RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 TM4SF19Q96DZ7 209 aa8.16□□□□□ -1.1
SSBP1-208ENST00000469123 WBP1Q96G27 269 aa8.16□□□□□ -1.1
SSBP1-208ENST00000469123 C1QTNF3Q9BXJ4 246 aa8.16□□□□□ -1.1
SSBP1-208ENST00000469123 UNKQ9C0B0 810 aaKnown RBP8.16□□□□□ -1.1
SSBP1-208ENST00000469123 IQCGQ9H095 443 aaKnown RBP8.16□□□□□ -1.1
SSBP1-208ENST00000469123 STMN4Q9H169 189 aaPredicted RBP8.16□□□□□ -1.1
SSBP1-208ENST00000469123 CHST8Q9H2A9 424 aa8.16□□□□□ -1.1
SSBP1-208ENST00000469123 PRORYQ9H606 182 aa8.16□□□□□ -1.1
SSBP1-208ENST00000469123 IFT80Q9P2H3 777 aaPredicted RBP8.16□□□□□ -1.1
SSBP1-208ENST00000469123 CPSF2Q9P2I0 782 aaKnown RBP8.16□□□□□ -1.1
SSBP1-208ENST00000469123 TBK1Q9UHD2 729 aa8.16□□□□□ -1.1
SSBP1-208ENST00000469123 GRID1Q9ULK0 1009 aa8.16□□□□□ -1.1
SSBP1-208ENST00000469123 RUVBL1Q9Y265 456 aaKnown RBP8.16□□□□□ -1.1
SSBP1-208ENST00000469123 FARSAQ9Y285 508 aaKnown RBP8.16□□□□□ -1.1
SSBP1-208ENST00000469123 TSC22D4Q9Y3Q8 395 aa8.16□□□□□ -1.1
SSBP1-208ENST00000469123 SPTA1P02549 2419 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 SYNDIG1LA6NDD5 238 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 TK2O00142 265 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 HCRTR1O43613 425 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 OR1F1O43749 312 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 CLEC3AO75596 197 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 CREG1O75629 220 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 NSA2O95478 260 aaKnown RBP8.15□□□□□ -1.1
SSBP1-208ENST00000469123 PYGBP11216 843 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 ATP5F1P24539 256 aaPredicted RBP8.15□□□□□ -1.1
SSBP1-208ENST00000469123 ITPKBP27987 946 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 CRHR1P34998 444 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 GDF5P43026 501 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 SLCO1A2P46721 670 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 ARFIP1P53367 373 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 CXADRP78310 365 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 OCA2Q04671 838 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 SLC18A2Q05940 514 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 ASPHQ12797 758 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 CDC20Q12834 499 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 GTF2H2Q13888 395 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 DSG2Q14126 1118 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 SLBPQ14493 270 aaKnown RBP eCLIP8.15□□□□□ -1.1
SSBP1-208ENST00000469123 SSPNQ14714 243 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 UGT8Q16880 541 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 XKR6Q5GH73 641 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 CATSPEREQ5SY80 951 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 GRHL2Q6ISB3 625 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 TMEM214Q6NUQ4 689 aaKnown RBP8.15□□□□□ -1.1
SSBP1-208ENST00000469123 GTF2H2CQ6P1K8 395 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 FAM198BQ6UWH4 519 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 LRIG3Q6UXM1 1119 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 OVCH1Q7RTY7 1134 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 VN1R4Q7Z5H5 301 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 VASH2Q86V25 355 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 RAB43Q86YS6 212 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 PLD6Q8N2A8 252 aaKnown RBP8.15□□□□□ -1.1
SSBP1-208ENST00000469123 ARHGEF39Q8N4T4 335 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 SLC38A9Q8NBW4 561 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 LSM14AQ8ND56 463 aaKnown RBP8.15□□□□□ -1.1
SSBP1-208ENST00000469123 C7orf57Q8NEG2 295 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 OR2Y1Q8NGV0 311 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 EPS8L3Q8TE67 593 aaKnown RBP8.15□□□□□ -1.1
SSBP1-208ENST00000469123 SREK1Q8WXA9 508 aaKnown RBP8.15□□□□□ -1.1
SSBP1-208ENST00000469123 CENPKQ9BS16 269 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 ROGDIQ9GZN7 287 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 ACTL8Q9H568 366 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 ANKHQ9HCJ1 492 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 ZNF304Q9HCX3 659 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 MKKSQ9NPJ1 570 aaPredicted RBP8.15□□□□□ -1.1
SSBP1-208ENST00000469123 WDR70Q9NW82 654 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 ARGLU1Q9NWB6 273 aaPredicted RBP8.15□□□□□ -1.1
SSBP1-208ENST00000469123 DHCR7Q9UBM7 475 aaKnown RBP8.15□□□□□ -1.1
SSBP1-208ENST00000469123 ZNF282Q9UDV7 671 aaPredicted RBP8.15□□□□□ -1.1
SSBP1-208ENST00000469123 TCFL5Q9UL49 500 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 SH2B3Q9UQQ2 575 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 PLAAQ9Y263 795 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 MAP4K5Q9Y4K4 846 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 PCDHGA11Q9Y5H2 935 aa8.15□□□□□ -1.1
SSBP1-208ENST00000469123 CCDC88CQ9P219 2028 aa8.15□□□□□ -1.11
SSBP1-208ENST00000469123 IGLV3-12A0A075B6K2 115 aa8.14□□□□□ -1.11
SSBP1-208ENST00000469123 TLDC2A0PJX2 215 aa8.14□□□□□ -1.11
SSBP1-208ENST00000469123 FEZF1A0PJY2 475 aa8.14□□□□□ -1.11
SSBP1-208ENST00000469123 ANKDD1BA6NHY2 528 aa8.14□□□□□ -1.11
SSBP1-208ENST00000469123 SMIM23A6NLE4 172 aa8.14□□□□□ -1.11
SSBP1-208ENST00000469123 ERVH48-1M5A8F1 160 aa8.14□□□□□ -1.11
SSBP1-208ENST00000469123 E2F3O00716 465 aa8.14□□□□□ -1.11
SSBP1-208ENST00000469123 COPEO14579 308 aa8.14□□□□□ -1.11
SSBP1-208ENST00000469123 NDUFS4O43181 175 aa8.14□□□□□ -1.11
SSBP1-208ENST00000469123 NRP2O60462 931 aa8.14□□□□□ -1.11
SSBP1-208ENST00000469123 KLHL41O60662 606 aa8.14□□□□□ -1.11
SSBP1-208ENST00000469123 WFS1O76024 890 aa8.14□□□□□ -1.11
SSBP1-208ENST00000469123 MLYCDO95822 493 aa8.14□□□□□ -1.11
SSBP1-208ENST00000469123 OTCP00480 354 aa8.14□□□□□ -1.11
SSBP1-208ENST00000469123 RPS17P08708 135 aaKnown RBP8.14□□□□□ -1.11
SSBP1-208ENST00000469123 MYZAPP0CAP1 466 aa8.14□□□□□ -1.11
SSBP1-208ENST00000469123 MYL2P10916 166 aa8.14□□□□□ -1.11
SSBP1-208ENST00000469123 SFTPCP11686 197 aa8.14□□□□□ -1.11
SSBP1-208ENST00000469123 KRT4P19013 534 aa8.14□□□□□ -1.11
SSBP1-208ENST00000469123 FBLP22087 321 aaKnown RBP8.14□□□□□ -1.11
SSBP1-208ENST00000469123 EEF1DP29692 281 aaKnown RBP8.14□□□□□ -1.11
SSBP1-208ENST00000469123 FOLR3P41439 243 aa8.14□□□□□ -1.11
SSBP1-208ENST00000469123 PIK3CBP42338 1070 aa8.14□□□□□ -1.11
SSBP1-208ENST00000469123 HERVK_113P63132 956 aa8.14□□□□□ -1.11
SSBP1-208ENST00000469123 YBX1P67809 324 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms