RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 TUBA3CQ13748 450 aa18.67■□□□□ 0.58
VARS-221ENST00000463184 PPP1R7Q15435 360 aa18.67■□□□□ 0.58
VARS-221ENST00000463184 EXT1Q16394 746 aa18.67■□□□□ 0.58
VARS-221ENST00000463184 C3AR1Q16581 482 aa18.67■□□□□ 0.58
VARS-221ENST00000463184 MEP1AQ16819 746 aa18.67■□□□□ 0.58
VARS-221ENST00000463184 TUBA3EQ6PEY2 450 aa18.67■□□□□ 0.58
VARS-221ENST00000463184 SYDE1Q6ZW31 735 aaPredicted RBP18.67■□□□□ 0.58
VARS-221ENST00000463184 VN1R4Q7Z5H5 301 aa18.67■□□□□ 0.58
VARS-221ENST00000463184 PCGF5Q86SE9 256 aa18.67■□□□□ 0.58
VARS-221ENST00000463184 SPATA4Q8NEY3 305 aa18.67■□□□□ 0.58
VARS-221ENST00000463184 M1APQ8TC57 530 aa18.67■□□□□ 0.58
VARS-221ENST00000463184 GPR137Q96N19 417 aa18.67■□□□□ 0.58
VARS-221ENST00000463184 CCDC68Q9H2F9 335 aa18.67■□□□□ 0.58
VARS-221ENST00000463184 KCNK13Q9HB14 408 aa18.67■□□□□ 0.58
VARS-221ENST00000463184 ZNF835Q9Y2P0 537 aa18.67■□□□□ 0.58
VARS-221ENST00000463184 CSMD2Q7Z408 3487 aa18.67■□□□□ 0.58
VARS-221ENST00000463184 TCRBV7S3A2A0A539 114 aa18.66■□□□□ 0.58
VARS-221ENST00000463184 WISP2O76076 250 aa18.66■□□□□ 0.58
VARS-221ENST00000463184 IMPA1P29218 277 aa18.66■□□□□ 0.58
VARS-221ENST00000463184 BCL6P41182 706 aa18.66■□□□□ 0.58
VARS-221ENST00000463184 XCR1P46094 333 aa18.66■□□□□ 0.58
VARS-221ENST00000463184 VPS41P49754 854 aa18.66■□□□□ 0.58
VARS-221ENST00000463184 RIPPLY3P57055 190 aa18.66■□□□□ 0.58
VARS-221ENST00000463184 SNRPNP63162 240 aaKnown RBP18.66■□□□□ 0.58
VARS-221ENST00000463184 CUL1Q13616 776 aa18.66■□□□□ 0.58
VARS-221ENST00000463184 WHAMMP3Q1A5X7 153 aa18.66■□□□□ 0.58
VARS-221ENST00000463184 FCRLBQ6BAA4 426 aa18.66■□□□□ 0.58
VARS-221ENST00000463184 TMEM214Q6NUQ4 689 aaKnown RBP18.66■□□□□ 0.58
VARS-221ENST00000463184 CYHR1Q6ZMK1 362 aa18.66■□□□□ 0.58
VARS-221ENST00000463184 Q6ZPB1 254 aaPredicted RBP18.66■□□□□ 0.58
VARS-221ENST00000463184 ZNF572Q7Z3I7 529 aaPredicted RBP18.66■□□□□ 0.58
VARS-221ENST00000463184 ANKRD37Q7Z713 158 aa18.66■□□□□ 0.58
VARS-221ENST00000463184 MDS2Q8NDY4 140 aa18.66■□□□□ 0.58
VARS-221ENST00000463184 GIMAP7Q8NHV1 300 aa18.66■□□□□ 0.58
VARS-221ENST00000463184 KCNJ9Q92806 393 aa18.66■□□□□ 0.58
VARS-221ENST00000463184 MAGED4Q96JG8 741 aa18.66■□□□□ 0.58
VARS-221ENST00000463184 UTP23Q9BRU9 249 aaKnown RBP18.66■□□□□ 0.58
VARS-221ENST00000463184 MMP25Q9NPA2 562 aa18.66■□□□□ 0.58
VARS-221ENST00000463184 DHRS7Q9Y394 339 aa18.66■□□□□ 0.58
VARS-221ENST00000463184 PCNX1Q96RV3 2341 aa18.65■□□□□ 0.58
VARS-221ENST00000463184 MAGEB16A2A368 324 aa18.65■□□□□ 0.58
VARS-221ENST00000463184 AVILO75366 819 aa18.65■□□□□ 0.58
VARS-221ENST00000463184 STATHP02808 62 aa18.65■□□□□ 0.58
VARS-221ENST00000463184 CD46P15529 392 aa18.65■□□□□ 0.58
VARS-221ENST00000463184 EEF1DP29692 281 aaKnown RBP18.65■□□□□ 0.58
VARS-221ENST00000463184 CD96P40200 585 aa18.65■□□□□ 0.58
VARS-221ENST00000463184 DR1Q01658 176 aa18.65■□□□□ 0.58
VARS-221ENST00000463184 ALDH6A1Q02252 535 aaKnown RBP18.65■□□□□ 0.58
VARS-221ENST00000463184 DHX34Q14147 1143 aaKnown RBP18.65■□□□□ 0.58
VARS-221ENST00000463184 OR1C1Q15619 314 aa18.65■□□□□ 0.58
VARS-221ENST00000463184 ZNF470Q6ECI4 717 aa18.65■□□□□ 0.58
VARS-221ENST00000463184 CASC4Q6P4E1 433 aa18.65■□□□□ 0.58
VARS-221ENST00000463184 PRSS41Q7RTY9 318 aa18.65■□□□□ 0.58
VARS-221ENST00000463184 SPPL2CQ8IUH8 684 aa18.65■□□□□ 0.58
VARS-221ENST00000463184 CAMKVQ8NCB2 501 aa18.65■□□□□ 0.58
VARS-221ENST00000463184 ADAMTS18Q8TE60 1221 aa18.65■□□□□ 0.58
VARS-221ENST00000463184 SCMH1Q96GD3 660 aa18.65■□□□□ 0.58
VARS-221ENST00000463184 SIGLEC12Q96PQ1 595 aa18.65■□□□□ 0.58
VARS-221ENST00000463184 KRT12Q99456 494 aa18.65■□□□□ 0.58
VARS-221ENST00000463184 TRIM8Q9BZR9 551 aa18.65■□□□□ 0.58
VARS-221ENST00000463184 PCBD2Q9H0N5 130 aa18.65■□□□□ 0.58
VARS-221ENST00000463184 ANKHQ9HCJ1 492 aa18.65■□□□□ 0.58
VARS-221ENST00000463184 CCDC177Q9NQR7 707 aaPredicted RBP18.65■□□□□ 0.58
VARS-221ENST00000463184 SAMD15Q9P1V8 674 aa18.65■□□□□ 0.58
VARS-221ENST00000463184 HCN3Q9P1Z3 774 aa18.65■□□□□ 0.58
VARS-221ENST00000463184 TINAGQ9UJW2 476 aa18.65■□□□□ 0.58
VARS-221ENST00000463184 MED16Q9Y2X0 877 aa18.65■□□□□ 0.58
VARS-221ENST00000463184 FAM237BA0A1B0GVD1 139 aa18.64■□□□□ 0.57
VARS-221ENST00000463184 ASPDHA6ND91 283 aa18.64■□□□□ 0.57
VARS-221ENST00000463184 FAM227AF5H4B4 570 aa18.64■□□□□ 0.57
VARS-221ENST00000463184 SGK494L7N484 410 aa18.64■□□□□ 0.57
VARS-221ENST00000463184 CDK2AP1O14519 115 aa18.64■□□□□ 0.57
VARS-221ENST00000463184 IL1RNP18510 177 aa18.64■□□□□ 0.57
VARS-221ENST00000463184 IL10P22301 178 aa18.64■□□□□ 0.57
VARS-221ENST00000463184 MAGEA6P43360 314 aa18.64■□□□□ 0.57
VARS-221ENST00000463184 THOC5Q13769 683 aaKnown RBP18.64■□□□□ 0.57
VARS-221ENST00000463184 KCTD19Q17RG1 926 aaPredicted RBP18.64■□□□□ 0.57
VARS-221ENST00000463184 UBE2R2Q712K3 238 aaPredicted RBP18.64■□□□□ 0.57
VARS-221ENST00000463184 CRLF3Q8IUI8 442 aa18.64■□□□□ 0.57
VARS-221ENST00000463184 HORMAD2Q8N7B1 307 aa18.64■□□□□ 0.57
VARS-221ENST00000463184 TMEM178AQ8NBL3 297 aa18.64■□□□□ 0.57
VARS-221ENST00000463184 PLPP5Q8NEB5 264 aa18.64■□□□□ 0.57
VARS-221ENST00000463184 TM4SF19Q96DZ7 209 aa18.64■□□□□ 0.57
VARS-221ENST00000463184 FAM129AQ9BZQ8 928 aa18.64■□□□□ 0.57
VARS-221ENST00000463184 KLHL1Q9NR64 748 aa18.64■□□□□ 0.57
VARS-221ENST00000463184 COMMD10Q9Y6G5 202 aa18.64■□□□□ 0.57
VARS-221ENST00000463184 NCOA6Q14686 2063 aaPredicted RBP18.63■□□□□ 0.57
VARS-221ENST00000463184 OR2W5A6NFC9 320 aa18.63■□□□□ 0.57
VARS-221ENST00000463184 EIF3FO00303 357 aaPredicted RBP18.63■□□□□ 0.57
VARS-221ENST00000463184 CLDN14O95500 239 aa18.63■□□□□ 0.57
VARS-221ENST00000463184 CSNK1G2P78368 415 aa18.63■□□□□ 0.57
VARS-221ENST00000463184 ACTN3Q08043 901 aaPredicted RBP18.63■□□□□ 0.57
VARS-221ENST00000463184 CTBP1Q13363 440 aa18.63■□□□□ 0.57
VARS-221ENST00000463184 SPINK14Q6IE38 97 aa18.63■□□□□ 0.57
VARS-221ENST00000463184 ZNF549Q6P9A3 640 aa18.63■□□□□ 0.57
VARS-221ENST00000463184 DENND6AQ8IWF6 608 aa18.63■□□□□ 0.57
VARS-221ENST00000463184 SHISA5Q8N114 240 aa18.63■□□□□ 0.57
VARS-221ENST00000463184 SLC5A8Q8N695 610 aa18.63■□□□□ 0.57
VARS-221ENST00000463184 FAM98AQ8NCA5 519 aaKnown RBP18.63■□□□□ 0.57
VARS-221ENST00000463184 MTFMTQ96DP5 389 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms