RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 TMEM178AQ8NBL3 297 aa3.63□□□□□ -1.83
CLK1-208ENST00000464454 MRGPRDQ8TDS7 321 aa3.63□□□□□ -1.83
CLK1-208ENST00000464454 ARHGAP45Q92619 1136 aa3.63□□□□□ -1.83
CLK1-208ENST00000464454 C10orf90Q96M02 699 aa3.63□□□□□ -1.83
CLK1-208ENST00000464454 CCDC43Q96MW1 224 aaKnown RBP3.63□□□□□ -1.83
CLK1-208ENST00000464454 C17orf62Q9BQA9 187 aa3.63□□□□□ -1.83
CLK1-208ENST00000464454 NACAP1Q9BZK3 213 aa3.63□□□□□ -1.83
CLK1-208ENST00000464454 THAP2Q9H0W7 228 aa3.63□□□□□ -1.83
CLK1-208ENST00000464454 WDR13Q9H1Z4 485 aa3.63□□□□□ -1.83
CLK1-208ENST00000464454 ZNF71Q9NQZ8 489 aaPredicted RBP3.63□□□□□ -1.83
CLK1-208ENST00000464454 CNIH4Q9P003 139 aa3.63□□□□□ -1.83
CLK1-208ENST00000464454 GPR132Q9UNW8 380 aa3.63□□□□□ -1.83
CLK1-208ENST00000464454 ACEP12821 1306 aa3.63□□□□□ -1.83
CLK1-208ENST00000464454 A0A087WW49 117 aa3.62□□□□□ -1.83
CLK1-208ENST00000464454 C13orf42A0A1B0GVH6 325 aa3.62□□□□□ -1.83
CLK1-208ENST00000464454 NR5A2O00482 541 aa3.62□□□□□ -1.83
CLK1-208ENST00000464454 GOSR1O95249 250 aa3.62□□□□□ -1.83
CLK1-208ENST00000464454 SERPINB2P05120 415 aa3.62□□□□□ -1.83
CLK1-208ENST00000464454 CD59P13987 128 aa3.62□□□□□ -1.83
CLK1-208ENST00000464454 PTPN14Q15678 1187 aa3.62□□□□□ -1.83
CLK1-208ENST00000464454 ZNF74Q16587 644 aa3.62□□□□□ -1.83
CLK1-208ENST00000464454 KRTAP27-1Q3LI81 207 aa3.62□□□□□ -1.83
CLK1-208ENST00000464454 ZFP69Q49AA0 526 aa3.62□□□□□ -1.83
CLK1-208ENST00000464454 FGD3Q5JSP0 725 aa3.62□□□□□ -1.83
CLK1-208ENST00000464454 PODNL1Q6PEZ8 512 aa3.62□□□□□ -1.83
CLK1-208ENST00000464454 SLC25A47Q6Q0C1 308 aa3.62□□□□□ -1.83
CLK1-208ENST00000464454 FCRLAQ7L513 359 aa3.62□□□□□ -1.83
CLK1-208ENST00000464454 GPC2Q8N158 579 aa3.62□□□□□ -1.83
CLK1-208ENST00000464454 LRTM2Q8N967 370 aa3.62□□□□□ -1.83
CLK1-208ENST00000464454 KIAA0895Q8NCT3 520 aa3.62□□□□□ -1.83
CLK1-208ENST00000464454 OR4C15Q8NGM1 316 aa3.62□□□□□ -1.83
CLK1-208ENST00000464454 OR10G8Q8NGN5 311 aa3.62□□□□□ -1.83
CLK1-208ENST00000464454 APOBEC4Q8WW27 367 aaKnown RBP3.62□□□□□ -1.83
CLK1-208ENST00000464454 ALKBH7Q9BT30 221 aaPredicted RBP3.62□□□□□ -1.83
CLK1-208ENST00000464454 IDI2Q9BXS1 227 aa3.62□□□□□ -1.83
CLK1-208ENST00000464454 P2RY12Q9H244 342 aa3.62□□□□□ -1.83
CLK1-208ENST00000464454 EGLN3Q9H6Z9 239 aa3.62□□□□□ -1.83
CLK1-208ENST00000464454 RPF1Q9H9Y2 349 aaKnown RBP3.62□□□□□ -1.83
CLK1-208ENST00000464454 FGF22Q9HCT0 170 aa3.62□□□□□ -1.83
CLK1-208ENST00000464454 RAB9BQ9NP90 201 aa3.62□□□□□ -1.83
CLK1-208ENST00000464454 IARS2Q9NSE4 1012 aaKnown RBP3.62□□□□□ -1.83
CLK1-208ENST00000464454 MTRRQ9UBK8 725 aa3.62□□□□□ -1.83
CLK1-208ENST00000464454 NOCTQ9UK39 431 aaKnown RBP3.62□□□□□ -1.83
CLK1-208ENST00000464454 ELF5Q9UKW6 265 aaPredicted RBP3.62□□□□□ -1.83
CLK1-208ENST00000464454 PPP2R2CQ9Y2T4 447 aa3.62□□□□□ -1.83
CLK1-208ENST00000464454 HBS1LQ9Y450 684 aaKnown RBP3.62□□□□□ -1.83
CLK1-208ENST00000464454 KIAA1217Q5T5P2 1943 aa3.62□□□□□ -1.83
CLK1-208ENST00000464454 DISP3Q9P2K9 1392 aa3.62□□□□□ -1.83
CLK1-208ENST00000464454 MEIOCA2RUB1 952 aa3.61□□□□□ -1.83
CLK1-208ENST00000464454 TEX28O15482 410 aa3.61□□□□□ -1.83
CLK1-208ENST00000464454 SCO2O43819 266 aa3.61□□□□□ -1.83
CLK1-208ENST00000464454 ATP9AO75110 1047 aa3.61□□□□□ -1.83
CLK1-208ENST00000464454 KHDRBS3O75525 346 aaKnown RBP3.61□□□□□ -1.83
CLK1-208ENST00000464454 SEC24AO95486 1093 aa3.61□□□□□ -1.83
CLK1-208ENST00000464454 RAF1P04049 648 aa3.61□□□□□ -1.83
CLK1-208ENST00000464454 DLATP10515 647 aaKnown RBP3.61□□□□□ -1.83
CLK1-208ENST00000464454 KRT3P12035 628 aa3.61□□□□□ -1.83
CLK1-208ENST00000464454 ZNF26P17031 533 aaPredicted RBP3.61□□□□□ -1.83
CLK1-208ENST00000464454 CEBPBP17676 345 aa3.61□□□□□ -1.83
CLK1-208ENST00000464454 ELAVL4P26378 380 aaKnown RBP3.61□□□□□ -1.83
CLK1-208ENST00000464454 OR3A1P47881 315 aa3.61□□□□□ -1.83
CLK1-208ENST00000464454 OR3A3P47888 321 aa3.61□□□□□ -1.83
CLK1-208ENST00000464454 KHKP50053 298 aa3.61□□□□□ -1.83
CLK1-208ENST00000464454 LBX1P52954 281 aa3.61□□□□□ -1.83
CLK1-208ENST00000464454 CLDN17P56750 224 aa3.61□□□□□ -1.83
CLK1-208ENST00000464454 AKAP17AQ02040 695 aaKnown RBP3.61□□□□□ -1.83
CLK1-208ENST00000464454 SP3Q02447 781 aa3.61□□□□□ -1.83
CLK1-208ENST00000464454 ARHGAP1Q07960 439 aa3.61□□□□□ -1.83
CLK1-208ENST00000464454 ABRQ12979 859 aa3.61□□□□□ -1.83
CLK1-208ENST00000464454 LRRC38Q5VT99 294 aa3.61□□□□□ -1.83
CLK1-208ENST00000464454 SLC24A5Q71RS6 500 aa3.61□□□□□ -1.83
CLK1-208ENST00000464454 KCTD9Q7L273 389 aa3.61□□□□□ -1.83
CLK1-208ENST00000464454 LACC1Q8IV20 430 aa3.61□□□□□ -1.83
CLK1-208ENST00000464454 OR5AP2Q8NGF4 316 aa3.61□□□□□ -1.83
CLK1-208ENST00000464454 CDKN2AIPNLQ96HQ2 116 aa3.61□□□□□ -1.83
CLK1-208ENST00000464454 GMPPAQ96IJ6 420 aaPredicted RBP3.61□□□□□ -1.83
CLK1-208ENST00000464454 RBM41Q96IZ5 413 aaKnown RBP3.61□□□□□ -1.83
CLK1-208ENST00000464454 MAGED4Q96JG8 741 aa3.61□□□□□ -1.83
CLK1-208ENST00000464454 ART5Q96L15 291 aa3.61□□□□□ -1.83
CLK1-208ENST00000464454 NECTIN4Q96NY8 510 aa3.61□□□□□ -1.83
CLK1-208ENST00000464454 FUCA2Q9BTY2 467 aa3.61□□□□□ -1.83
CLK1-208ENST00000464454 MAN2C1Q9NTJ4 1040 aa3.61□□□□□ -1.83
CLK1-208ENST00000464454 TBC1D13Q9NVG8 400 aa3.61□□□□□ -1.83
CLK1-208ENST00000464454 ATAD3AQ9NVI7 634 aa3.61□□□□□ -1.83
CLK1-208ENST00000464454 CWC25Q9NXE8 425 aaPredicted RBP3.61□□□□□ -1.83
CLK1-208ENST00000464454 EPHA6Q9UF33 1036 aa3.61□□□□□ -1.83
CLK1-208ENST00000464454 MRPS28Q9Y2Q9 187 aaKnown RBP3.61□□□□□ -1.83
CLK1-208ENST00000464454 PFASO15067 1338 aa3.61□□□□□ -1.83
CLK1-208ENST00000464454 A0A087WUV0 522 aaPredicted RBP3.6□□□□□ -1.83
CLK1-208ENST00000464454 E5RGE8 158 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 TTI1O43156 1089 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 NME6O75414 186 aaPredicted RBP3.6□□□□□ -1.83
CLK1-208ENST00000464454 GLCEO94923 617 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 BAG2O95816 211 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 UROSP10746 265 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 RPL35AP18077 110 aaKnown RBP3.6□□□□□ -1.83
CLK1-208ENST00000464454 RBMS1P29558 406 aaKnown RBP3.6□□□□□ -1.83
CLK1-208ENST00000464454 CTNNB1P35222 781 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 HILS1P60008 231 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 SNRPD1P62314 119 aaKnown RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms