RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 PNLIPP16233 465 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 PCSK2P16519 638 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 CALB2P22676 271 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 PRDX6P30041 224 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 MLLT3P42568 568 aaPredicted RBP11.61□□□□□ -0.55
VPS16-206ENST00000466415 GRK6P43250 576 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 ARL4DP49703 201 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 DIO3P55073 304 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 GFERP55789 205 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 STXBP1P61764 594 aaKnown RBP11.61□□□□□ -0.55
VPS16-206ENST00000466415 MXRA7P84157 204 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 TGM3Q08188 693 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 CUL3Q13618 768 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 AGKQ53H12 422 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 KHDRBS2Q5VWX1 349 aaKnown RBP11.61□□□□□ -0.55
VPS16-206ENST00000466415 FCRL6Q6DN72 434 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 GUSBP11Q6P575 273 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 CYP20A1Q6UW02 462 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 PRR23CQ6ZRP0 262 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 PAGE2Q7Z2X7 111 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 VN1R5Q7Z5H4 357 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 SPRED1Q7Z699 444 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 YTHDF3Q7Z739 585 aaKnown RBP11.61□□□□□ -0.55
VPS16-206ENST00000466415 ASPGQ86U10 573 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 TREML1Q86YW5 311 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 PLXDC1Q8IUK5 500 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 C1orf52Q8N6N3 182 aaKnown RBP11.61□□□□□ -0.55
VPS16-206ENST00000466415 PRSS33Q8NF86 280 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 CDC26Q8NHZ8 85 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 ATOH1Q92858 354 aaPredicted RBP11.61□□□□□ -0.55
VPS16-206ENST00000466415 NSL1Q96IY1 281 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 PPM1MQ96MI6 270 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 SARGQ9BW04 601 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 EBPLQ9BY08 206 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 MRPL1Q9BYD6 325 aaKnown RBP11.61□□□□□ -0.55
VPS16-206ENST00000466415 NLNQ9BYT8 704 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 BRINP2Q9C0B6 783 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 RAB33BQ9H082 229 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 C1GALT1Q9NS00 363 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 ARL8BQ9NVJ2 186 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 ZIM2Q9NZV7 527 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 CCDC167Q9P0B6 97 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 EPHA6Q9UF33 1036 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 KLHL3Q9UH77 587 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 TAGLN3Q9UI15 199 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 PCDHGB2Q9Y5G2 931 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 KLK4Q9Y5K2 254 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 AP1M2Q9Y6Q5 423 aa11.61□□□□□ -0.55
VPS16-206ENST00000466415 ARHGEF17Q96PE2 2063 aaPredicted RBP11.6□□□□□ -0.55
VPS16-206ENST00000466415 GNG14A0A1W2PPG7 69 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 LNP1A1A4G5 178 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 ARHGAP10A1A4S6 786 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 URADA6NGE7 173 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 SLC9B1P1A6NJY1 282 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 CAPN14A8MX76 684 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 NR5A2O00482 541 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 FLRT2O43155 660 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 PCDH7O60245 1069 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 HNRNPCL1O60812 293 aaKnown RBP11.6□□□□□ -0.55
VPS16-206ENST00000466415 STATHP02808 62 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 ZNF806P0C7X5 589 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 THRAP10827 490 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 G6PDP11413 515 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 COX4I1P13073 169 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 HOXB3P14651 431 aaPredicted RBP11.6□□□□□ -0.55
VPS16-206ENST00000466415 ST6GAL1P15907 406 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 TIA1P31483 386 aaKnown RBP eCLIP11.6□□□□□ -0.55
VPS16-206ENST00000466415 LSSP48449 732 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 RASSF2P50749 326 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 MNAT1P51948 309 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 KCNK10P57789 538 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 BNIP1Q12981 228 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 CYLC2Q14093 348 aaPredicted RBP11.6□□□□□ -0.55
VPS16-206ENST00000466415 HERC3Q15034 1050 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 TMEM35AQ53FP2 167 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 ZC3H12BQ5HYM0 836 aaKnown RBP11.6□□□□□ -0.55
VPS16-206ENST00000466415 TOR1AIP1Q5JTV8 583 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 DEPDC1Q5TB30 811 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 NOXRED1Q6NXP6 359 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 PAOXQ6QHF9 649 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 GK5Q6ZS86 529 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 RNF44Q7L0R7 432 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 NUDT13Q86X67 352 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 SNX32Q86XE0 403 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 METTL4Q8N3J2 472 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 CAMKVQ8NCB2 501 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 IFI44Q8TCB0 444 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 SLC13A3Q8WWT9 602 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 N4BP2L2Q92802 583 aaPredicted RBP11.6□□□□□ -0.55
VPS16-206ENST00000466415 RGMAQ96B86 450 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 QRFPRQ96P65 431 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 TRAPPC9Q96Q05 1148 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 MAP3K3Q99759 626 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 EDEM2Q9BV94 578 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 DPY30Q9C005 99 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 REXO4Q9GZR2 422 aaKnown RBP11.6□□□□□ -0.55
VPS16-206ENST00000466415 KCNH6Q9H252 994 aa11.6□□□□□ -0.55
VPS16-206ENST00000466415 SDR39U1Q9NRG7 319 aaPredicted RBP11.6□□□□□ -0.55
VPS16-206ENST00000466415 DNAAF2Q9NVR5 837 aaKnown RBP11.6□□□□□ -0.55
VPS16-206ENST00000466415 GPR45Q9Y5Y3 372 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms