RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 CCDC177Q9NQR7 707 aaPredicted RBP3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 STARD7Q9NQZ5 370 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 RASSF1Q9NS23 344 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 THSD1Q9NS62 852 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 GKN1Q9NS71 199 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 DDX28Q9NUL7 540 aaKnown RBP3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 ABCB8Q9NUT2 735 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 MARCH5Q9NX47 278 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 VNN3Q9NY84 501 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 EHD3Q9NZN3 535 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 CNOT2Q9NZN8 540 aaKnown RBP3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 GULP1Q9UBP9 304 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 PSORS1C1Q9UIG5 152 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 ZNF221Q9UK13 617 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 PNMA8BQ9ULN7 279 aaPredicted RBP3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 FZD4Q9ULV1 537 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 PPT2Q9UMR5 302 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 ABCG2Q9UNQ0 655 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 BTBD3Q9Y2F9 522 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 DLGAP4Q9Y2H0 992 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 WBP11Q9Y2W2 641 aaKnown RBP3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 GRIP1Q9Y3R0 1128 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 TESMINQ9Y4I5 508 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 NEUROG3Q9Y4Z2 214 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 LYVE1Q9Y5Y7 322 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 PRSS21Q9Y6M0 314 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 VWA8A3KMH1 1905 aa3.22□□□□□ -1.89
HMGN1P18-201ENST00000457642 CASP8AP2Q9UKL3 1982 aa3.21□□□□□ -1.89
HMGN1P18-201ENST00000457642 TTC3P53804 2025 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 IGLV3-16A0A075B6K0 115 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 A0A075B6Q4 140 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 TRAV19A0A0A6YYK7 116 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 FAM172BPA6NC97 362 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 C2orf78A6NCI8 922 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 NPIPB15A6NHN6 443 aaPredicted RBP3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 AGAP14A8MT82 685 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 FADS2P1A8MWK0 482 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 FAM25AB3EWG3 89 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 FAM25CB3EWG5 89 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 FAM25GB3EWG6 89 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 H0YIV9 168 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 CACNB4O00305 520 aaPredicted RBP3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 CCRL2O00421 344 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 FAAHO00519 579 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 GAPDHSO14556 408 aaPredicted RBP3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 MYL12BO14950 172 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 GPR39O43194 453 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 ZW10O43264 779 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 TBX1O43435 398 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 BNIP3LO60238 219 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 NBNO60934 754 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 ADAM23O75077 832 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 ATG13O75143 517 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 WBP4O75554 376 aaKnown RBP3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 CCNKO75909 580 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 SLITRK5O94991 958 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 DIRAS1O95057 198 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 GADD45GO95257 159 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 VNN2O95498 520 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 POP4O95707 220 aaKnown RBP3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 OXSR1O95747 527 aaPredicted RBP3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 CD160O95971 181 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 ADAP00813 363 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 KLKB1P03952 638 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 URODP06132 367 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 LCKP06239 509 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 CKMP06732 381 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 ABCB1P08183 1280 aaPredicted RBP3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 SLC10A3P09131 477 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 HSMCR30P0CW71 290 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 TRAPPC2P0DI81 140 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 TRAPPC2BP0DI82 140 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 ADORA3P0DMS8 318 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 LAMP1P11279 417 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 PIPP12273 146 aaPredicted RBP3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 HMGA1P17096 107 aaKnown RBP3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 HOXB9P17482 250 aaPredicted RBP3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 RHCEP18577 417 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 TACR1P25103 407 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 PTPN6P29350 595 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 HOXA9P31269 272 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 VIPR1P32241 457 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 CCR7P32248 378 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 TGFBR2P37173 567 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 NNMTP40261 264 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 ETV6P41212 452 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 CASP3P42574 277 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 SLC15A1P46059 708 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 GJA8P48165 433 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 MASP1P48740 699 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 PXNP49023 591 aaPredicted RBP3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 SPINT3P49223 89 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 FLT3LGP49771 235 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 ANXA11P50995 505 aaKnown RBP3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 RORCP51449 518 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 SGSHP51688 502 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 UGT2B15P54855 530 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 MLLT10P55197 1068 aa3.21□□□□□ -1.9
HMGN1P18-201ENST00000457642 OR2B6P58173 313 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms