.73□□□□□ -1.65
CLK1-209ENST00000472679 ZC3H3Q8IXZ2 948 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms