RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 FLNCQ14315 2725 aa9.25□□□□□ -0.93
SRRT-208ENST00000469602 TNRC6AQ8NDV7 1962 aaKnown RBP9.24□□□□□ -0.93
SRRT-208ENST00000469602 IGLV3-12A0A075B6K2 115 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 SYCE1LA8MT33 242 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 SUPT3HB4E1H0 165 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 H0YIG0 161 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 MKRN2OSH3BPM6 223 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 UBXN8O00124 270 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 PEX12O00623 359 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 NDUFS4O43181 175 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 SUPT3HO75486 399 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 STK16O75716 305 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 DNAJB5O75953 348 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 KLHL2O95198 593 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 C1GALT1C1LP0DN25 315 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 TNFRSF8P28908 595 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 AHRP35869 848 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 MAGEA12P43365 314 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 SCTRP47872 440 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 AVPR1BP47901 424 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 GLRBP48167 497 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 HSPA7P48741 367 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 RRADP55042 308 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 SNRPNP63162 240 aaKnown RBP9.24□□□□□ -0.93
SRRT-208ENST00000469602 KLC1Q07866 573 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 C19orf57Q0VDD7 668 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 CDC16Q13042 620 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 CHAF1BQ13112 559 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 PWP1Q13610 501 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 ATP1A4Q13733 1029 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 ACAP2Q15057 778 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 PDK4Q16654 411 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 FBXO48Q5FWF7 155 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 ATG9BQ674R7 924 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 KLC3Q6P597 504 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 SLCO4C1Q6ZQN7 724 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 SHISA6Q6ZSJ9 500 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 MED25Q71SY5 747 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 GSPT2Q8IYD1 628 aaKnown RBP9.24□□□□□ -0.93
SRRT-208ENST00000469602 AMER3Q8N944 861 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 TMEM102Q8N9M5 508 aaPredicted RBP9.24□□□□□ -0.93
SRRT-208ENST00000469602 KCT2Q8NC54 265 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 OR9A4Q8NGU2 314 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 C9orf43Q8TAL5 461 aaPredicted RBP9.24□□□□□ -0.93
SRRT-208ENST00000469602 NT5CQ8TCD5 201 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 STT3BQ8TCJ2 826 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 MOCOSQ96EN8 888 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 ABHD17AQ96GS6 310 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 GPR78Q96P69 363 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 CAPS2Q9BXY5 557 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 TRIM55Q9BYV6 548 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 SLC25A18Q9H1K4 315 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 VPS11Q9H270 941 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 SPNS1Q9H2V7 528 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 EHD1Q9H4M9 534 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 SOX17Q9H6I2 414 aaPredicted RBP9.24□□□□□ -0.93
SRRT-208ENST00000469602 ACSS2Q9NR19 701 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 DNAJC11Q9NVH1 559 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 TRPC4Q9UBN4 977 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 ZFP69BQ9UJL9 534 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 MAP4K5Q9Y4K4 846 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 RP1L1Q8IWN7 2480 aaPredicted RBP9.24□□□□□ -0.93
SRRT-208ENST00000469602 SCN2AQ99250 2005 aa9.24□□□□□ -0.93
SRRT-208ENST00000469602 CNTRLQ7Z7A1 2325 aa9.23□□□□□ -0.93
SRRT-208ENST00000469602 NBASA2RRP1 2371 aa9.23□□□□□ -0.93
SRRT-208ENST00000469602 TRIM49D1C9J1S8 452 aa9.23□□□□□ -0.93
SRRT-208ENST00000469602 AGPSO00116 658 aa9.23□□□□□ -0.93
SRRT-208ENST00000469602 FFAR3O14843 346 aa9.23□□□□□ -0.93
SRRT-208ENST00000469602 CLGNO14967 610 aa9.23□□□□□ -0.93
SRRT-208ENST00000469602 GPR42O15529 346 aa9.23□□□□□ -0.93
SRRT-208ENST00000469602 CCNT2O60583 730 aaKnown RBP9.23□□□□□ -0.93
SRRT-208ENST00000469602 H2AFYO75367 372 aaKnown RBP9.23□□□□□ -0.93
SRRT-208ENST00000469602 NSA2O95478 260 aaKnown RBP9.23□□□□□ -0.93
SRRT-208ENST00000469602 IGHEP01854 428 aa9.23□□□□□ -0.93
SRRT-208ENST00000469602 SNRPAP09012 282 aaKnown RBP9.23□□□□□ -0.93
SRRT-208ENST00000469602 ZGLP1P0C6A0 271 aa9.23□□□□□ -0.93
SRRT-208ENST00000469602 MYBL2P10244 700 aa9.23□□□□□ -0.93
SRRT-208ENST00000469602 MTHFD2P13995 350 aa9.23□□□□□ -0.93
SRRT-208ENST00000469602 IL1RNP18510 177 aa9.23□□□□□ -0.93
SRRT-208ENST00000469602 MMP11P24347 488 aa9.23□□□□□ -0.93
SRRT-208ENST00000469602 CXCR2P25025 360 aa9.23□□□□□ -0.93
SRRT-208ENST00000469602 VARSP26640 1264 aaKnown RBP9.23□□□□□ -0.93
SRRT-208ENST00000469602 GCAP28676 217 aa9.23□□□□□ -0.93
SRRT-208ENST00000469602 NFATC3Q12968 1075 aa9.23□□□□□ -0.93
SRRT-208ENST00000469602 SLC29A2Q14542 456 aa9.23□□□□□ -0.93
SRRT-208ENST00000469602 RBBP5Q15291 538 aaKnown RBP9.23□□□□□ -0.93
SRRT-208ENST00000469602 VWA2Q5GFL6 755 aa9.23□□□□□ -0.93
SRRT-208ENST00000469602 LGSNQ5TDP6 509 aa9.23□□□□□ -0.93
SRRT-208ENST00000469602 PRSS41Q7RTY9 318 aa9.23□□□□□ -0.93
SRRT-208ENST00000469602 LRRC70Q7Z2Q7 622 aa9.23□□□□□ -0.93
SRRT-208ENST00000469602 PRSS58Q8IYP2 241 aa9.23□□□□□ -0.93
SRRT-208ENST00000469602 AFAP1L2Q8N4X5 818 aa9.23□□□□□ -0.93
SRRT-208ENST00000469602 SNX31Q8N9S9 440 aa9.23□□□□□ -0.93
SRRT-208ENST00000469602 ANKRD53Q8N9V6 530 aa9.23□□□□□ -0.93
SRRT-208ENST00000469602 TRPV3Q8NET8 790 aa9.23□□□□□ -0.93
SRRT-208ENST00000469602 ZCCHC10Q8TBK6 192 aa9.23□□□□□ -0.93
SRRT-208ENST00000469602 UBTD2Q8WUN7 234 aa9.23□□□□□ -0.93
SRRT-208ENST00000469602 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.23□□□□□ -0.93
SRRT-208ENST00000469602 ESAMQ96AP7 390 aa9.23□□□□□ -0.93
SRRT-208ENST00000469602 MIEF2Q96C03 454 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms