RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 GGT1P19440 569 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 FASP25445 335 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 RPL10P27635 214 aaKnown RBP9.78□□□□□ -0.84
MSH5-213ENST00000468136 GRIA3P42263 894 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 POLE2P56282 527 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 PDE7AQ13946 482 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 CLCA4Q14CN2 919 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 HEPACAMQ14CZ8 416 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 RBBP5Q15291 538 aaKnown RBP9.78□□□□□ -0.84
MSH5-213ENST00000468136 TRIP10Q15642 601 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 UGT8Q16880 541 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 PGS1Q32NB8 556 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 GLYATQ6IB77 296 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 SLC36A4Q6YBV0 504 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 Q6ZSR6 202 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 ERMP1Q7Z2K6 904 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 AMIGO1Q86WK6 493 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 SLC30A8Q8IWU4 369 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 PHACTR4Q8IZ21 702 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 KRTCAP2Q8N6L1 136 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 EFCAB3Q8N7B9 438 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 LMNTD1Q8N9Z9 388 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 ICA1LQ8NDH6 482 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 OR52E1Q8NGJ3 308 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 GOT1L1Q8NHS2 421 aaPredicted RBP9.78□□□□□ -0.84
MSH5-213ENST00000468136 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.78□□□□□ -0.84
MSH5-213ENST00000468136 GPBAR1Q8TDU6 330 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 LCN9Q8WX39 176 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 RGMAQ96B86 450 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 ERLEC1Q96DZ1 483 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 TOE1Q96GM8 510 aaKnown RBP9.78□□□□□ -0.84
MSH5-213ENST00000468136 REXO5Q96IC2 774 aaKnown RBP9.78□□□□□ -0.84
MSH5-213ENST00000468136 PPM1MQ96MI6 270 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 IL17FQ96PD4 163 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 NR1H4Q96RI1 486 aaPredicted RBP9.78□□□□□ -0.84
MSH5-213ENST00000468136 SLC39A3Q9BRY0 314 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 MS4A8Q9BY19 250 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 ROGDIQ9GZN7 287 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 REXO4Q9GZR2 422 aaKnown RBP9.78□□□□□ -0.84
MSH5-213ENST00000468136 TWSG1Q9GZX9 223 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 PCDHAC1Q9H158 963 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 MAGIXQ9H6Y5 334 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 KAT8Q9H7Z6 458 aaKnown RBP9.78□□□□□ -0.84
MSH5-213ENST00000468136 LTB4R2Q9NPC1 389 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 FZD3Q9NPG1 666 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 OLAHQ9NV23 265 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 VAPAQ9P0L0 249 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 EBF1Q9UH73 591 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 RIMS3Q9UJD0 308 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 ANAPC2Q9UJX6 822 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 WDR37Q9Y2I8 494 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 BPTFQ12830 3046 aa9.78□□□□□ -0.84
MSH5-213ENST00000468136 SPTY2D1-AS1A0A0U1RR47 76 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 A6NCN8 305 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 C9JVG2 144 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 SCN2BO60939 215 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 IGHV4-34P06331 123 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 DRD2P14416 443 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 FOSL2P15408 326 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 GPX2P18283 190 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 TACR1P25103 407 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 ACTR1BP42025 376 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 RPS9P46781 194 aaKnown RBP9.77□□□□□ -0.85
MSH5-213ENST00000468136 RXRGP48443 463 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 ACTR1AP61163 376 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 RPS15AP62244 130 aaKnown RBP9.77□□□□□ -0.85
MSH5-213ENST00000468136 CSNK1G2P78368 415 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 RAE1P78406 368 aaKnown RBP9.77□□□□□ -0.85
MSH5-213ENST00000468136 TXNL4AP83876 142 aaKnown RBP9.77□□□□□ -0.85
MSH5-213ENST00000468136 VEZF1Q14119 521 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 SIM2Q14190 667 aaPredicted RBP9.77□□□□□ -0.85
MSH5-213ENST00000468136 ELOAQ14241 798 aaKnown RBP9.77□□□□□ -0.85
MSH5-213ENST00000468136 ALG11Q2TAA5 492 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 FAM98BQ52LJ0 330 aaKnown RBP9.77□□□□□ -0.85
MSH5-213ENST00000468136 RABL3Q5HYI8 236 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 FAM71E1Q6IPT2 247 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 IRGCQ6NXR0 463 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 ARMCX6Q7L4S7 300 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 NUDT13Q86X67 352 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 CALHM3Q86XJ0 350 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 PDSS2Q86YH6 399 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 ADHFE1Q8IWW8 467 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 TRIM48Q8IWZ4 208 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 MICU2Q8IYU8 434 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 SPEM1Q8N4L4 309 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 ANKFN1Q8N957 763 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 MFSD2AQ8NA29 543 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 LINC01555Q8NAE3 123 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 OR2A1Q8NGT9 310 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 C16orf78Q8WTQ4 265 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 NRG4Q8WWG1 115 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 PPCDCQ96CD2 204 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 FAM120BQ96EK7 910 aaKnown RBP9.77□□□□□ -0.85
MSH5-213ENST00000468136 KLHDC7BQ96G42 594 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 PDXPQ96GD0 296 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 RNF145Q96MT1 663 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 ZNF583Q96ND8 569 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 PANX1Q96RD7 426 aa9.77□□□□□ -0.85
MSH5-213ENST00000468136 CPPED1Q9BRF8 314 aaPredicted RBP9.77□□□□□ -0.85
MSH5-213ENST00000468136 FAIM2Q9BWQ8 316 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms