RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 SLC19A2O60779 497 aa14.52□□□□□ -0.09
SKA3-204ENST00000462482 RDH16O75452 317 aa14.52□□□□□ -0.09
SKA3-204ENST00000462482 HAUS5O94927 633 aa14.52□□□□□ -0.09
SKA3-204ENST00000462482 F7P08709 466 aaPredicted RBP14.52□□□□□ -0.09
SKA3-204ENST00000462482 COX6B1P14854 86 aa14.52□□□□□ -0.09
SKA3-204ENST00000462482 MST1P26927 711 aa14.52□□□□□ -0.09
SKA3-204ENST00000462482 EEF1DP29692 281 aaKnown RBP14.52□□□□□ -0.09
SKA3-204ENST00000462482 CSNK1G2P78368 415 aa14.52□□□□□ -0.09
SKA3-204ENST00000462482 ALDH6A1Q02252 535 aaKnown RBP14.52□□□□□ -0.09
SKA3-204ENST00000462482 OC90Q02509 493 aaPredicted RBP14.52□□□□□ -0.09
SKA3-204ENST00000462482 NAE1Q13564 534 aa14.52□□□□□ -0.09
SKA3-204ENST00000462482 HERC3Q15034 1050 aa14.52□□□□□ -0.09
SKA3-204ENST00000462482 NSDHLQ15738 373 aa14.52□□□□□ -0.09
SKA3-204ENST00000462482 KRTCAP3Q53RY4 240 aa14.52□□□□□ -0.09
SKA3-204ENST00000462482 HSP90AA5PQ58FG0 334 aa14.52□□□□□ -0.09
SKA3-204ENST00000462482 FCRLBQ6BAA4 426 aa14.52□□□□□ -0.09
SKA3-204ENST00000462482 CAPN13Q6MZZ7 669 aaPredicted RBP14.52□□□□□ -0.09
SKA3-204ENST00000462482 NIPAL1Q6NVV3 410 aa14.52□□□□□ -0.09
SKA3-204ENST00000462482 XKRXQ6PP77 449 aa14.52□□□□□ -0.09
SKA3-204ENST00000462482 BNC2Q6ZN30 1099 aaPredicted RBP14.52□□□□□ -0.09
SKA3-204ENST00000462482 PRSS41Q7RTY9 318 aa14.52□□□□□ -0.09
SKA3-204ENST00000462482 BEST3Q8N1M1 668 aa14.52□□□□□ -0.09
SKA3-204ENST00000462482 TMEM178AQ8NBL3 297 aa14.52□□□□□ -0.09
SKA3-204ENST00000462482 GRK7Q8WTQ7 553 aa14.52□□□□□ -0.09
SKA3-204ENST00000462482 PBKQ96KB5 322 aa14.52□□□□□ -0.09
SKA3-204ENST00000462482 OR1F2PQ96R84 312 aa14.52□□□□□ -0.09
SKA3-204ENST00000462482 MACROD1Q9BQ69 325 aa14.52□□□□□ -0.09
SKA3-204ENST00000462482 TRIM54Q9BYV2 358 aa14.52□□□□□ -0.09
SKA3-204ENST00000462482 ATG10Q9H0Y0 220 aa14.52□□□□□ -0.09
SKA3-204ENST00000462482 IARS2Q9NSE4 1012 aaKnown RBP14.52□□□□□ -0.09
SKA3-204ENST00000462482 MED16Q9Y2X0 877 aa14.52□□□□□ -0.09
SKA3-204ENST00000462482 SLC22A7Q9Y694 548 aa14.52□□□□□ -0.09
SKA3-204ENST00000462482 CENPEQ02224 2701 aa14.52□□□□□ -0.09
SKA3-204ENST00000462482 FEZF1A0PJY2 475 aa14.51□□□□□ -0.09
SKA3-204ENST00000462482 CDH1P12830 882 aa14.51□□□□□ -0.09
SKA3-204ENST00000462482 JAK1P23458 1154 aa14.51□□□□□ -0.09
SKA3-204ENST00000462482 HTR1EP28566 365 aa14.51□□□□□ -0.09
SKA3-204ENST00000462482 PTGER4P35408 488 aa14.51□□□□□ -0.09
SKA3-204ENST00000462482 COILP38432 576 aaPredicted RBP14.51□□□□□ -0.09
SKA3-204ENST00000462482 MPP1Q00013 466 aa14.51□□□□□ -0.09
SKA3-204ENST00000462482 PMP22Q01453 160 aa14.51□□□□□ -0.09
SKA3-204ENST00000462482 TUBA3CQ13748 450 aa14.51□□□□□ -0.09
SKA3-204ENST00000462482 ABRAXAS2Q15018 415 aa14.51□□□□□ -0.09
SKA3-204ENST00000462482 OR1C1Q15619 314 aa14.51□□□□□ -0.09
SKA3-204ENST00000462482 KCTD19Q17RG1 926 aaPredicted RBP14.51□□□□□ -0.09
SKA3-204ENST00000462482 SFT2D3Q587I9 215 aa14.51□□□□□ -0.09
SKA3-204ENST00000462482 TTC27Q6P3X3 843 aa14.51□□□□□ -0.09
SKA3-204ENST00000462482 TUBA3EQ6PEY2 450 aa14.51□□□□□ -0.09
SKA3-204ENST00000462482 PAPD4Q6PIY7 484 aaKnown RBP14.51□□□□□ -0.09
SKA3-204ENST00000462482 CCDC137Q6PK04 289 aaKnown RBP14.51□□□□□ -0.09
SKA3-204ENST00000462482 LCTLQ6UWM7 567 aa14.51□□□□□ -0.09
SKA3-204ENST00000462482 GDF7Q7Z4P5 450 aa14.51□□□□□ -0.09
SKA3-204ENST00000462482 PCGF5Q86SE9 256 aa14.51□□□□□ -0.09
SKA3-204ENST00000462482 SLC26A11Q86WA9 606 aa14.51□□□□□ -0.09
SKA3-204ENST00000462482 EEF1AKMT1Q8WVE0 214 aa14.51□□□□□ -0.09
SKA3-204ENST00000462482 MMP25Q9NPA2 562 aa14.51□□□□□ -0.09
SKA3-204ENST00000462482 KLHL1Q9NR64 748 aa14.51□□□□□ -0.09
SKA3-204ENST00000462482 PDE10AQ9Y233 779 aa14.51□□□□□ -0.09
SKA3-204ENST00000462482 NAALAD2Q9Y3Q0 740 aa14.51□□□□□ -0.09
SKA3-204ENST00000462482 GOLGA6L10A0A0M3HER8 536 aa14.5□□□□□ -0.09
SKA3-204ENST00000462482 TTC4O95801 387 aa14.5□□□□□ -0.09
SKA3-204ENST00000462482 SERPIND1P05546 499 aa14.5□□□□□ -0.09
SKA3-204ENST00000462482 PRF1P14222 555 aa14.5□□□□□ -0.09
SKA3-204ENST00000462482 PGAM1P18669 254 aa14.5□□□□□ -0.09
SKA3-204ENST00000462482 CCR8P51685 355 aa14.5□□□□□ -0.09
SKA3-204ENST00000462482 OR4D2P58180 307 aa14.5□□□□□ -0.09
SKA3-204ENST00000462482 RGS1Q08116 209 aa14.5□□□□□ -0.09
SKA3-204ENST00000462482 H3F3CQ6NXT2 135 aa14.5□□□□□ -0.09
SKA3-204ENST00000462482 CRLF3Q8IUI8 442 aa14.5□□□□□ -0.09
SKA3-204ENST00000462482 PPIL6Q8IXY8 311 aa14.5□□□□□ -0.09
SKA3-204ENST00000462482 MFSD9Q8NBP5 474 aa14.5□□□□□ -0.09
SKA3-204ENST00000462482 KCT2Q8NC54 265 aa14.5□□□□□ -0.09
SKA3-204ENST00000462482 PLPP5Q8NEB5 264 aa14.5□□□□□ -0.09
SKA3-204ENST00000462482 THAP3Q8WTV1 239 aaPredicted RBP14.5□□□□□ -0.09
SKA3-204ENST00000462482 ATL1Q8WXF7 558 aa14.5□□□□□ -0.09
SKA3-204ENST00000462482 TM4SF19Q96DZ7 209 aa14.5□□□□□ -0.09
SKA3-204ENST00000462482 PEX11GQ96HA9 241 aa14.5□□□□□ -0.09
SKA3-204ENST00000462482 NDNQ99608 321 aa14.5□□□□□ -0.09
SKA3-204ENST00000462482 RBCK1Q9BYM8 510 aa14.5□□□□□ -0.09
SKA3-204ENST00000462482 ANKRD10Q9NXR5 420 aa14.5□□□□□ -0.09
SKA3-204ENST00000462482 ARL15Q9NXU5 204 aa14.5□□□□□ -0.09
SKA3-204ENST00000462482 ADAMTS6Q9UKP5 1117 aa14.5□□□□□ -0.09
SKA3-204ENST00000462482 NUP210LQ5VU65 1888 aa14.49□□□□□ -0.09
SKA3-204ENST00000462482 ITPR2Q14571 2701 aa14.49□□□□□ -0.09
SKA3-204ENST00000462482 GABRR3A8MPY1 467 aa14.49□□□□□ -0.09
SKA3-204ENST00000462482 MAGEB17A8MXT2 336 aa14.49□□□□□ -0.09
SKA3-204ENST00000462482 PGRMC1O00264 195 aaKnown RBP14.49□□□□□ -0.09
SKA3-204ENST00000462482 CDK2AP1O14519 115 aa14.49□□□□□ -0.09
SKA3-204ENST00000462482 NDC80O14777 642 aa14.49□□□□□ -0.09
SKA3-204ENST00000462482 NDUFS4O43181 175 aa14.49□□□□□ -0.09
SKA3-204ENST00000462482 OR1F1O43749 312 aa14.49□□□□□ -0.09
SKA3-204ENST00000462482 CDC123O75794 336 aaPredicted RBP14.49□□□□□ -0.09
SKA3-204ENST00000462482 CD96P40200 585 aa14.49□□□□□ -0.09
SKA3-204ENST00000462482 EFNA3P52797 238 aa14.49□□□□□ -0.09
SKA3-204ENST00000462482 IL2P60568 153 aa14.49□□□□□ -0.09
SKA3-204ENST00000462482 SRSF11Q05519 484 aaKnown RBP14.49□□□□□ -0.09
SKA3-204ENST00000462482 PDAP1Q13442 181 aaKnown RBP14.49□□□□□ -0.09
SKA3-204ENST00000462482 PWP1Q13610 501 aa14.49□□□□□ -0.09
SKA3-204ENST00000462482 PPP1R7Q15435 360 aa14.49□□□□□ -0.09
SKA3-204ENST00000462482 ZNF630Q2M218 657 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms