RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 OR52A5Q9H2C5 316 aa16.05■□□□□ 0.16
CCDC43-202ENST00000457422 TIMMDC1Q9NPL8 285 aa16.05■□□□□ 0.16
CCDC43-202ENST00000457422 CCDC177Q9NQR7 707 aaPredicted RBP16.05■□□□□ 0.16
CCDC43-202ENST00000457422 VNN3Q9NY84 501 aa16.05■□□□□ 0.16
CCDC43-202ENST00000457422 ZNF282Q9UDV7 671 aaPredicted RBP16.05■□□□□ 0.16
CCDC43-202ENST00000457422 EXO1Q9UQ84 846 aaKnown RBP16.05■□□□□ 0.16
CCDC43-202ENST00000457422 PCYT1BQ9Y5K3 369 aaPredicted RBP16.05■□□□□ 0.16
CCDC43-202ENST00000457422 GNG14A0A1W2PPG7 69 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 SLC16A6O15403 523 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 EN2P19622 333 aaPredicted RBP16.04■□□□□ 0.16
CCDC43-202ENST00000457422 IL12RB1P42701 662 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 RAD23AP54725 363 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 PMS2P3Q13401 168 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 OR2T5Q6IEZ7 315 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 NXPE4Q6UWF7 544 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 ADAMTSL4Q6UY14 1074 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 FAM83HQ6ZRV2 1179 aaPredicted RBP16.04■□□□□ 0.16
CCDC43-202ENST00000457422 KCTD8Q6ZWB6 473 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 GALNT10Q86SR1 603 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 DCP2Q8IU60 420 aaKnown RBP16.04■□□□□ 0.16
CCDC43-202ENST00000457422 CLVS1Q8IUQ0 354 aaPredicted RBP16.04■□□□□ 0.16
CCDC43-202ENST00000457422 PLA2G15Q8NCC3 412 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 OR2T29Q8NH02 315 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 GOT1L1Q8NHS2 421 aaPredicted RBP16.04■□□□□ 0.16
CCDC43-202ENST00000457422 CNDP2Q96KP4 475 aaKnown RBP16.04■□□□□ 0.16
CCDC43-202ENST00000457422 DOK1Q99704 481 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 DPH2Q9BQC3 489 aaPredicted RBP16.04■□□□□ 0.16
CCDC43-202ENST00000457422 SFXN1Q9H9B4 322 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 POLR1BQ9H9Y6 1135 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 PCDHGA8Q9Y5G5 932 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 PI15O43692 258 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 HS6ST1O60243 411 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 ITGAMP11215 1152 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 JUNBP17275 347 aaPredicted RBP16.04■□□□□ 0.16
CCDC43-202ENST00000457422 CRHBPP24387 322 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 P2RY2P41231 377 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 PIK3CBP42338 1070 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 RPA4Q13156 261 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 IL18R1Q13478 541 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 RAB39AQ14964 217 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 ARMCX6Q7L4S7 300 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 PIWIL3Q7Z3Z3 882 aaKnown RBP16.04■□□□□ 0.16
CCDC43-202ENST00000457422 COMMD6Q7Z4G1 85 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 SUSD6Q92537 303 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 SPNS1Q9H2V7 528 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 REEP4Q9H6H4 257 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 CXorf21Q9HAI6 301 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 LTB4R2Q9NPC1 389 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 FZD4Q9ULV1 537 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 VPS4AQ9UN37 437 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 ABCG2Q9UNQ0 655 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 TMEM98Q9Y2Y6 226 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 PRKAB1Q9Y478 270 aa16.04■□□□□ 0.16
CCDC43-202ENST00000457422 LOC100130705A0A1B0GUX0 176 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 TBC1D3BA6NDS4 549 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 FABP3P05413 133 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 FCARP24071 287 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 DCKP27707 260 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 RPL3P39023 403 aaKnown RBP16.03■□□□□ 0.16
CCDC43-202ENST00000457422 GABARAPL2P60520 117 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 CNTN1Q12860 1018 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 GAB1Q13480 694 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 PDE7AQ13946 482 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 DUSP6Q16828 381 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 ZNF691Q5VV52 312 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 BROXQ5VW32 411 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 LCTLQ6UWM7 567 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 TMEM26Q6ZUK4 368 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 PDZD3Q86UT5 571 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 CHDHQ8NE62 594 aaPredicted RBP16.03■□□□□ 0.16
CCDC43-202ENST00000457422 SNX19Q92543 992 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 UBE2E3Q969T4 207 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 CERS4Q9HA82 394 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 GDE1Q9NZC3 331 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 THAP10Q9P2Z0 257 aaPredicted RBP16.03■□□□□ 0.16
CCDC43-202ENST00000457422 ORC6Q9Y5N6 252 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 U3KQV3 271 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 DPM1O60762 260 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 PRKACGP22612 351 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 OPRD1P41143 372 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 CTBSQ01459 385 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 MEF2AQ02078 507 aaPredicted RBP16.03■□□□□ 0.16
CCDC43-202ENST00000457422 C16orf72Q14CZ0 275 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 RGNQ15493 299 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 ZNF385BQ569K4 471 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 PIP5KL1Q5T9C9 394 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 R3HCC1LQ7Z5L2 792 aaKnown RBP16.03■□□□□ 0.16
CCDC43-202ENST00000457422 METTL4Q8N3J2 472 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 RAD51AP1Q96B01 352 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 NRBF2Q96F24 287 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 HSH2DQ96JZ2 352 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 IL17FQ96PD4 163 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 MYNNQ9NPC7 610 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 PRSS16Q9NQE7 514 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 ATAD3AQ9NVI7 634 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 HCN2Q9UL51 889 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 PLAGL1Q9UM63 463 aa16.03■□□□□ 0.16
CCDC43-202ENST00000457422 ABCB7O75027 752 aa16.02■□□□□ 0.15
CCDC43-202ENST00000457422 EPHX1P07099 455 aa16.02■□□□□ 0.15
CCDC43-202ENST00000457422 ERGP11308 486 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms