RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 CDC16Q13042 620 aa19.7■□□□□ 0.74
VARS-218ENST00000459667 LACTB2Q53H82 288 aaPredicted RBP19.7■□□□□ 0.74
VARS-218ENST00000459667 FBXO48Q5FWF7 155 aa19.7■□□□□ 0.74
VARS-218ENST00000459667 TMEM214Q6NUQ4 689 aaKnown RBP19.7■□□□□ 0.74
VARS-218ENST00000459667 PRSS58Q8IYP2 241 aa19.7■□□□□ 0.74
VARS-218ENST00000459667 AMER3Q8N944 861 aa19.7■□□□□ 0.74
VARS-218ENST00000459667 KCT2Q8NC54 265 aa19.7■□□□□ 0.74
VARS-218ENST00000459667 ATOH8Q96SQ7 321 aa19.7■□□□□ 0.74
VARS-218ENST00000459667 DNAJC11Q9NVH1 559 aa19.7■□□□□ 0.74
VARS-218ENST00000459667 P4HTMQ9NXG6 502 aa19.7■□□□□ 0.74
VARS-218ENST00000459667 NUDT4Q9NZJ9 180 aa19.7■□□□□ 0.74
VARS-218ENST00000459667 TP53TG5Q9Y2B4 290 aa19.7■□□□□ 0.74
VARS-218ENST00000459667 MED13Q9UHV7 2174 aa19.69■□□□□ 0.74
VARS-218ENST00000459667 IGLV3-12A0A075B6K2 115 aa19.69■□□□□ 0.74
VARS-218ENST00000459667 SUPT3HB4E1H0 165 aa19.69■□□□□ 0.74
VARS-218ENST00000459667 B8ZZF3 427 aa19.69■□□□□ 0.74
VARS-218ENST00000459667 SUPT3HO75486 399 aa19.69■□□□□ 0.74
VARS-218ENST00000459667 STK16O75716 305 aa19.69■□□□□ 0.74
VARS-218ENST00000459667 NSA2O95478 260 aaKnown RBP19.69■□□□□ 0.74
VARS-218ENST00000459667 ZGLP1P0C6A0 271 aa19.69■□□□□ 0.74
VARS-218ENST00000459667 IL1RNP18510 177 aa19.69■□□□□ 0.74
VARS-218ENST00000459667 VARSP26640 1264 aaKnown RBP19.69■□□□□ 0.74
VARS-218ENST00000459667 SCTRP47872 440 aa19.69■□□□□ 0.74
VARS-218ENST00000459667 KLC1Q07866 573 aa19.69■□□□□ 0.74
VARS-218ENST00000459667 FAM83EQ2M2I3 478 aa19.69■□□□□ 0.74
VARS-218ENST00000459667 VWA2Q5GFL6 755 aa19.69■□□□□ 0.74
VARS-218ENST00000459667 TCTN3Q6NUS6 607 aa19.69■□□□□ 0.74
VARS-218ENST00000459667 OR9A4Q8NGU2 314 aa19.69■□□□□ 0.74
VARS-218ENST00000459667 ESAMQ96AP7 390 aa19.69■□□□□ 0.74
VARS-218ENST00000459667 NACC2Q96BF6 587 aa19.69■□□□□ 0.74
VARS-218ENST00000459667 FER1L6-AS2Q96M78 137 aa19.69■□□□□ 0.74
VARS-218ENST00000459667 CRB3Q9BUF7 120 aa19.69■□□□□ 0.74
VARS-218ENST00000459667 SEMA3GQ9NS98 782 aa19.69■□□□□ 0.74
VARS-218ENST00000459667 C14orf105Q9NVL8 296 aa19.69■□□□□ 0.74
VARS-218ENST00000459667 GPRC5BQ9NZH0 403 aa19.69■□□□□ 0.74
VARS-218ENST00000459667 ZFP69BQ9UJL9 534 aa19.69■□□□□ 0.74
VARS-218ENST00000459667 PTBP2Q9UKA9 531 aaKnown RBP19.69■□□□□ 0.74
VARS-218ENST00000459667 MAP4K5Q9Y4K4 846 aa19.69■□□□□ 0.74
VARS-218ENST00000459667 HEMK1Q9Y5R4 338 aaPredicted RBP19.69■□□□□ 0.74
VARS-218ENST00000459667 NUP210LQ5VU65 1888 aa19.69■□□□□ 0.74
VARS-218ENST00000459667 EXOC1LA0A1B0GW35 172 aa19.68■□□□□ 0.74
VARS-218ENST00000459667 H0YIG0 161 aa19.68■□□□□ 0.74
VARS-218ENST00000459667 RIPK2O43353 540 aa19.68■□□□□ 0.74
VARS-218ENST00000459667 KRT38O76015 456 aa19.68■□□□□ 0.74
VARS-218ENST00000459667 IGHEP01854 428 aa19.68■□□□□ 0.74
VARS-218ENST00000459667 SERPIND1P05546 499 aa19.68■□□□□ 0.74
VARS-218ENST00000459667 FAM153BP0C7A2 387 aa19.68■□□□□ 0.74
VARS-218ENST00000459667 CNTFP26441 200 aa19.68■□□□□ 0.74
VARS-218ENST00000459667 AHRP35869 848 aa19.68■□□□□ 0.74
VARS-218ENST00000459667 GLRBP48167 497 aa19.68■□□□□ 0.74
VARS-218ENST00000459667 MAT1AQ00266 395 aaKnown RBP19.68■□□□□ 0.74
VARS-218ENST00000459667 PWP1Q13610 501 aa19.68■□□□□ 0.74
VARS-218ENST00000459667 RBBP5Q15291 538 aaKnown RBP19.68■□□□□ 0.74
VARS-218ENST00000459667 RBBP7Q16576 425 aa19.68■□□□□ 0.74
VARS-218ENST00000459667 SYT16Q17RD7 645 aa19.68■□□□□ 0.74
VARS-218ENST00000459667 FAM153CQ494X1 144 aa19.68■□□□□ 0.74
VARS-218ENST00000459667 SLCO4C1Q6ZQN7 724 aa19.68■□□□□ 0.74
VARS-218ENST00000459667 PRSS41Q7RTY9 318 aa19.68■□□□□ 0.74
VARS-218ENST00000459667 GSPT2Q8IYD1 628 aaKnown RBP19.68■□□□□ 0.74
VARS-218ENST00000459667 SNX31Q8N9S9 440 aa19.68■□□□□ 0.74
VARS-218ENST00000459667 DCAKDQ8WVC6 231 aa19.68■□□□□ 0.74
VARS-218ENST00000459667 MOCOSQ96EN8 888 aa19.68■□□□□ 0.74
VARS-218ENST00000459667 SLC25A23Q9BV35 468 aa19.68■□□□□ 0.74
VARS-218ENST00000459667 CAPS2Q9BXY5 557 aa19.68■□□□□ 0.74
VARS-218ENST00000459667 VPS11Q9H270 941 aa19.68■□□□□ 0.74
VARS-218ENST00000459667 ANKHQ9HCJ1 492 aa19.68■□□□□ 0.74
VARS-218ENST00000459667 MKKSQ9NPJ1 570 aaPredicted RBP19.68■□□□□ 0.74
VARS-218ENST00000459667 ZNF180Q9UJW8 692 aa19.68■□□□□ 0.74
VARS-218ENST00000459667 TLN1Q9Y490 2541 aaKnown RBP19.68■□□□□ 0.74
VARS-218ENST00000459667 AGPSO00116 658 aa19.67■□□□□ 0.74
VARS-218ENST00000459667 UBXN8O00124 270 aa19.67■□□□□ 0.74
VARS-218ENST00000459667 CLGNO14967 610 aa19.67■□□□□ 0.74
VARS-218ENST00000459667 CCNT2O60583 730 aaKnown RBP19.67■□□□□ 0.74
VARS-218ENST00000459667 KLHL2O95198 593 aa19.67■□□□□ 0.74
VARS-218ENST00000459667 C1GALT1C1LP0DN25 315 aa19.67■□□□□ 0.74
VARS-218ENST00000459667 NR1D1P20393 614 aa19.67■□□□□ 0.74
VARS-218ENST00000459667 RGS1Q08116 209 aa19.67■□□□□ 0.74
VARS-218ENST00000459667 PDK4Q16654 411 aa19.67■□□□□ 0.74
VARS-218ENST00000459667 DCAF10Q5QP82 559 aa19.67■□□□□ 0.74
VARS-218ENST00000459667 LGSNQ5TDP6 509 aa19.67■□□□□ 0.74
VARS-218ENST00000459667 ATG9BQ674R7 924 aa19.67■□□□□ 0.74
VARS-218ENST00000459667 KLC3Q6P597 504 aa19.67■□□□□ 0.74
VARS-218ENST00000459667 ZNF605Q86T29 641 aa19.67■□□□□ 0.74
VARS-218ENST00000459667 PTRH1Q86Y79 214 aaKnown RBP19.67■□□□□ 0.74
VARS-218ENST00000459667 CNPY4Q8N129 248 aa19.67■□□□□ 0.74
VARS-218ENST00000459667 ANKRD53Q8N9V6 530 aa19.67■□□□□ 0.74
VARS-218ENST00000459667 RHEBL1Q8TAI7 183 aa19.67■□□□□ 0.74
VARS-218ENST00000459667 NT5CQ8TCD5 201 aa19.67■□□□□ 0.74
VARS-218ENST00000459667 ISL2Q96A47 359 aa19.67■□□□□ 0.74
VARS-218ENST00000459667 C3orf18Q9UK00 162 aa19.67■□□□□ 0.74
VARS-218ENST00000459667 PCDHGA9Q9Y5G4 932 aaKnown RBP19.67■□□□□ 0.74
VARS-218ENST00000459667 HS3ST3B1Q9Y662 390 aa19.67■□□□□ 0.74
VARS-218ENST00000459667 SLC22A7Q9Y694 548 aa19.67■□□□□ 0.74
VARS-218ENST00000459667 CCDC189A1A4V9 331 aa19.66■□□□□ 0.74
VARS-218ENST00000459667 SYCE1LA8MT33 242 aa19.66■□□□□ 0.74
VARS-218ENST00000459667 K7EM74 188 aa19.66■□□□□ 0.74
VARS-218ENST00000459667 SOCS6O14544 535 aa19.66■□□□□ 0.74
VARS-218ENST00000459667 H2AFYO75367 372 aaKnown RBP19.66■□□□□ 0.74
VARS-218ENST00000459667 CEACAM4O75871 244 aa19.66■□□□□ 0.74
VARS-218ENST00000459667 CXCR2P25025 360 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms