RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-208	ENST00000456173	MFSD8	Q8NHS3	518 aa		11.99	□□□□□ -0.49
NEDD4L-208	ENST00000456173	AP2M1	Q96CW1	435 aa		11.99	□□□□□ -0.49
NEDD4L-208	ENST00000456173	NELL2	Q99435	816 aa		11.99	□□□□□ -0.49
NEDD4L-208	ENST00000456173	KANSL3	Q9P2N6	904 aa		11.99	□□□□□ -0.49
NEDD4L-208	ENST00000456173	ZNF225	Q9UK10	706 aa		11.99	□□□□□ -0.49
NEDD4L-208	ENST00000456173	STUB1	Q9UNE7	303 aa		11.99	□□□□□ -0.49
NEDD4L-208	ENST00000456173	OR10H1	Q9Y4A9	318 aa		11.99	□□□□□ -0.49
NEDD4L-208	ENST00000456173	USP32	Q8NFA0	1604 aa		11.99	□□□□□ -0.49
NEDD4L-208	ENST00000456173	TVP23A	A6NH52	213 aa		11.99	□□□□□ -0.49
NEDD4L-208	ENST00000456173	TF	P02787	698 aa		11.99	□□□□□ -0.49
NEDD4L-208	ENST00000456173	H1F0	P07305	194 aa	Known RBP	11.99	□□□□□ -0.49
NEDD4L-208	ENST00000456173	HSD17B1	P14061	328 aa		11.99	□□□□□ -0.49
NEDD4L-208	ENST00000456173	EPCAM	P16422	314 aa		11.99	□□□□□ -0.49
NEDD4L-208	ENST00000456173	SERPINA4	P29622	427 aa		11.99	□□□□□ -0.49
NEDD4L-208	ENST00000456173	AIF1	P55008	147 aa		11.99	□□□□□ -0.49
NEDD4L-208	ENST00000456173	RHBDL3	P58872	404 aa		11.99	□□□□□ -0.49
NEDD4L-208	ENST00000456173	E2F1	Q01094	437 aa		11.99	□□□□□ -0.49
NEDD4L-208	ENST00000456173	OXA1L	Q15070	435 aa		11.99	□□□□□ -0.49
NEDD4L-208	ENST00000456173	CYBRD1	Q53TN4	286 aa		11.99	□□□□□ -0.49
NEDD4L-208	ENST00000456173	LRRC69	Q6ZNQ3	347 aa		11.99	□□□□□ -0.49
NEDD4L-208	ENST00000456173	QSOX2	Q6ZRP7	698 aa		11.99	□□□□□ -0.49
NEDD4L-208	ENST00000456173	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	11.99	□□□□□ -0.49
NEDD4L-208	ENST00000456173	C2orf73	Q8N5S3	287 aa	Predicted RBP	11.99	□□□□□ -0.49
NEDD4L-208	ENST00000456173	ATP6V1C2	Q8NEY4	427 aa		11.99	□□□□□ -0.49
NEDD4L-208	ENST00000456173	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	11.99	□□□□□ -0.49
NEDD4L-208	ENST00000456173	AGPAT4	Q9NRZ5	378 aa		11.99	□□□□□ -0.49
NEDD4L-208	ENST00000456173	GSKIP	Q9P0R6	139 aa		11.99	□□□□□ -0.49
NEDD4L-208	ENST00000456173	CFAP97	Q9P2B7	532 aa		11.99	□□□□□ -0.49
NEDD4L-208	ENST00000456173	TLR6	Q9Y2C9	796 aa		11.99	□□□□□ -0.49
NEDD4L-208	ENST00000456173	ARL5A	Q9Y689	179 aa		11.99	□□□□□ -0.49
NEDD4L-208	ENST00000456173	SIGLEC1	Q9BZZ2	1709 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173		A0A1W2PPK0	400 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	CD8B2	A6NJW9	211 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	OR6C65	A6NJZ3	312 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	MATN3	O15232	486 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	OR1I1	O60431	355 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	CREBL2	O60519	120 aa	Predicted RBP	11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	CD8B	P10966	210 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	CBX5	P45973	191 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	TGM4	P49221	684 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	MLLT10	P55197	1068 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	SDHAF4	Q5VUM1	108 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	FAM205BP	Q63HN1	556 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	ARMC6	Q6NXE6	501 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	LHFPL3	Q86UP9	236 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	IQCH	Q86VS3	1027 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	NSUN5	Q96P11	429 aa	Known RBP	11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	SLC30A3	Q99726	388 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	MEAF6	Q9HAF1	191 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	TRIM36	Q9NQ86	728 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	ZNF282	Q9UDV7	671 aa	Predicted RBP	11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	CYTH4	Q9UIA0	394 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	MYO5B	Q9ULV0	1848 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	PRSS44	E7EML9	344 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	SCGB1D2	O95969	90 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	LAMP2	P13473	410 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	CD6	P30203	668 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	PTGES3	Q15185	160 aa	Known RBP	11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	OR13C4	Q8NGS5	318 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	ADAMTS15	Q8TE58	950 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	DNAJB3	Q8WWF6	145 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	LRCH3	Q96II8	777 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	TTPAL	Q9BTX7	342 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	11.98	□□□□□ -0.49	8e-8	■■■■□ 26.2
NEDD4L-208	ENST00000456173	MEMO1	Q9Y316	297 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173		A0A1B0GTW7	788 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173		E9PI62	339 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	NIPSNAP2	O75323	286 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	NDUFV1	P49821	464 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	SMS	P52788	366 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	GBX2	P52951	348 aa	Predicted RBP	11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	DSTN	P60981	165 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	GRIK4	Q16099	956 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	KLHL26	Q53HC5	615 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	SMUG1	Q53HV7	270 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	C6orf136	Q5SQH8	315 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	SLC30A6	Q6NXT4	461 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	PGM2L1	Q6PCE3	622 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	CFAP52	Q8N1V2	620 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	OR2L5	Q8NG80	312 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	OR4F6	Q8NGB9	312 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	OR13F1	Q8NGS4	319 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	DDX1	Q92499	740 aa	Known RBP	11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	FCRL3	Q96P31	734 aa	Predicted RBP	11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	OR4K3	Q96R72	315 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	IL12RB2	Q99665	862 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	ACTR6	Q9GZN1	396 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	EIF5A2	Q9GZV4	153 aa	Known RBP	11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	TRPS1	Q9UHF7	1281 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	HIF3A	Q9Y2N7	669 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	PCDHB5	Q9Y5E4	795 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	NFASC	O94856	1347 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	UBFD1	O14562	309 aa	Known RBP	11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	B4GALT4	O60513	344 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	MAF	O75444	373 aa	Predicted RBP	11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	LYPLA2	O95372	231 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	PGAM2	P15259	253 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	ZNF132	P52740	706 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	OR12D2	P58182	307 aa		11.98	□□□□□ -0.49
NEDD4L-208	ENST00000456173	VSX2	P58304	361 aa	Predicted RBP	11.98	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms