RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 ACOT9Q9Y305 439 aa17.75■□□□□ 0.43
USP39-209ENST00000458268 SMG1Q96Q15 3661 aaKnown RBP17.75■□□□□ 0.43
USP39-209ENST00000458268 TRBC2A0A5B9 178 aa17.74■□□□□ 0.43
USP39-209ENST00000458268 UBXN8O00124 270 aa17.74■□□□□ 0.43
USP39-209ENST00000458268 RDH16O75452 317 aa17.74■□□□□ 0.43
USP39-209ENST00000458268 PDGFAP04085 211 aa17.74■□□□□ 0.43
USP39-209ENST00000458268 HEXBP07686 556 aa17.74■□□□□ 0.43
USP39-209ENST00000458268 MSH2P43246 934 aa17.74■□□□□ 0.43
USP39-209ENST00000458268 SERPINB8P50452 374 aa17.74■□□□□ 0.43
USP39-209ENST00000458268 RELAQ04206 551 aa17.74■□□□□ 0.43
USP39-209ENST00000458268 EEF1A2Q05639 463 aaKnown RBP17.74■□□□□ 0.43
USP39-209ENST00000458268 CDC16Q13042 620 aa17.74■□□□□ 0.43
USP39-209ENST00000458268 NXPE4Q6UWF7 544 aa17.74■□□□□ 0.43
USP39-209ENST00000458268 TAOK1Q7L7X3 1001 aa17.74■□□□□ 0.43
USP39-209ENST00000458268 AMER3Q8N944 861 aa17.74■□□□□ 0.43
USP39-209ENST00000458268 ABHD11Q8NFV4 315 aa17.74■□□□□ 0.43
USP39-209ENST00000458268 KIAA1191Q96A73 305 aa17.74■□□□□ 0.43
USP39-209ENST00000458268 C8orf44Q96CB5 159 aa17.74■□□□□ 0.43
USP39-209ENST00000458268 FER1L6-AS2Q96M78 137 aa17.74■□□□□ 0.43
USP39-209ENST00000458268 PAFAH2Q99487 392 aa17.74■□□□□ 0.43
USP39-209ENST00000458268 MESP1Q9BRJ9 268 aa17.74■□□□□ 0.43
USP39-209ENST00000458268 SLC26A1Q9H2B4 701 aa17.74■□□□□ 0.43
USP39-209ENST00000458268 CNOT10Q9H9A5 744 aaKnown RBP17.74■□□□□ 0.43
USP39-209ENST00000458268 DNAJC11Q9NVH1 559 aa17.74■□□□□ 0.43
USP39-209ENST00000458268 KALRNO60229 2985 aa17.73■□□□□ 0.43
USP39-209ENST00000458268 KCNE1BA0A087WTH5 132 aa17.73■□□□□ 0.43
USP39-209ENST00000458268 A0A087WUV0 522 aaPredicted RBP17.73■□□□□ 0.43
USP39-209ENST00000458268 A0A087X1B8 175 aa17.73■□□□□ 0.43
USP39-209ENST00000458268 A0A096LPK6 155 aa17.73■□□□□ 0.43
USP39-209ENST00000458268 TAPBPO15533 448 aa17.73■□□□□ 0.43
USP39-209ENST00000458268 H2AFYO75367 372 aaKnown RBP17.73■□□□□ 0.43
USP39-209ENST00000458268 B3GALT4O96024 378 aa17.73■□□□□ 0.43
USP39-209ENST00000458268 C2P06681 752 aa17.73■□□□□ 0.43
USP39-209ENST00000458268 PLA2G2AP14555 144 aa17.73■□□□□ 0.43
USP39-209ENST00000458268 MMP11P24347 488 aa17.73■□□□□ 0.43
USP39-209ENST00000458268 ITGA3P26006 1051 aa17.73■□□□□ 0.43
USP39-209ENST00000458268 EMP3P54852 163 aa17.73■□□□□ 0.43
USP39-209ENST00000458268 REEP5Q00765 189 aa17.73■□□□□ 0.43
USP39-209ENST00000458268 RGS1Q08116 209 aa17.73■□□□□ 0.43
USP39-209ENST00000458268 SLBPQ14493 270 aaKnown RBP eCLIP17.73■□□□□ 0.43
USP39-209ENST00000458268 TUBB8Q3ZCM7 444 aa17.73■□□□□ 0.43
USP39-209ENST00000458268 MINDY4Q4G0A6 757 aa17.73■□□□□ 0.43
USP39-209ENST00000458268 DCAF10Q5QP82 559 aa17.73■□□□□ 0.43
USP39-209ENST00000458268 SULT1C3Q6IMI6 304 aa17.73■□□□□ 0.43
USP39-209ENST00000458268 TCTN3Q6NUS6 607 aa17.73■□□□□ 0.43
USP39-209ENST00000458268 LAPTM4BQ86VI4 370 aa17.73■□□□□ 0.43
USP39-209ENST00000458268 PARP9Q8IXQ6 854 aa17.73■□□□□ 0.43
USP39-209ENST00000458268 TCAIMQ8N3R3 496 aa17.73■□□□□ 0.43
USP39-209ENST00000458268 TEX19Q8NA77 164 aa17.73■□□□□ 0.43
USP39-209ENST00000458268 FDCSPQ8NFU4 85 aa17.73■□□□□ 0.43
USP39-209ENST00000458268 STAG3L4Q8TBR4 150 aa17.73■□□□□ 0.43
USP39-209ENST00000458268 MVB12AQ96EY5 273 aa17.73■□□□□ 0.43
USP39-209ENST00000458268 UBXN10Q96LJ8 280 aa17.73■□□□□ 0.43
USP39-209ENST00000458268 IGSF5Q9NSI5 407 aa17.73■□□□□ 0.43
USP39-209ENST00000458268 GPR83Q9NYM4 423 aa17.73■□□□□ 0.43
USP39-209ENST00000458268 NAALAD2Q9Y3Q0 740 aa17.73■□□□□ 0.43
USP39-209ENST00000458268 MAP4K5Q9Y4K4 846 aa17.73■□□□□ 0.43
USP39-209ENST00000458268 HS3ST3B1Q9Y662 390 aa17.73■□□□□ 0.43
USP39-209ENST00000458268 TLN1Q9Y490 2541 aaKnown RBP17.73■□□□□ 0.43
USP39-209ENST00000458268 SPTA1P02549 2419 aa17.72■□□□□ 0.43
USP39-209ENST00000458268 EXOC1LA0A1B0GW35 172 aa17.72■□□□□ 0.43
USP39-209ENST00000458268 IDSB3KWA1 339 aa17.72■□□□□ 0.43
USP39-209ENST00000458268 AGPSO00116 658 aa17.72■□□□□ 0.43
USP39-209ENST00000458268 MAP2K7O14733 419 aa17.72■□□□□ 0.43
USP39-209ENST00000458268 JRKO75564 520 aa17.72■□□□□ 0.43
USP39-209ENST00000458268 STK16O75716 305 aa17.72■□□□□ 0.43
USP39-209ENST00000458268 KLHL18O94889 574 aa17.72■□□□□ 0.43
USP39-209ENST00000458268 UQCRHP07919 91 aa17.72■□□□□ 0.43
USP39-209ENST00000458268 ZNF888P0CJ79 500 aaPredicted RBP17.72■□□□□ 0.43
USP39-209ENST00000458268 GNAZP19086 355 aa17.72■□□□□ 0.43
USP39-209ENST00000458268 CXCR2P25025 360 aa17.72■□□□□ 0.43
USP39-209ENST00000458268 SLC6A12P48065 614 aa17.72■□□□□ 0.43
USP39-209ENST00000458268 EMP2P54851 167 aa17.72■□□□□ 0.43
USP39-209ENST00000458268 OLR1P78380 273 aa17.72■□□□□ 0.43
USP39-209ENST00000458268 FAM83EQ2M2I3 478 aa17.72■□□□□ 0.43
USP39-209ENST00000458268 TMEM214Q6NUQ4 689 aaKnown RBP17.72■□□□□ 0.43
USP39-209ENST00000458268 SCYL1Q96KG9 808 aa17.72■□□□□ 0.43
USP39-209ENST00000458268 NUDT9Q9BW91 350 aa17.72■□□□□ 0.43
USP39-209ENST00000458268 MFRPQ9BY79 579 aa17.72■□□□□ 0.43
USP39-209ENST00000458268 MKKSQ9NPJ1 570 aaPredicted RBP17.72■□□□□ 0.43
USP39-209ENST00000458268 ENAMQ9NRM1 1142 aa17.72■□□□□ 0.43
USP39-209ENST00000458268 SEMA3GQ9NS98 782 aa17.72■□□□□ 0.43
USP39-209ENST00000458268 NUDT4Q9NZJ9 180 aa17.72■□□□□ 0.43
USP39-209ENST00000458268 CPSF2Q9P2I0 782 aaKnown RBP17.72■□□□□ 0.43
USP39-209ENST00000458268 MKL2Q9ULH7 1088 aa17.72■□□□□ 0.43
USP39-209ENST00000458268 HMX2A2RU54 273 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 VSTM2BA6NLU5 285 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 SOCS6O14544 535 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 NSA2O95478 260 aaKnown RBP17.71■□□□□ 0.43
USP39-209ENST00000458268 ONECUT2O95948 504 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 IGHEP01854 428 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 FAM153BP0C7A2 387 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 C1GALT1C1LP0DN25 315 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 GFAPP14136 432 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 ACPPP15309 386 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 SLC26A3P40879 764 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 XCR1P46094 333 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 SCTRP47872 440 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 KCNC1P48547 511 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 AGTR2P50052 363 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms