RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 ZNF317Q96PQ6 595 aaPredicted RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 PXMP2Q9NR77 195 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 SERINC1Q9NRX5 453 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 CFAP97Q9P2B7 532 aa5.08□□□□□ -1.6
CSMD3-204ENST00000455883 EIF3KQ9UBQ5 218 aaKnown RBP5.08□□□□□ -1.6
CSMD3-204ENST00000455883 SC5DO75845 299 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 MAOAP21397 527 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 CXCR3P49682 368 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 LINGO4Q6UY18 593 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 MBOAT1Q6ZNC8 495 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 OTOP1Q7RTM1 612 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 WFIKKN2Q8TEU8 576 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 CPB2Q96IY4 423 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 SULT4A1Q9BR01 284 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 HOXD1Q9GZZ0 328 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 TPT1P8Q9HAU6 139 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 SPG21Q9NZD8 308 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 COL2A1P02458 1487 aaPredicted RBP5.07□□□□□ -1.6
CSMD3-204ENST00000455883 FLRT2O43155 660 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 PRAMEF2O60811 474 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 RFPL2O75678 378 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 CTDNEP1O95476 244 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 ZNF37AP17032 561 aaPredicted RBP5.07□□□□□ -1.6
CSMD3-204ENST00000455883 JAM2P57087 298 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 PRKCDQ05655 676 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 SLX4IPQ5VYV7 408 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 PGM2L1Q6PCE3 622 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 DPY19L3Q6ZPD9 716 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 FAM183BPQ6ZVS7 135 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 SHKBP1Q8TBC3 707 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 SCGB1C1Q8TD33 95 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 LPGAT1Q92604 370 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 KCNJ9Q92806 393 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 OR2M2Q96R28 347 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 HIPK2Q9H2X6 1198 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 LDAHQ9H6V9 325 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 TMEM260Q9NX78 707 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 KLHL21Q9UJP4 597 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 H3BRB1 525 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 JRKO75564 520 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 KDM4BO94953 1096 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 CDKN2CP42773 168 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 RPL38P63173 70 aaKnown RBP5.07□□□□□ -1.6
CSMD3-204ENST00000455883 SLC18A2Q05940 514 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 DUSP4Q13115 394 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 PXDC1Q5TGL8 231 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 PXKQ7Z7A4 578 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 LRRC56Q8IYG6 542 aaPredicted RBP5.07□□□□□ -1.6
CSMD3-204ENST00000455883 HS3ST5Q8IZT8 346 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 RDH10Q8IZV5 341 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 ZNF382Q96SR6 550 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 CCM2Q9BSQ5 444 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 FUNDC2Q9BWH2 189 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 IRF2BPLQ9H1B7 796 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 OR10A4Q9H209 315 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 TUT1Q9H6E5 874 aaKnown RBP5.07□□□□□ -1.6
CSMD3-204ENST00000455883 ASAH2Q9NR71 780 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 OR7A10O76100 309 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 XKP51811 444 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 DLX5P56178 289 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 PPP2R2BQ00005 443 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 ERFEQ4G0M1 354 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 ZNF529Q6P280 563 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 TICAM1Q8IUC6 712 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 OR10R2Q8NGX6 335 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 TWIST2Q8WVJ9 160 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 ZNF354BQ96LW1 612 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 TTYH2Q9BSA4 534 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 MFSD1Q9H3U5 465 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 PLXND1Q9Y4D7 1925 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 ADORA2AP29274 412 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 FCGRTP55899 365 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 EMX2Q04743 252 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 ST3GAL4Q11206 333 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 CTXN3Q4LDR2 81 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 PERM1Q5SV97 790 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.07□□□□□ -1.6
CSMD3-204ENST00000455883 HIST2H3AQ71DI3 136 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 ECHDC2Q86YB7 292 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 ZDHHC21Q8IVQ6 265 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 MFSD6LQ8IWD5 586 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 FRS2Q8WU20 508 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 HDAC10Q969S8 669 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 AHCYL2Q96HN2 611 aaKnown RBP5.07□□□□□ -1.6
CSMD3-204ENST00000455883 ANKRD60Q9BZ19 345 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 ACTL8Q9H568 366 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.07□□□□□ -1.6
CSMD3-204ENST00000455883 SIRPGQ9P1W8 387 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 COQ4Q9Y3A0 265 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 F8VP50 259 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 ACOT7O00154 380 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 SNCGO76070 127 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 KCNA5P22460 613 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 FKBP2P26885 142 aaKnown RBP5.07□□□□□ -1.6
CSMD3-204ENST00000455883 PRDX5P30044 214 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 SOX11P35716 441 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 HES5Q5TA89 166 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 DPY19L2P1Q6NXN4 242 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 SLC27A4Q6P1M0 643 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 INTS5Q6P9B9 1019 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms