RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 ACAT2Q9BWD1 397 aa16.7■□□□□ 0.26
CPSF4-209ENST00000465132 DRC3Q9H069 523 aa16.7■□□□□ 0.26
CPSF4-209ENST00000465132 PELI2Q9HAT8 420 aa16.7■□□□□ 0.26
CPSF4-209ENST00000465132 EMCNQ9ULC0 261 aa16.7■□□□□ 0.26
CPSF4-209ENST00000465132 PADI1Q9ULC6 663 aa16.7■□□□□ 0.26
CPSF4-209ENST00000465132 PCDHGA6Q9Y5G7 932 aa16.7■□□□□ 0.26
CPSF4-209ENST00000465132 FLNCQ14315 2725 aa16.69■□□□□ 0.26
CPSF4-209ENST00000465132 TMEM120BA0PK00 339 aa16.69■□□□□ 0.26
CPSF4-209ENST00000465132 MKRN2OSH3BPM6 223 aa16.69■□□□□ 0.26
CPSF4-209ENST00000465132 K7EM74 188 aa16.69■□□□□ 0.26
CPSF4-209ENST00000465132 TAPBPO15533 448 aa16.69■□□□□ 0.26
CPSF4-209ENST00000465132 DLX3O60479 287 aa16.69■□□□□ 0.26
CPSF4-209ENST00000465132 UGDHO60701 494 aa16.69■□□□□ 0.26
CPSF4-209ENST00000465132 CREG1O75629 220 aa16.69■□□□□ 0.26
CPSF4-209ENST00000465132 EZRP15311 586 aaKnown RBP16.69■□□□□ 0.26
CPSF4-209ENST00000465132 NR1D1P20393 614 aa16.69■□□□□ 0.26
CPSF4-209ENST00000465132 GSTM2P28161 218 aa16.69■□□□□ 0.26
CPSF4-209ENST00000465132 HPDP32754 393 aaPredicted RBP16.69■□□□□ 0.26
CPSF4-209ENST00000465132 DNASE1L3Q13609 305 aa16.69■□□□□ 0.26
CPSF4-209ENST00000465132 FIGLAQ6QHK4 219 aa16.69■□□□□ 0.26
CPSF4-209ENST00000465132 ADCK2Q7Z695 626 aa16.69■□□□□ 0.26
CPSF4-209ENST00000465132 NUDCD3Q8IVD9 361 aa16.69■□□□□ 0.26
CPSF4-209ENST00000465132 TEX9Q8N6V9 391 aa16.69■□□□□ 0.26
CPSF4-209ENST00000465132 ZNF655Q8N720 491 aaPredicted RBP16.69■□□□□ 0.26
CPSF4-209ENST00000465132 REPS1Q96D71 796 aa16.69■□□□□ 0.26
CPSF4-209ENST00000465132 THAP11Q96EK4 314 aa16.69■□□□□ 0.26
CPSF4-209ENST00000465132 SEC16BQ96JE7 1060 aa16.69■□□□□ 0.26
CPSF4-209ENST00000465132 SLC41A2Q96JW4 573 aa16.69■□□□□ 0.26
CPSF4-209ENST00000465132 TRAPPC9Q96Q05 1148 aa16.69■□□□□ 0.26
CPSF4-209ENST00000465132 SELENOSQ9BQE4 189 aa16.69■□□□□ 0.26
CPSF4-209ENST00000465132 AIF1LQ9BQI0 150 aa16.69■□□□□ 0.26
CPSF4-209ENST00000465132 TMEM79Q9BSE2 394 aa16.69■□□□□ 0.26
CPSF4-209ENST00000465132 DPH7Q9BTV6 452 aa16.69■□□□□ 0.26
CPSF4-209ENST00000465132 NLNQ9BYT8 704 aa16.69■□□□□ 0.26
CPSF4-209ENST00000465132 EML4Q9HC35 981 aaKnown RBP16.69■□□□□ 0.26
CPSF4-209ENST00000465132 BTRCQ9Y297 605 aa16.69■□□□□ 0.26
CPSF4-209ENST00000465132 CDC14CA4D256 554 aa16.68■□□□□ 0.26
CPSF4-209ENST00000465132 KRT87PA6NCN2 255 aa16.68■□□□□ 0.26
CPSF4-209ENST00000465132 SLC9B1P1A6NJY1 282 aa16.68■□□□□ 0.26
CPSF4-209ENST00000465132 G3V2L1 256 aa16.68■□□□□ 0.26
CPSF4-209ENST00000465132 TXNDC9O14530 226 aa16.68■□□□□ 0.26
CPSF4-209ENST00000465132 SUPT7LO94864 414 aa16.68■□□□□ 0.26
CPSF4-209ENST00000465132 TIAF1O95411 115 aa16.68■□□□□ 0.26
CPSF4-209ENST00000465132 RECKO95980 971 aa16.68■□□□□ 0.26
CPSF4-209ENST00000465132 OTCP00480 354 aa16.68■□□□□ 0.26
CPSF4-209ENST00000465132 MSL3P1P0C860 447 aa16.68■□□□□ 0.26
CPSF4-209ENST00000465132 PEBP1P30086 187 aaKnown RBP16.68■□□□□ 0.26
CPSF4-209ENST00000465132 ARL1P40616 181 aaPredicted RBP16.68■□□□□ 0.26
CPSF4-209ENST00000465132 HNF4AP41235 474 aa16.68■□□□□ 0.26
CPSF4-209ENST00000465132 GRIA3P42263 894 aa16.68■□□□□ 0.26
CPSF4-209ENST00000465132 PPP1CAP62136 330 aa16.68■□□□□ 0.26
CPSF4-209ENST00000465132 RPS15AP62244 130 aaKnown RBP16.68■□□□□ 0.26
CPSF4-209ENST00000465132 IRF8Q02556 426 aa16.68■□□□□ 0.26
CPSF4-209ENST00000465132 PCDH1Q08174 1060 aa16.68■□□□□ 0.26
CPSF4-209ENST00000465132 GTF2H2Q13888 395 aa16.68■□□□□ 0.26
CPSF4-209ENST00000465132 TBCCQ15814 346 aa16.68■□□□□ 0.26
CPSF4-209ENST00000465132 C10orf62Q5T681 223 aaPredicted RBP16.68■□□□□ 0.26
CPSF4-209ENST00000465132 GTF2H2CQ6P1K8 395 aa16.68■□□□□ 0.26
CPSF4-209ENST00000465132 SPNS2Q8IVW8 549 aa16.68■□□□□ 0.26
CPSF4-209ENST00000465132 ABHD11Q8NFV4 315 aa16.68■□□□□ 0.26
CPSF4-209ENST00000465132 TTLQ8NG68 377 aa16.68■□□□□ 0.26
CPSF4-209ENST00000465132 CT55Q8WUE5 264 aa16.68■□□□□ 0.26
CPSF4-209ENST00000465132 MIB2Q96AX9 1013 aa16.68■□□□□ 0.26
CPSF4-209ENST00000465132 ARL8AQ96BM9 186 aa16.68■□□□□ 0.26
CPSF4-209ENST00000465132 PTCD3Q96EY7 689 aaKnown RBP16.68■□□□□ 0.26
CPSF4-209ENST00000465132 LHX9Q9NQ69 397 aa16.68■□□□□ 0.26
CPSF4-209ENST00000465132 SLC17A7Q9P2U7 560 aa16.68■□□□□ 0.26
CPSF4-209ENST00000465132 NBASA2RRP1 2371 aa16.68■□□□□ 0.26
CPSF4-209ENST00000465132 RELNP78509 3460 aa16.68■□□□□ 0.26
CPSF4-209ENST00000465132 COL12A1Q99715 3063 aa16.67■□□□□ 0.26
CPSF4-209ENST00000465132 IGHV5-51A0A0C4DH38 117 aa16.67■□□□□ 0.26
CPSF4-209ENST00000465132 SRPX2O60687 465 aaPredicted RBP16.67■□□□□ 0.26
CPSF4-209ENST00000465132 BPGMP07738 259 aa16.67■□□□□ 0.26
CPSF4-209ENST00000465132 RPS17P08708 135 aaKnown RBP16.67■□□□□ 0.26
CPSF4-209ENST00000465132 SBK3P0C264 359 aa16.67■□□□□ 0.26
CPSF4-209ENST00000465132 C1GALT1C1LP0DN25 315 aa16.67■□□□□ 0.26
CPSF4-209ENST00000465132 MAGP20916 626 aa16.67■□□□□ 0.26
CPSF4-209ENST00000465132 GRK2P25098 689 aa16.67■□□□□ 0.26
CPSF4-209ENST00000465132 SERPINB1P30740 379 aa16.67■□□□□ 0.26
CPSF4-209ENST00000465132 CASP2P42575 452 aa16.67■□□□□ 0.26
CPSF4-209ENST00000465132 GDF5P43026 501 aa16.67■□□□□ 0.26
CPSF4-209ENST00000465132 SERPINB4P48594 390 aa16.67■□□□□ 0.26
CPSF4-209ENST00000465132 CCNG1P51959 295 aa16.67■□□□□ 0.26
CPSF4-209ENST00000465132 PPP2R2AP63151 447 aa16.67■□□□□ 0.26
CPSF4-209ENST00000465132 TUBB3Q13509 450 aa16.67■□□□□ 0.26
CPSF4-209ENST00000465132 XKR6Q5GH73 641 aa16.67■□□□□ 0.26
CPSF4-209ENST00000465132 ZNF678Q5SXM1 525 aa16.67■□□□□ 0.26
CPSF4-209ENST00000465132 LIPJQ5W064 366 aa16.67■□□□□ 0.26
CPSF4-209ENST00000465132 ATG9BQ674R7 924 aa16.67■□□□□ 0.26
CPSF4-209ENST00000465132 PWWP2BQ6NUJ5 590 aa16.67■□□□□ 0.26
CPSF4-209ENST00000465132 NXPE4Q6UWF7 544 aa16.67■□□□□ 0.26
CPSF4-209ENST00000465132 ASB18Q6ZVZ8 466 aa16.67■□□□□ 0.26
CPSF4-209ENST00000465132 D2HGDHQ8N465 521 aa16.67■□□□□ 0.26
CPSF4-209ENST00000465132 FAM26EQ8N5C1 309 aa16.67■□□□□ 0.26
CPSF4-209ENST00000465132 CCNYL1Q8N7R7 359 aa16.67■□□□□ 0.26
CPSF4-209ENST00000465132 ANKRD42Q8N9B4 389 aa16.67■□□□□ 0.26
CPSF4-209ENST00000465132 TEX19Q8NA77 164 aa16.67■□□□□ 0.26
CPSF4-209ENST00000465132 FLVCR1-AS1Q8TAF5 88 aa16.67■□□□□ 0.26
CPSF4-209ENST00000465132 RAB3IL1Q8TBN0 382 aa16.67■□□□□ 0.26
CPSF4-209ENST00000465132 RERGQ96A58 199 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms