RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 P2RY8Q86VZ1 359 aa11.99□□□□□ -0.49
LINC00959-201ENST00000456581 CACUL1Q86Y37 369 aa11.99□□□□□ -0.49
LINC00959-201ENST00000456581 SVOPLQ8N434 492 aa11.99□□□□□ -0.49
LINC00959-201ENST00000456581 PROX1Q92786 737 aa11.99□□□□□ -0.49
LINC00959-201ENST00000456581 ZNF641Q96N77 438 aaPredicted RBP11.99□□□□□ -0.49
LINC00959-201ENST00000456581 TMEM184CQ9NVA4 438 aa11.99□□□□□ -0.49
LINC00959-201ENST00000456581 OARD1Q9Y530 152 aa11.99□□□□□ -0.49
LINC00959-201ENST00000456581 KPNA3O00505 521 aaPredicted RBP11.99□□□□□ -0.49
LINC00959-201ENST00000456581 TBX1O43435 398 aa11.99□□□□□ -0.49
LINC00959-201ENST00000456581 FAM20BO75063 409 aa11.99□□□□□ -0.49
LINC00959-201ENST00000456581 SCELO95171 688 aa11.99□□□□□ -0.49
LINC00959-201ENST00000456581 FKBP9O95302 570 aa11.99□□□□□ -0.49
LINC00959-201ENST00000456581 S100A3P33764 101 aa11.99□□□□□ -0.49
LINC00959-201ENST00000456581 DGKGP49619 791 aa11.99□□□□□ -0.49
LINC00959-201ENST00000456581 RPS14P62263 151 aaKnown RBP11.99□□□□□ -0.49
LINC00959-201ENST00000456581 CYP4F2P78329 520 aa11.99□□□□□ -0.49
LINC00959-201ENST00000456581 DDX39BQ13838 428 aaKnown RBP11.99□□□□□ -0.49
LINC00959-201ENST00000456581 PDE12Q6L8Q7 609 aaKnown RBP11.99□□□□□ -0.49
LINC00959-201ENST00000456581 GPR153Q6NV75 609 aa11.99□□□□□ -0.49
LINC00959-201ENST00000456581 FKBP9P1Q75LS8 142 aa11.99□□□□□ -0.49
LINC00959-201ENST00000456581 LMNTD1Q8N9Z9 388 aa11.99□□□□□ -0.49
LINC00959-201ENST00000456581 SELENOMQ8WWX9 145 aa11.99□□□□□ -0.49
LINC00959-201ENST00000456581 ATG10Q9H0Y0 220 aa11.99□□□□□ -0.49
LINC00959-201ENST00000456581 TRIT1Q9H3H1 467 aaKnown RBP11.99□□□□□ -0.49
LINC00959-201ENST00000456581 PRM3Q9NNZ6 103 aa11.99□□□□□ -0.49
LINC00959-201ENST00000456581 HMG20AQ9NP66 347 aa11.99□□□□□ -0.49
LINC00959-201ENST00000456581 ARL15Q9NXU5 204 aa11.99□□□□□ -0.49
LINC00959-201ENST00000456581 TBC1D14Q9P2M4 693 aa11.99□□□□□ -0.49
LINC00959-201ENST00000456581 ORC6Q9Y5N6 252 aa11.99□□□□□ -0.49
LINC00959-201ENST00000456581 C2orf16Q68DN1 1984 aa11.99□□□□□ -0.49
LINC00959-201ENST00000456581 PSMD11O00231 422 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 KPNA4O00629 521 aaPredicted RBP11.98□□□□□ -0.49
LINC00959-201ENST00000456581 PCDHGA12O60330 932 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 CNOT3O75175 753 aaKnown RBP11.98□□□□□ -0.49
LINC00959-201ENST00000456581 CPSF4O95639 269 aaKnown RBP11.98□□□□□ -0.49
LINC00959-201ENST00000456581 IL6P05231 212 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 CISD3P0C7P0 127 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 EPB42P16452 691 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 SDC1P18827 310 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 DDX6P26196 483 aaKnown RBP eCLIP11.98□□□□□ -0.49
LINC00959-201ENST00000456581 LIPAP38571 399 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 RPIAP49247 311 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 GABARAPL2P60520 117 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 LYPLAL1Q5VWZ2 237 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 TTC29Q8NA56 475 aaPredicted RBP11.98□□□□□ -0.49
LINC00959-201ENST00000456581 ATG16L2Q8NAA4 619 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 YIPF6Q96EC8 236 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 KCNC2Q96PR1 638 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 ZNF300Q96RE9 604 aaPredicted RBP11.98□□□□□ -0.49
LINC00959-201ENST00000456581 CEP44Q9C0F1 390 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 FAM83DQ9H4H8 585 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 TAS2R16Q9NYV7 291 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 NAALAD2Q9Y3Q0 740 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 RFXANKO14593 260 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 SGTAO43765 313 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 KCNK2O95069 426 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 ADH5P11766 374 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 ACPPP15309 386 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 ACVR2AP27037 513 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 CTSCP53634 463 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 MADCAM1Q13477 382 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 FAM78AQ5JUQ0 283 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 ZNF621Q6ZSS3 439 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 CALHM3Q86XJ0 350 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 VN1R2Q8NFZ6 395 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 OR52J3Q8NH60 311 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 DYNC2LI1Q8TCX1 351 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 DNASE1L2Q92874 299 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 SLX1AQ9BQ83 275 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 SLIRPQ9GZT3 109 aaKnown RBP11.98□□□□□ -0.49
LINC00959-201ENST00000456581 PALMDQ9NP74 551 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 ACOT13Q9NPJ3 140 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 GON4LQ3T8J9 2241 aa11.98□□□□□ -0.49
LINC00959-201ENST00000456581 SLC16A6O15403 523 aa11.97□□□□□ -0.49
LINC00959-201ENST00000456581 WBP4O75554 376 aaKnown RBP11.97□□□□□ -0.49
LINC00959-201ENST00000456581 OPN1SWP03999 348 aa11.97□□□□□ -0.49
LINC00959-201ENST00000456581 ATP1B2P14415 290 aaPredicted RBP11.97□□□□□ -0.49
LINC00959-201ENST00000456581 CD36P16671 472 aa11.97□□□□□ -0.49
LINC00959-201ENST00000456581 AOAHP28039 575 aa11.97□□□□□ -0.49
LINC00959-201ENST00000456581 UBE2R2Q712K3 238 aaPredicted RBP11.97□□□□□ -0.49
LINC00959-201ENST00000456581 PARS2Q7L3T8 475 aaKnown RBP11.97□□□□□ -0.49
LINC00959-201ENST00000456581 PLPP6Q8IY26 295 aa11.97□□□□□ -0.49
LINC00959-201ENST00000456581 CACTIN-AS1Q8N1I8 211 aa11.97□□□□□ -0.49
LINC00959-201ENST00000456581 OR6Q1Q8NGQ2 317 aa11.97□□□□□ -0.49
LINC00959-201ENST00000456581 P2RY13Q9BPV8 354 aa11.97□□□□□ -0.49
LINC00959-201ENST00000456581 RUBCNLQ9H714 662 aa11.97□□□□□ -0.49
LINC00959-201ENST00000456581 KCTD5Q9NXV2 234 aa11.97□□□□□ -0.49
LINC00959-201ENST00000456581 ZNF229Q9UJW7 825 aa11.97□□□□□ -0.49
LINC00959-201ENST00000456581 B3GNT3Q9Y2A9 372 aa11.97□□□□□ -0.49
LINC00959-201ENST00000456581 BTBD3Q9Y2F9 522 aa11.97□□□□□ -0.49
LINC00959-201ENST00000456581 WDR37Q9Y2I8 494 aa11.97□□□□□ -0.49
LINC00959-201ENST00000456581 SAMHD1Q9Y3Z3 626 aaKnown RBP11.97□□□□□ -0.49
LINC00959-201ENST00000456581 GPC6Q9Y625 555 aaPredicted RBP11.97□□□□□ -0.49
LINC00959-201ENST00000456581 LRRK1Q38SD2 2015 aa11.97□□□□□ -0.49
LINC00959-201ENST00000456581 DYTNA2CJ06 578 aa11.97□□□□□ -0.49
LINC00959-201ENST00000456581 K7ESM1 405 aa11.97□□□□□ -0.49
LINC00959-201ENST00000456581 RFXAPO00287 272 aa11.97□□□□□ -0.49
LINC00959-201ENST00000456581 STK16O75716 305 aa11.97□□□□□ -0.49
LINC00959-201ENST00000456581 RECQL5O94762 991 aaPredicted RBP11.97□□□□□ -0.49
LINC00959-201ENST00000456581 NTRK1P04629 796 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms