RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 WDR34Q96EX3 536 aa17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 DPH2Q9BQC3 489 aaPredicted RBP17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 TRIT1Q9H3H1 467 aaKnown RBP17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 SELENONQ9NZV5 590 aa17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 BLOC1S6Q9UL45 172 aa17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 KCNE2Q9Y6J6 123 aa17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 H3BM21 787 aa17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 J3QRK9 145 aa17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 FABP3P05413 133 aa17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 EFNA1P20827 205 aaPredicted RBP17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 IGFBP5P24593 272 aa17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 CTNNB1P35222 781 aa17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 DAPP51397 102 aa17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 METAP1P53582 386 aa17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 PHEXP78562 749 aa17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 VLDLRP98155 873 aa17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 SPIN4Q56A73 249 aa17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 KDM4DQ6B0I6 523 aa17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 VTCN1Q7Z7D3 282 aa17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 C12orf40Q86WS4 652 aa17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 MAGED4Q96JG8 741 aa17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 SPATA9Q9BWV2 254 aa17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 CXXC1Q9P0U4 656 aaPredicted RBP17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 EXO1Q9UQ84 846 aaKnown RBP17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 SLC1A7O00341 560 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 KPNA3O00505 521 aaPredicted RBP17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 BCKDKO14874 412 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 XYLBO75191 536 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 SH3BGRLO75368 114 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 BCL10O95999 233 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 ADH5P11766 374 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 TIA1P31483 386 aaKnown RBP eCLIP17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 DNAJA1P31689 397 aaKnown RBP17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 PNLIPRP1P54315 467 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 RPS13P62277 151 aaKnown RBP17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 CDK5R2Q13319 367 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 GTF2H3Q13889 308 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 NR1D2Q14995 579 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 HKDC1Q2TB90 917 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 IQCCQ4KMZ1 466 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 TCEAL5Q5H9L2 206 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 COL13A1Q5TAT6 717 aaPredicted RBP17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 ANXA8L1Q5VT79 327 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 MED27Q6P2C8 311 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 GALNT18Q6P9A2 607 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 PIWIL3Q7Z3Z3 882 aaKnown RBP17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 ZNF566Q969W8 418 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 NRBF2Q96F24 287 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 HSH2DQ96JZ2 352 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 SAMD11Q96NU1 681 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 SIRT5Q9NXA8 310 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 TMEM221A6NGB7 291 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 hCG_2039718K7EN88 272 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 UGT2B11O75310 529 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 FGBP02675 491 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 FUCA1P04066 466 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 ABCB1P08183 1280 aaPredicted RBP17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 NPPBP16860 134 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 FPR1P21462 350 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 IRS1P35568 1242 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 BCAP31P51572 246 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 PIGFQ07326 219 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 RAPSNQ13702 412 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 LAPTM4AQ15012 233 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 SLC15A4Q8N697 577 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 ZFP90Q8TF47 636 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 TMEM165Q9HC07 324 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 PAK1IP1Q9NWT1 392 aaPredicted RBP17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 FZD4Q9ULV1 537 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 SLC27A6Q9Y2P4 619 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 PDE4DIPQ5VU43 2346 aa17.7■□□□□ 0.42
SEMA3B-209ENST00000456560 HOXC11O43248 304 aaPredicted RBP17.69■□□□□ 0.42
SEMA3B-209ENST00000456560 COQ9O75208 318 aa17.69■□□□□ 0.42
SEMA3B-209ENST00000456560 NUDT7P0C024 238 aa17.69■□□□□ 0.42
SEMA3B-209ENST00000456560 CCDC159P0C7I6 412 aa17.69■□□□□ 0.42
SEMA3B-209ENST00000456560 PPIBP23284 216 aaKnown RBP17.69■□□□□ 0.42
SEMA3B-209ENST00000456560 HPCAL1P37235 193 aa17.69■□□□□ 0.42
SEMA3B-209ENST00000456560 ST8SIA6P61647 398 aa17.69■□□□□ 0.42
SEMA3B-209ENST00000456560 TBPL1P62380 186 aa17.69■□□□□ 0.42
SEMA3B-209ENST00000456560 FPGSQ05932 587 aa17.69■□□□□ 0.42
SEMA3B-209ENST00000456560 CAPN13Q6MZZ7 669 aaPredicted RBP17.69■□□□□ 0.42
SEMA3B-209ENST00000456560 GALNT5Q7Z7M9 940 aa17.69■□□□□ 0.42
SEMA3B-209ENST00000456560 NPAS3Q8IXF0 933 aa17.69■□□□□ 0.42
SEMA3B-209ENST00000456560 CFAP206Q8IYR0 622 aa17.69■□□□□ 0.42
SEMA3B-209ENST00000456560 VPS37AQ8NEZ2 397 aa17.69■□□□□ 0.42
SEMA3B-209ENST00000456560 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.69■□□□□ 0.42
SEMA3B-209ENST00000456560 ARRDC3Q96B67 414 aa17.69■□□□□ 0.42
SEMA3B-209ENST00000456560 SGPP1Q9BX95 441 aa17.69■□□□□ 0.42
SEMA3B-209ENST00000456560 PALMDQ9NP74 551 aa17.69■□□□□ 0.42
SEMA3B-209ENST00000456560 EXD2Q9NVH0 621 aa17.69■□□□□ 0.42
SEMA3B-209ENST00000456560 ATP6V1HQ9UI12 483 aa17.69■□□□□ 0.42
SEMA3B-209ENST00000456560 SH2B3Q9UQQ2 575 aa17.69■□□□□ 0.42
SEMA3B-209ENST00000456560 M0QX08 132 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 DIRAS1O95057 198 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 PRNPP04156 253 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 CLK3P49761 638 aaKnown RBP17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 ARHGDIAP52565 204 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 CRYBA2P53672 197 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 PLA2G16P53816 162 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 GAB1Q13480 694 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms