RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 SLC10A2Q12908 348 aaPredicted RBP4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 DNAJC3Q13217 504 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 ZNF177Q13360 481 aaPredicted RBP4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 CDH18Q13634 790 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 DPYSL3Q14195 570 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 PIGHQ14442 188 aaPredicted RBP4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 NFE2L1Q14494 772 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 KRT81Q14533 505 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 PTPRRQ15256 657 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 CYP2A13Q16696 494 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 GALNTL6Q49A17 601 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 ZNF569Q5MCW4 686 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 B3GNTL1Q67FW5 361 aaPredicted RBP4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 EMBQ6PCB8 327 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 NT5DC3Q86UY8 548 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 MAP7D3Q8IWC1 876 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 ARHGAP12Q8IWW6 846 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 IZUMO1Q8IYV9 350 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 DEFB119Q8N690 84 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 TRIML2Q8N7C3 387 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 NIPA2Q8N8Q9 360 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 CCDC89Q8N998 374 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 TERB1Q8NA31 727 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 IL17RCQ8NAC3 791 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 FIBINQ8TAL6 211 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 AGAP11Q8TF27 550 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 UCMAQ8WVF2 138 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 ZFPM2Q8WW38 1151 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 RLN3Q8WXF3 142 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 ST8SIA4Q92187 359 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 TMEM125Q96AQ2 219 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 FAM136AQ96C01 138 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 OTUB2Q96DC9 234 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 ZNF419Q96HQ0 510 aaPredicted RBP4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 CSPG4P5Q96PW8 444 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 RAB3IPQ96QF0 476 aaPredicted RBP4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 SMIM14Q96QK8 99 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 SIKE1Q9BRV8 207 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 FEM1AQ9BSK4 669 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 MECRQ9BV79 373 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 TRIM62Q9BVG3 475 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 SPATA16Q9BXB7 569 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 TPSD1Q9BZJ3 242 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 FAM129AQ9BZQ8 928 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 ZYG11BQ9C0D3 744 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 PAIP1Q9H074 479 aaKnown RBP4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 C8orf33Q9H7E9 229 aaPredicted RBP4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 LIN7CQ9NUP9 197 aaKnown RBP4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 ARMC1Q9NVT9 282 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 RHBDL2Q9NX52 303 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 ELOVL2Q9NXB9 296 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 PTTG2Q9NZH5 202 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 UVRAGQ9P2Y5 699 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 SLC12A6Q9UHW9 1150 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 RIMKLBQ9ULI2 386 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 DNAJC16Q9Y2G8 782 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 ZNF711Q9Y462 761 aa4.71□□□□□ -1.66
ATPAF1-203ENST00000460928 IGSF10Q6WRI0 2623 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 ARPC4-TTLL3A0A0A6YYG9 625 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 A0A1B0GVM2 712 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 A0A1W2PQF6 199 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 FAM90A20PA6NIJ5 464 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 CENPBD1B2RD01 187 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 HNRNPCL2B2RXH8 293 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 TMEM114B3SHH9 223 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 STX16-NPEPL1H3BU86 382 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 DFFAO00273 331 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 STX16O14662 325 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 PPM1DO15297 605 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 YKT6O15498 198 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 INSIG1O15503 277 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 HNRNPCL1O60812 293 aaKnown RBP4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 ZNF821O75541 412 aaPredicted RBP4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 SERPINB7O75635 380 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 LATS1O95835 1130 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 CD160O95971 181 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 PRKCGP05129 697 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 SRCP12931 536 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 IL32P24001 234 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 NFKBIAP25963 317 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 OR1E1P30953 314 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 PCK1P35558 622 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 MDH1P40925 334 aaKnown RBP4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 CETN2P41208 172 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 GSTM5P46439 218 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 RGRP47804 291 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 KRT6CP48668 564 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 CASP6P55212 293 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 ADARP55265 1226 aaKnown RBP4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 CDH4P55283 916 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 RPL26P61254 145 aaKnown RBP4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 GNG11P61952 73 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 CXADRP78310 365 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 OLR1P78380 273 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 KRT83P78385 493 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 ARF5P84085 180 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 GNA12Q03113 381 aa4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 CSTF1Q05048 431 aaKnown RBP4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 GRSF1Q12849 480 aaKnown RBP eCLIP4.7□□□□□ -1.66
ATPAF1-203ENST00000460928 SF3A3Q12874 501 aaKnown RBP eCLIP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms