RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 RPTNQ6XPR3 784 aa21.48■■□□□ 1.03
USP42-205ENST00000465073 ASPGQ86U10 573 aa21.48■■□□□ 1.03
USP42-205ENST00000465073 MCEMP1Q8IX19 187 aa21.48■■□□□ 1.03
USP42-205ENST00000465073 BEST3Q8N1M1 668 aa21.48■■□□□ 1.03
USP42-205ENST00000465073 AGGF1Q8N302 714 aaeCLIP21.48■■□□□ 1.03
USP42-205ENST00000465073 RASGEF1CQ8N431 466 aa21.48■■□□□ 1.03
USP42-205ENST00000465073 ZNF808Q8N4W9 903 aaPredicted RBP21.48■■□□□ 1.03
USP42-205ENST00000465073 KCT2Q8NC54 265 aa21.48■■□□□ 1.03
USP42-205ENST00000465073 EEF1AKMT1Q8WVE0 214 aa21.48■■□□□ 1.03
USP42-205ENST00000465073 SLC13A3Q8WWT9 602 aa21.48■■□□□ 1.03
USP42-205ENST00000465073 TAS2R13Q9NYV9 303 aa21.48■■□□□ 1.03
USP42-205ENST00000465073 ADAMTS6Q9UKP5 1117 aa21.48■■□□□ 1.03
USP42-205ENST00000465073 SLC22A7Q9Y694 548 aa21.48■■□□□ 1.03
USP42-205ENST00000465073 APCP25054 2843 aa21.48■■□□□ 1.03
USP42-205ENST00000465073 SP140Q13342 867 aa21.47■■□□□ 1.03
USP42-205ENST00000465073 FCRLBQ6BAA4 426 aa21.47■■□□□ 1.03
USP42-205ENST00000465073 CAPN13Q6MZZ7 669 aaPredicted RBP21.47■■□□□ 1.03
USP42-205ENST00000465073 MRGPRGQ86SM5 289 aa21.47■■□□□ 1.03
USP42-205ENST00000465073 SHISA5Q8N114 240 aa21.47■■□□□ 1.03
USP42-205ENST00000465073 NAT8LQ8N9F0 302 aa21.47■■□□□ 1.03
USP42-205ENST00000465073 SGPP1Q9BX95 441 aa21.47■■□□□ 1.03
USP42-205ENST00000465073 IARS2Q9NSE4 1012 aaKnown RBP21.47■■□□□ 1.03
USP42-205ENST00000465073 SH2B3Q9UQQ2 575 aa21.47■■□□□ 1.03
USP42-205ENST00000465073 FEZF1A0PJY2 475 aa21.46■■□□□ 1.03
USP42-205ENST00000465073 OR2W5A6NFC9 320 aa21.46■■□□□ 1.03
USP42-205ENST00000465073 SLC16A5O15375 505 aa21.46■■□□□ 1.03
USP42-205ENST00000465073 TTI1O43156 1089 aa21.46■■□□□ 1.03
USP42-205ENST00000465073 LCMT2O60294 686 aaKnown RBP21.46■■□□□ 1.03
USP42-205ENST00000465073 SRSF11Q05519 484 aaKnown RBP21.46■■□□□ 1.03
USP42-205ENST00000465073 ACTN3Q08043 901 aaPredicted RBP21.46■■□□□ 1.03
USP42-205ENST00000465073 NAE1Q13564 534 aa21.46■■□□□ 1.03
USP42-205ENST00000465073 TUBA3CQ13748 450 aa21.46■■□□□ 1.03
USP42-205ENST00000465073 CYP1B1Q16678 543 aa21.46■■□□□ 1.03
USP42-205ENST00000465073 MEP1AQ16819 746 aa21.46■■□□□ 1.03
USP42-205ENST00000465073 TUBA3EQ6PEY2 450 aa21.46■■□□□ 1.03
USP42-205ENST00000465073 CCDC137Q6PK04 289 aaKnown RBP21.46■■□□□ 1.03
USP42-205ENST00000465073 LCTLQ6UWM7 567 aa21.46■■□□□ 1.03
USP42-205ENST00000465073 BNC2Q6ZN30 1099 aaPredicted RBP21.46■■□□□ 1.03
USP42-205ENST00000465073 SLC26A11Q86WA9 606 aa21.46■■□□□ 1.03
USP42-205ENST00000465073 PDSS2Q86YH6 399 aa21.46■■□□□ 1.03
USP42-205ENST00000465073 MFSD9Q8NBP5 474 aa21.46■■□□□ 1.03
USP42-205ENST00000465073 PLPP5Q8NEB5 264 aa21.46■■□□□ 1.03
USP42-205ENST00000465073 GABPB2Q8TAK5 448 aaPredicted RBP21.46■■□□□ 1.03
USP42-205ENST00000465073 ZCCHC10Q8TBK6 192 aa21.46■■□□□ 1.03
USP42-205ENST00000465073 PBKQ96KB5 322 aa21.46■■□□□ 1.03
USP42-205ENST00000465073 OR1F2PQ96R84 312 aa21.46■■□□□ 1.03
USP42-205ENST00000465073 NAP1L3Q99457 506 aaPredicted RBP21.46■■□□□ 1.03
USP42-205ENST00000465073 ATG10Q9H0Y0 220 aa21.46■■□□□ 1.03
USP42-205ENST00000465073 MMP25Q9NPA2 562 aa21.46■■□□□ 1.03
USP42-205ENST00000465073 CHST11Q9NPF2 352 aa21.46■■□□□ 1.03
USP42-205ENST00000465073 NAALAD2Q9Y3Q0 740 aa21.46■■□□□ 1.03
USP42-205ENST00000465073 SLC19A2O60779 497 aa21.45■■□□□ 1.03
USP42-205ENST00000465073 RDH16O75452 317 aa21.45■■□□□ 1.03
USP42-205ENST00000465073 SLC35G6P0C7Q6 338 aa21.45■■□□□ 1.03
USP42-205ENST00000465073 NPPBP16860 134 aa21.45■■□□□ 1.03
USP42-205ENST00000465073 TIAL1Q01085 375 aaKnown RBP eCLIP21.45■■□□□ 1.03
USP42-205ENST00000465073 PMP22Q01453 160 aa21.45■■□□□ 1.03
USP42-205ENST00000465073 NSDHLQ15738 373 aa21.45■■□□□ 1.03
USP42-205ENST00000465073 MYO1HQ8N1T3 1032 aa21.45■■□□□ 1.03
USP42-205ENST00000465073 C2CD4AQ8NCU7 369 aaPredicted RBP21.45■■□□□ 1.03
USP42-205ENST00000465073 MDS2Q8NDY4 140 aa21.45■■□□□ 1.03
USP42-205ENST00000465073 ALKBH8Q96BT7 664 aaKnown RBP21.45■■□□□ 1.03
USP42-205ENST00000465073 MS4A14Q96JA4 679 aa21.45■■□□□ 1.03
USP42-205ENST00000465073 SCN2AQ99250 2005 aa21.45■■□□□ 1.03
USP42-205ENST00000465073 NDNQ99608 321 aa21.45■■□□□ 1.03
USP42-205ENST00000465073 UTP23Q9BRU9 249 aaKnown RBP21.45■■□□□ 1.03
USP42-205ENST00000465073 HAUS8Q9BT25 410 aa21.45■■□□□ 1.03
USP42-205ENST00000465073 MLYCDO95822 493 aa21.45■■□□□ 1.02
USP42-205ENST00000465073 HIST1H2AGP0C0S8 130 aaPredicted RBP21.45■■□□□ 1.02
USP42-205ENST00000465073 CDH1P12830 882 aa21.45■■□□□ 1.02
USP42-205ENST00000465073 HIST1H2ADP20671 130 aa21.45■■□□□ 1.02
USP42-205ENST00000465073 ELAVL4P26378 380 aaKnown RBP21.45■■□□□ 1.02
USP42-205ENST00000465073 GRNP28799 593 aaKnown RBP21.45■■□□□ 1.02
USP42-205ENST00000465073 CD96P40200 585 aa21.45■■□□□ 1.02
USP42-205ENST00000465073 RHAGQ02094 409 aa21.45■■□□□ 1.02
USP42-205ENST00000465073 ABRAXAS2Q15018 415 aa21.45■■□□□ 1.02
USP42-205ENST00000465073 HERC3Q15034 1050 aa21.45■■□□□ 1.02
USP42-205ENST00000465073 KRTCAP3Q53RY4 240 aa21.45■■□□□ 1.02
USP42-205ENST00000465073 SFT2D3Q587I9 215 aa21.45■■□□□ 1.02
USP42-205ENST00000465073 PAPD4Q6PIY7 484 aaKnown RBP21.45■■□□□ 1.02
USP42-205ENST00000465073 XKRXQ6PP77 449 aa21.45■■□□□ 1.02
USP42-205ENST00000465073 PAQR3Q6TCH7 311 aa21.45■■□□□ 1.02
USP42-205ENST00000465073 MBOAT1Q6ZNC8 495 aa21.45■■□□□ 1.02
USP42-205ENST00000465073 CRLF3Q8IUI8 442 aa21.45■■□□□ 1.02
USP42-205ENST00000465073 LRRC8AQ8IWT6 810 aa21.45■■□□□ 1.02
USP42-205ENST00000465073 PPIL6Q8IXY8 311 aa21.45■■□□□ 1.02
USP42-205ENST00000465073 SLC5A8Q8N695 610 aa21.45■■□□□ 1.02
USP42-205ENST00000465073 ABHD11Q8NFV4 315 aa21.45■■□□□ 1.02
USP42-205ENST00000465073 THAP3Q8WTV1 239 aaPredicted RBP21.45■■□□□ 1.02
USP42-205ENST00000465073 HIST1H2AHQ96KK5 128 aa21.45■■□□□ 1.02
USP42-205ENST00000465073 LPAR4Q99677 370 aa21.45■■□□□ 1.02
USP42-205ENST00000465073 HIST1H2AJQ99878 128 aa21.45■■□□□ 1.02
USP42-205ENST00000465073 H2AFJQ9BTM1 129 aa21.45■■□□□ 1.02
USP42-205ENST00000465073 JRKLQ9Y4A0 524 aa21.45■■□□□ 1.02
USP42-205ENST00000465073 MAGEB17A8MXT2 336 aa21.44■■□□□ 1.02
USP42-205ENST00000465073 PGAM1P18669 254 aa21.44■■□□□ 1.02
USP42-205ENST00000465073 HTR1EP28566 365 aa21.44■■□□□ 1.02
USP42-205ENST00000465073 OR1C1Q15619 314 aa21.44■■□□□ 1.02
USP42-205ENST00000465073 ZNF630Q2M218 657 aaPredicted RBP21.44■■□□□ 1.02
USP42-205ENST00000465073 HORMAD2Q8N7B1 307 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms