RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 PGBD5Q8N414 524 aa11.15□□□□□ -0.63
TNRC6A-205ENST00000464539 LPCAT1Q8NF37 534 aa11.15□□□□□ -0.63
TNRC6A-205ENST00000464539 MSLNLQ96KJ4 702 aa11.15□□□□□ -0.63
TNRC6A-205ENST00000464539 GPR137Q96N19 417 aa11.15□□□□□ -0.63
TNRC6A-205ENST00000464539 ZSCAN5AQ9BUG6 496 aa11.15□□□□□ -0.63
TNRC6A-205ENST00000464539 SPATA9Q9BWV2 254 aa11.15□□□□□ -0.63
TNRC6A-205ENST00000464539 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.15□□□□□ -0.63
TNRC6A-205ENST00000464539 PTTG3PQ9NZH4 202 aa11.15□□□□□ -0.63
TNRC6A-205ENST00000464539 A0A0B4J293 547 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 FABP12A6NFH5 140 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 ZNF670-ZNF695F2Z2N8 137 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 MYL12BO14950 172 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 AKR7A2O43488 359 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 SLC43A1O75387 559 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 GPX5O75715 221 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 VIPP01282 170 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 EPOP01588 193 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 HLA-DQB1P01920 261 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 ESR1P03372 595 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 SCG5P05408 212 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 CSF3P09919 207 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 HSMCR30P0CW71 290 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 HOXB9P17482 250 aaPredicted RBP11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 GABRB1P18505 474 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 MYL12AP19105 171 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 HLA-DPA1P20036 260 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 ITGB7P26010 798 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 PTBP1P26599 531 aaKnown RBP eCLIP11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 CCR1P32246 355 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 KDELR2P33947 212 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 RPS19P39019 145 aaKnown RBP11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 RABGGTBP53611 331 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 NRG1Q02297 640 aaPredicted RBP11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 KCNC3Q14003 757 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 LAPTM4AQ15012 233 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 ZNF792Q3KQV3 632 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 SIRPB2Q5JXA9 342 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 SAXO2Q658L1 398 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 SLC27A1Q6PCB7 646 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 OTOP2Q7RTS6 562 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 GPALPP1Q8IXQ4 340 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 CLDN22Q8N7P3 220 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 BRSK1Q8TDC3 778 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 RNF31Q96EP0 1072 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 METTL2AQ96IZ6 378 aaKnown RBP11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 SAMD11Q96NU1 681 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 PPP1R16BQ96T49 567 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 SIK2Q9H0K1 926 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 TRIM45Q9H8W5 580 aaPredicted RBP11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 AASDHPPTQ9NRN7 309 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 GPR83Q9NYM4 423 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 ENOPH1Q9UHY7 261 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 EIF2B4Q9UI10 523 aaKnown RBP11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 POFUT2Q9Y2G5 429 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 HSPB11Q9Y547 144 aa11.14□□□□□ -0.63
TNRC6A-205ENST00000464539 MYLKQ15746 1914 aa11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 SLC12A8A0AV02 714 aa11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 NPEPPSL1A6NEC2 478 aa11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 MEN1O00255 615 aa11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 DUSP11O75319 330 aaKnown RBP11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 SERPINI2O75830 405 aa11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 IL1AP01583 271 aa11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 FGF1P05230 155 aa11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 USP17L7P0C7H9 530 aa11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 PIPP12273 146 aaPredicted RBP11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 INSRRP14616 1297 aa11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 TNNI3P19429 210 aa11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 PSMA1P25786 263 aaKnown RBP11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 HLA-FP30511 346 aa11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 CD86P42081 329 aa11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 MAP2K3P46734 347 aa11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 HTR6P50406 440 aa11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 IL2P60568 153 aa11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 RRAS2P62070 204 aaPredicted RBP11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 DAB2P98082 770 aa11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 NHLH1Q02575 133 aa11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 TATDN3Q17R31 274 aa11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 ZMAT1Q5H9K5 638 aa11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 MARC1Q5VT66 337 aa11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 TRIM46Q7Z4K8 759 aa11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 TRIM48Q8IWZ4 208 aa11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 RTL3Q8N8U3 475 aaKnown RBP11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 OR52B6Q8NGF0 335 aa11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 OR8H1Q8NGG4 311 aa11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 C8orf48Q96LL4 319 aa11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 CNPPD1Q9BV87 410 aa11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 HDHD5Q9BXW7 423 aa11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 BEX2Q9BXY8 128 aa11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 BARHL1Q9BZE3 327 aa11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 SPNS1Q9H2V7 528 aa11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 RBFOX1Q9NWB1 397 aaKnown RBP11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 ZNF226Q9NYT6 803 aa11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 PCDHGB7Q9Y5F8 929 aa11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 COL11A1P12107 1806 aaPredicted RBP11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 CHD9Q3L8U1 2897 aa11.13□□□□□ -0.63
TNRC6A-205ENST00000464539 PLA2G10O15496 165 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 ORC5O43913 435 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 PEX11BO96011 259 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 IGLV3-25P01717 112 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 IFNA16P05015 189 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms