RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 CHID1Q9BWS9 393 aa12.42□□□□□ -0.42
NUP58-206ENST00000463407 SEC61A2Q9H9S3 476 aa12.42□□□□□ -0.42
NUP58-206ENST00000463407 ZIM2Q9NZV7 527 aa12.42□□□□□ -0.42
NUP58-206ENST00000463407 ZNF222Q9UK12 451 aa12.42□□□□□ -0.42
NUP58-206ENST00000463407 MAFKO60675 156 aa12.42□□□□□ -0.42
NUP58-206ENST00000463407 NADKO95544 446 aaPredicted RBP12.42□□□□□ -0.42
NUP58-206ENST00000463407 HERC3Q15034 1050 aa12.42□□□□□ -0.42
NUP58-206ENST00000463407 AMIGO1Q86WK6 493 aa12.42□□□□□ -0.42
NUP58-206ENST00000463407 PNPLA2Q96AD5 504 aa12.42□□□□□ -0.42
NUP58-206ENST00000463407 SERPINA3P01011 423 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 HSD11B1P28845 292 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 CD47Q08722 323 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 SLC5A9Q2M3M2 681 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 CEACAM20Q6UY09 585 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 RPS27LQ71UM5 84 aaKnown RBP12.41□□□□□ -0.42
NUP58-206ENST00000463407 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.41□□□□□ -0.42
NUP58-206ENST00000463407 PJA1Q8NG27 643 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 KCNJ9Q92806 393 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 OR52B2Q96RD2 323 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 GDE1Q9NZC3 331 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 DNAJB9Q9UBS3 223 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 MBLAC1A4D2B0 266 aaPredicted RBP12.41□□□□□ -0.42
NUP58-206ENST00000463407 CCT3P49368 545 aaKnown RBP12.41□□□□□ -0.42
NUP58-206ENST00000463407 ANKRD26P1Q6NSI1 321 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 CRTC1Q6UUV9 634 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 LRRTM3Q86VH5 581 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 IGDCC3Q8IVU1 814 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 ZZZ3Q8IYH5 903 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 COQ8BQ96D53 544 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 PROZP22891 400 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 PIK3CBP42338 1070 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 CBX5P45973 191 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 DGKQP52824 942 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 CLEC12AQ5QGZ9 265 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 OR4K14Q8NGD5 310 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 CEP295NLQ96MC4 621 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 ASPNQ9BXN1 380 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 ZNF717Q9BY31 904 aaPredicted RBP12.41□□□□□ -0.42
NUP58-206ENST00000463407 POMPQ9Y244 141 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 NUP98P52948 1817 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 NWD2Q9ULI1 1742 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 C6orf47O95873 294 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 OPN1SWP03999 348 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 PEX2P28328 305 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 PXNP49023 591 aaPredicted RBP12.41□□□□□ -0.42
NUP58-206ENST00000463407 GDI2P50395 445 aaKnown RBP12.41□□□□□ -0.42
NUP58-206ENST00000463407 CASP6P55212 293 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 TCEAL1Q15170 157 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 ALG1LQ6GMV1 187 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 SLC2A7Q6PXP3 512 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 NRROSQ86YC3 692 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 TICAM1Q8IUC6 712 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 RHBDD1Q8TEB9 315 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 THAP3Q8WTV1 239 aaPredicted RBP12.41□□□□□ -0.42
NUP58-206ENST00000463407 NELL2Q99435 816 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 TBX5Q99593 518 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 C1QTNF1Q9BXJ1 281 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 PCDHAC1Q9H158 963 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 EME2A4GXA9 379 aaPredicted RBP12.41□□□□□ -0.42
NUP58-206ENST00000463407 ARHGEF33A8MVX0 844 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 CAPN5O15484 640 aaPredicted RBP12.41□□□□□ -0.42
NUP58-206ENST00000463407 OR2B3O76000 313 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 MPC1LP0DKB6 136 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 ZNF3P17036 446 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 UFM1P61960 85 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 RPS15P62841 145 aaKnown RBP12.41□□□□□ -0.42
NUP58-206ENST00000463407 IL18Q14116 193 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 C1orf189Q5VU69 101 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 TOP1MTQ969P6 601 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 KCNA7Q96RP8 456 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 GINS4Q9BRT9 223 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 MARCH7Q9H992 704 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 SMURF2Q9HAU4 748 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 POPDC3Q9HBV1 291 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 CENPMQ9NSP4 180 aa12.41□□□□□ -0.42
NUP58-206ENST00000463407 MYOCOSA0A1B0GUC4 107 aa12.4□□□□□ -0.42
NUP58-206ENST00000463407 LINGO3P0C6S8 592 aa12.4□□□□□ -0.42
NUP58-206ENST00000463407 PFKLP17858 780 aa12.4□□□□□ -0.42
NUP58-206ENST00000463407 DIABLOQ9NR28 239 aa12.4□□□□□ -0.42
NUP58-206ENST00000463407 RARRES3Q9UL19 164 aa12.4□□□□□ -0.42
NUP58-206ENST00000463407 HMGB3O15347 200 aaKnown RBP12.4□□□□□ -0.42
NUP58-206ENST00000463407 SYNGR4O95473 234 aa12.4□□□□□ -0.42
NUP58-206ENST00000463407 ASGR2P07307 311 aa12.4□□□□□ -0.42
NUP58-206ENST00000463407 ZNF20P17024 532 aa12.4□□□□□ -0.42
NUP58-206ENST00000463407 SUOXP51687 545 aa12.4□□□□□ -0.42
NUP58-206ENST00000463407 EEFSECP57772 596 aaKnown RBP12.4□□□□□ -0.42
NUP58-206ENST00000463407 RASGEF1BQ0VAM2 473 aa12.4□□□□□ -0.42
NUP58-206ENST00000463407 EMC10Q5UCC4 262 aa12.4□□□□□ -0.42
NUP58-206ENST00000463407 TIFABQ6ZNK6 161 aa12.4□□□□□ -0.42
NUP58-206ENST00000463407 PLXDC1Q8IUK5 500 aa12.4□□□□□ -0.42
NUP58-206ENST00000463407 ZDHHC14Q8IZN3 488 aa12.4□□□□□ -0.42
NUP58-206ENST00000463407 TOX2Q96NM4 488 aa12.4□□□□□ -0.42
NUP58-206ENST00000463407 SCML1Q9UN30 329 aa12.4□□□□□ -0.42
NUP58-206ENST00000463407 PCDHGB7Q9Y5F8 929 aa12.4□□□□□ -0.42
NUP58-206ENST00000463407 LOC110117498-PIK3R3F6TDL0 507 aa12.4□□□□□ -0.42
NUP58-206ENST00000463407 AGTR2P50052 363 aa12.4□□□□□ -0.42
NUP58-206ENST00000463407 GALNTL5Q7Z4T8 443 aa12.4□□□□□ -0.42
NUP58-206ENST00000463407 NKD1Q969G9 470 aa12.4□□□□□ -0.42
NUP58-206ENST00000463407 ATXN10Q9UBB4 475 aa12.4□□□□□ -0.42
NUP58-206ENST00000463407 COMMD3-BMI1R4GMX3 469 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms