RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 PNPOQ9NVS9 261 aa8.65□□□□□ -1.02
SHROOM4-203ENST00000460112 DUSP11O75319 330 aaKnown RBP8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 TRAPPC6AO75865 159 aa8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 MT-CYBP00156 380 aaPredicted RBP8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 IFNA5P01569 189 aa8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 SLC6A6P31641 620 aa8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 NRG1Q02297 640 aaPredicted RBP8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 MZT1Q08AG7 82 aa8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 AMZ1Q400G9 498 aa8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 KIAA0930Q6ICG6 404 aaPredicted RBP8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 CBR4Q8N4T8 237 aa8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 GRHL3Q8TE85 626 aa8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 ABHD5Q8WTS1 349 aa8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 SMARCD2Q92925 531 aa8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 CD180Q99467 661 aa8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 RANBP3Q9H6Z4 567 aaPredicted RBP8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 UNKLQ9H9P5 680 aaKnown RBP8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 SIRPGQ9P1W8 387 aa8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 KCNN3Q9UGI6 736 aa8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 SCAMP3O14828 347 aaKnown RBP8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 ACOX3O15254 700 aa8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 CYB5BO43169 146 aa8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 SEPT4O43236 478 aa8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 H1F0P07305 194 aaKnown RBP8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 ADH5P11766 374 aa8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 HSPA7P48741 367 aa8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 RPL6Q02878 288 aaKnown RBP8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 WSCD2Q2TBF2 565 aa8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 PRAMEF14Q5SWL7 426 aa8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 PRAMEF13Q5VWM6 474 aa8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 ADGRA1Q86SQ6 560 aa8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 IQCHQ86VS3 1027 aa8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 RBM15BQ8NDT2 890 aaKnown RBP8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 OR5J2Q8NH18 312 aa8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 SEC14L1Q92503 715 aa8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 OR2AG1Q9H205 316 aa8.65□□□□□ -1.03
SHROOM4-203ENST00000460112 CLDN5O00501 218 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 POLR2HP52434 150 aaKnown RBP8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 OR2B6P58173 313 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 TCEAL1Q15170 157 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 KCTD19Q17RG1 926 aaPredicted RBP8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 PLD6Q8N2A8 252 aaKnown RBP8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 MRI1Q9BV20 369 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 GTPBP2Q9BX10 602 aaKnown RBP8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 PRODH2Q9UF12 536 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 CNTN6Q9UQ52 1028 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 GJE1A6NN92 205 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 IL3P08700 152 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 HOXA10P31260 410 aaPredicted RBP8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 RPP30P78346 268 aaKnown RBP8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 FGL1Q08830 312 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 NPTX1Q15818 432 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 SLC36A3Q495N2 470 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 TMEM53Q6P2H8 277 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 SLC36A4Q6YBV0 504 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 PARP8Q8N3A8 854 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 CIB1Q99828 191 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 PELOQ9BRX2 385 aaKnown RBP8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 TOR3AQ9H497 397 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 EVLQ9UI08 416 aaPredicted RBP8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 HSPE1-MOB4S4R3N1 261 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 DDX60Q8IY21 1712 aaKnown RBP8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 ZSCAN5BA6NJL1 495 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 RORAP35398 523 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 RAB5BP61020 215 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 FSTL1Q12841 308 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 LRRC66Q68CR7 880 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 C6orf120Q7Z4R8 191 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 C12orf43Q96C57 262 aaKnown RBP8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 SNX27Q96L92 541 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 OR2B2Q9GZK3 357 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 MMP27Q9H306 513 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 ZFP57Q9NU63 452 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 PRR5-ARHGAP8B1AHC4 643 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 H7C417 338 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 AHSA1O95433 338 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 NCK1P16333 377 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 PFKLP17858 780 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 DHPSP49366 369 aaPredicted RBP8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 ACTC1P68032 377 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 ACTA1P68133 377 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 ARHGAP8P85298 464 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 GALK2Q01415 458 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 ST3GAL3Q11203 375 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 MOGQ16653 247 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 LAS2Q8IYD9 372 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 SIDT2Q8NBJ9 832 aaKnown RBP8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 HNRNPABQ99729 332 aaKnown RBP8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 GMEB2Q9UKD1 530 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 SLC38A8A6NNN8 435 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 FBP2O00757 339 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 CYP11A1P05108 521 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 ZNF267Q14586 743 aaPredicted RBP8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 BCL2A1Q16548 175 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 GTF2IRD2BQ6EKJ0 949 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 GTF2IRD2Q86UP8 949 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 SHKBP1Q8TBC3 707 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 ADAMTS18Q8TE60 1221 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 POF1BQ8WVV4 589 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms