RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 NIPSNAP2O75323 286 aa13.44□□□□□ -0.26
LYSMD3-202ENST00000453259 WISP2O76076 250 aa13.44□□□□□ -0.26
LYSMD3-202ENST00000453259 JAK1P23458 1154 aa13.44□□□□□ -0.26
LYSMD3-202ENST00000453259 CHRNB4P30926 498 aa13.44□□□□□ -0.26
LYSMD3-202ENST00000453259 TRHRP34981 398 aaPredicted RBP13.44□□□□□ -0.26
LYSMD3-202ENST00000453259 CDK16Q00536 496 aa13.44□□□□□ -0.26
LYSMD3-202ENST00000453259 ACTN3Q08043 901 aaPredicted RBP13.44□□□□□ -0.26
LYSMD3-202ENST00000453259 TSTA3Q13630 321 aaPredicted RBP13.44□□□□□ -0.26
LYSMD3-202ENST00000453259 USP10Q14694 798 aaKnown RBP13.44□□□□□ -0.26
LYSMD3-202ENST00000453259 ABRAXAS2Q15018 415 aa13.44□□□□□ -0.26
LYSMD3-202ENST00000453259 SFT2D3Q587I9 215 aa13.44□□□□□ -0.26
LYSMD3-202ENST00000453259 THEMIS2Q5TEJ8 643 aa13.44□□□□□ -0.26
LYSMD3-202ENST00000453259 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.44□□□□□ -0.26
LYSMD3-202ENST00000453259 RPS19BP1Q86WX3 136 aaKnown RBP13.44□□□□□ -0.26
LYSMD3-202ENST00000453259 LILRB4Q8NHJ6 448 aa13.44□□□□□ -0.26
LYSMD3-202ENST00000453259 FAM57AQ8TBR7 257 aa13.44□□□□□ -0.26
LYSMD3-202ENST00000453259 ELP5Q8TE02 316 aa13.44□□□□□ -0.26
LYSMD3-202ENST00000453259 HES6Q96HZ4 224 aa13.44□□□□□ -0.26
LYSMD3-202ENST00000453259 NPAS2Q99743 824 aa13.44□□□□□ -0.26
LYSMD3-202ENST00000453259 TSPAN10Q9H1Z9 355 aaPredicted RBP13.44□□□□□ -0.26
LYSMD3-202ENST00000453259 KLF13Q9Y2Y9 288 aaPredicted RBP13.44□□□□□ -0.26
LYSMD3-202ENST00000453259 GFYI3L273 518 aa13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 NDC80O14777 642 aa13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 ZBTB14O43829 449 aa13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 VAPBO95292 243 aa13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 SLC35G6P0C7Q6 338 aa13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 MPC1LP0DKB6 136 aa13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 PAMP19021 973 aa13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 CCND1P24385 295 aa13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 ARNTP27540 789 aa13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 FMO4P31512 558 aa13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 PTGS2P35354 604 aa13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 SLC26A5P58743 744 aa13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 RHAGQ02094 409 aa13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 HERC3Q15034 1050 aa13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 RPS6KA1Q15418 735 aa13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 MAPKAPK3Q16644 382 aa13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 ACSBG2Q5FVE4 666 aa13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 FCRLBQ6BAA4 426 aa13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 KIAA0930Q6ICG6 404 aaPredicted RBP13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 LRRC8EQ6NSJ5 796 aa13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 VN1R4Q7Z5H5 301 aa13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 REXO1L1PQ8IX06 675 aa13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 LRRC56Q8IYG6 542 aaPredicted RBP13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 CHDHQ8NE62 594 aaPredicted RBP13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 ASB11Q8WXH4 323 aa13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 ATG4AQ8WYN0 398 aa13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 KCNJ9Q92806 393 aa13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 NINJ1Q92982 152 aa13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 TM4SF19Q96DZ7 209 aa13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 HES7Q9BYE0 225 aa13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 TSGA10Q9BZW7 698 aa13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 LACRTQ9GZZ8 138 aa13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 TP63Q9H3D4 680 aaPredicted RBP13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 CLK4Q9HAZ1 481 aaKnown RBP13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 CCDC177Q9NQR7 707 aaPredicted RBP13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 ANKRD10Q9NXR5 420 aa13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 NEU2Q9Y3R4 380 aa13.43□□□□□ -0.26
LYSMD3-202ENST00000453259 TCRBV7S2A1N4TA0A589 114 aa13.42□□□□□ -0.26
LYSMD3-202ENST00000453259 KLRC4-KLRK1H3BQV0 150 aa13.42□□□□□ -0.26
LYSMD3-202ENST00000453259 H7BY64 318 aa13.42□□□□□ -0.26
LYSMD3-202ENST00000453259 FCHO1O14526 889 aa13.42□□□□□ -0.26
LYSMD3-202ENST00000453259 TFECO14948 347 aaPredicted RBP13.42□□□□□ -0.26
LYSMD3-202ENST00000453259 FAM155BO75949 473 aa13.42□□□□□ -0.26
LYSMD3-202ENST00000453259 NMBRP28336 390 aa13.42□□□□□ -0.26
LYSMD3-202ENST00000453259 MSX1P28360 303 aa13.42□□□□□ -0.26
LYSMD3-202ENST00000453259 GRK3P35626 688 aa13.42□□□□□ -0.26
LYSMD3-202ENST00000453259 HLCSP50747 726 aa13.42□□□□□ -0.26
LYSMD3-202ENST00000453259 CLCN7P51798 805 aa13.42□□□□□ -0.26
LYSMD3-202ENST00000453259 ART1P52961 327 aa13.42□□□□□ -0.26
LYSMD3-202ENST00000453259 SESN2P58004 480 aaPredicted RBP13.42□□□□□ -0.26
LYSMD3-202ENST00000453259 SKOR2Q2VWA4 1001 aaPredicted RBP13.42□□□□□ -0.26
LYSMD3-202ENST00000453259 SEL1L2Q5TEA6 688 aa13.42□□□□□ -0.26
LYSMD3-202ENST00000453259 CES4AQ5XG92 561 aa13.42□□□□□ -0.26
LYSMD3-202ENST00000453259 ARHGAP11AQ6P4F7 1023 aa13.42□□□□□ -0.26
LYSMD3-202ENST00000453259 CILP2Q8IUL8 1156 aa13.42□□□□□ -0.26
LYSMD3-202ENST00000453259 MYRIPQ8NFW9 859 aa13.42□□□□□ -0.26
LYSMD3-202ENST00000453259 PRAP1Q96NZ9 151 aa13.42□□□□□ -0.26
LYSMD3-202ENST00000453259 CXXC4Q9H2H0 198 aa13.42□□□□□ -0.26
LYSMD3-202ENST00000453259 TSPY26PQ9H489 355 aa13.42□□□□□ -0.26
LYSMD3-202ENST00000453259 KCNJ16Q9NPI9 418 aa13.42□□□□□ -0.26
LYSMD3-202ENST00000453259 HCN3Q9P1Z3 774 aa13.42□□□□□ -0.26
LYSMD3-202ENST00000453259 COMMD10Q9Y6G5 202 aa13.42□□□□□ -0.26
LYSMD3-202ENST00000453259 GTF3C1Q12789 2109 aa13.42□□□□□ -0.26
LYSMD3-202ENST00000453259 ABCA2Q9BZC7 2435 aa13.41□□□□□ -0.26
LYSMD3-202ENST00000453259 USP27XA6NNY8 438 aa13.41□□□□□ -0.26
LYSMD3-202ENST00000453259 SGK494L7N484 410 aa13.41□□□□□ -0.26
LYSMD3-202ENST00000453259 PRMT3O60678 531 aa13.41□□□□□ -0.26
LYSMD3-202ENST00000453259 IL1RNP18510 177 aa13.41□□□□□ -0.26
LYSMD3-202ENST00000453259 OR4D2P58180 307 aa13.41□□□□□ -0.26
LYSMD3-202ENST00000453259 TFF3Q07654 80 aa13.41□□□□□ -0.26
LYSMD3-202ENST00000453259 KIF5AQ12840 1032 aa13.41□□□□□ -0.26
LYSMD3-202ENST00000453259 KCNJ11Q14654 390 aa13.41□□□□□ -0.26
LYSMD3-202ENST00000453259 DRICH1Q6PGQ1 229 aaPredicted RBP13.41□□□□□ -0.26
LYSMD3-202ENST00000453259 ACAD11Q709F0 780 aa13.41□□□□□ -0.26
LYSMD3-202ENST00000453259 FGD2Q7Z6J4 655 aa13.41□□□□□ -0.26
LYSMD3-202ENST00000453259 KIAA1328Q86T90 577 aa13.41□□□□□ -0.26
LYSMD3-202ENST00000453259 ASPGQ86U10 573 aa13.41□□□□□ -0.26
LYSMD3-202ENST00000453259 DMRTC2Q8IXT2 367 aaPredicted RBP13.41□□□□□ -0.26
LYSMD3-202ENST00000453259 GPATCH11Q8N954 259 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms