RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 FAM53BQ14153 422 aa18.98■□□□□ 0.63
COL9A3-202ENST00000452372 RASA2Q15283 850 aa18.98■□□□□ 0.63
COL9A3-202ENST00000452372 ATG9BQ674R7 924 aa18.98■□□□□ 0.63
COL9A3-202ENST00000452372 MRPL14Q6P1L8 145 aaKnown RBP18.98■□□□□ 0.63
COL9A3-202ENST00000452372 C16orf46Q6P387 395 aa18.98■□□□□ 0.63
COL9A3-202ENST00000452372 LRRC70Q7Z2Q7 622 aa18.98■□□□□ 0.63
COL9A3-202ENST00000452372 SYVN1Q86TM6 617 aa18.98■□□□□ 0.63
COL9A3-202ENST00000452372 ASPGQ86U10 573 aa18.98■□□□□ 0.63
COL9A3-202ENST00000452372 ACMSDQ8TDX5 336 aa18.98■□□□□ 0.63
COL9A3-202ENST00000452372 SLC13A3Q8WWT9 602 aa18.98■□□□□ 0.63
COL9A3-202ENST00000452372 CAVIN3Q969G5 261 aa18.98■□□□□ 0.63
COL9A3-202ENST00000452372 MVB12AQ96EY5 273 aa18.98■□□□□ 0.63
COL9A3-202ENST00000452372 TRIM4Q9C037 500 aa18.98■□□□□ 0.63
COL9A3-202ENST00000452372 CLMPQ9H6B4 373 aa18.98■□□□□ 0.63
COL9A3-202ENST00000452372 RAB21Q9UL25 225 aa18.98■□□□□ 0.63
COL9A3-202ENST00000452372 TCFL5Q9UL49 500 aa18.98■□□□□ 0.63
COL9A3-202ENST00000452372 CDC14AQ9UNH5 594 aa18.98■□□□□ 0.63
COL9A3-202ENST00000452372 ASB1Q9Y576 335 aa18.98■□□□□ 0.63
COL9A3-202ENST00000452372 HEMK1Q9Y5R4 338 aaPredicted RBP18.98■□□□□ 0.63
COL9A3-202ENST00000452372 COL12A1Q99715 3063 aa18.98■□□□□ 0.63
COL9A3-202ENST00000452372 K7EPI3 171 aa18.97■□□□□ 0.63
COL9A3-202ENST00000452372 CCNT2O60583 730 aaKnown RBP18.97■□□□□ 0.63
COL9A3-202ENST00000452372 H2AFYO75367 372 aaKnown RBP18.97■□□□□ 0.63
COL9A3-202ENST00000452372 KLF7O75840 302 aaPredicted RBP18.97■□□□□ 0.63
COL9A3-202ENST00000452372 ALBP02768 609 aa18.97■□□□□ 0.63
COL9A3-202ENST00000452372 TUBBP07437 444 aa18.97■□□□□ 0.63
COL9A3-202ENST00000452372 PRKAR1AP10644 381 aa18.97■□□□□ 0.63
COL9A3-202ENST00000452372 GFAPP14136 432 aa18.97■□□□□ 0.63
COL9A3-202ENST00000452372 VARSP26640 1264 aaKnown RBP18.97■□□□□ 0.63
COL9A3-202ENST00000452372 AHRP35869 848 aa18.97■□□□□ 0.63
COL9A3-202ENST00000452372 OR1D4P47884 311 aa18.97■□□□□ 0.63
COL9A3-202ENST00000452372 AGTR2P50052 363 aa18.97■□□□□ 0.63
COL9A3-202ENST00000452372 ALDH18A1P54886 795 aaKnown RBP18.97■□□□□ 0.63
COL9A3-202ENST00000452372 POLE2P56282 527 aa18.97■□□□□ 0.63
COL9A3-202ENST00000452372 CDC20Q12834 499 aa18.97■□□□□ 0.63
COL9A3-202ENST00000452372 ERV3-1Q14264 604 aa18.97■□□□□ 0.63
COL9A3-202ENST00000452372 SLC9A5Q14940 896 aa18.97■□□□□ 0.63
COL9A3-202ENST00000452372 SETDB1Q15047 1291 aa18.97■□□□□ 0.63
COL9A3-202ENST00000452372 PDK4Q16654 411 aa18.97■□□□□ 0.63
COL9A3-202ENST00000452372 NDUFA9Q16795 377 aa18.97■□□□□ 0.63
COL9A3-202ENST00000452372 PFKFB4Q16877 469 aa18.97■□□□□ 0.63
COL9A3-202ENST00000452372 OVCH1Q7RTY7 1134 aa18.97■□□□□ 0.63
COL9A3-202ENST00000452372 LCA5Q86VQ0 697 aa18.97■□□□□ 0.63
COL9A3-202ENST00000452372 DTWD1Q8N5C7 304 aa18.97■□□□□ 0.63
COL9A3-202ENST00000452372 SNX31Q8N9S9 440 aa18.97■□□□□ 0.63
COL9A3-202ENST00000452372 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.97■□□□□ 0.63
COL9A3-202ENST00000452372 FKBP10Q96AY3 582 aa18.97■□□□□ 0.63
COL9A3-202ENST00000452372 SCYL1Q96KG9 808 aa18.97■□□□□ 0.63
COL9A3-202ENST00000452372 CATSPER2Q96P56 530 aa18.97■□□□□ 0.63
COL9A3-202ENST00000452372 MRPL57Q9BQC6 102 aaKnown RBP18.97■□□□□ 0.63
COL9A3-202ENST00000452372 EHD1Q9H4M9 534 aa18.97■□□□□ 0.63
COL9A3-202ENST00000452372 ZNF304Q9HCX3 659 aa18.97■□□□□ 0.63
COL9A3-202ENST00000452372 ZFP69BQ9UJL9 534 aa18.97■□□□□ 0.63
COL9A3-202ENST00000452372 PADI2Q9Y2J8 665 aa18.97■□□□□ 0.63
COL9A3-202ENST00000452372 PTPN13Q12923 2485 aa18.97■□□□□ 0.63
COL9A3-202ENST00000452372 CLGNO14967 610 aa18.96■□□□□ 0.63
COL9A3-202ENST00000452372 STATHP02808 62 aa18.96■□□□□ 0.63
COL9A3-202ENST00000452372 NUDT17P0C025 328 aa18.96■□□□□ 0.63
COL9A3-202ENST00000452372 KCNAB2Q13303 367 aa18.96■□□□□ 0.63
COL9A3-202ENST00000452372 PWP1Q13610 501 aa18.96■□□□□ 0.63
COL9A3-202ENST00000452372 UGT8Q16880 541 aa18.96■□□□□ 0.63
COL9A3-202ENST00000452372 ATP1A1-AS1Q5TC04 95 aa18.96■□□□□ 0.63
COL9A3-202ENST00000452372 TMEM214Q6NUQ4 689 aaKnown RBP18.96■□□□□ 0.63
COL9A3-202ENST00000452372 ATG14Q6ZNE5 492 aa18.96■□□□□ 0.63
COL9A3-202ENST00000452372 METTL27Q8N6F8 245 aaPredicted RBP18.96■□□□□ 0.63
COL9A3-202ENST00000452372 WDR34Q96EX3 536 aa18.96■□□□□ 0.63
COL9A3-202ENST00000452372 MACROD1Q9BQ69 325 aa18.96■□□□□ 0.63
COL9A3-202ENST00000452372 PITHD1Q9GZP4 211 aaPredicted RBP18.96■□□□□ 0.63
COL9A3-202ENST00000452372 SLC26A1Q9H2B4 701 aa18.96■□□□□ 0.63
COL9A3-202ENST00000452372 NT5DC2Q9H857 520 aa18.96■□□□□ 0.63
COL9A3-202ENST00000452372 CPSF2Q9P2I0 782 aaKnown RBP18.96■□□□□ 0.63
COL9A3-202ENST00000452372 COPG2Q9UBF2 871 aa18.96■□□□□ 0.63
COL9A3-202ENST00000452372 XPR1Q9UBH6 696 aa18.96■□□□□ 0.63
COL9A3-202ENST00000452372 OPTCQ9UBM4 332 aa18.96■□□□□ 0.63
COL9A3-202ENST00000452372 TMCO1Q9UM00 188 aa18.96■□□□□ 0.63
COL9A3-202ENST00000452372 FOXS1O43638 330 aa18.95■□□□□ 0.62
COL9A3-202ENST00000452372 PRAMEF4O60810 478 aa18.95■□□□□ 0.62
COL9A3-202ENST00000452372 CNOT3O75175 753 aaKnown RBP18.95■□□□□ 0.62
COL9A3-202ENST00000452372 CDH16O75309 829 aa18.95■□□□□ 0.62
COL9A3-202ENST00000452372 FURINP09958 794 aa18.95■□□□□ 0.62
COL9A3-202ENST00000452372 SLC35G6P0C7Q6 338 aa18.95■□□□□ 0.62
COL9A3-202ENST00000452372 ATXN8OSP0DMR3 200 aa18.95■□□□□ 0.62
COL9A3-202ENST00000452372 EPORP19235 508 aa18.95■□□□□ 0.62
COL9A3-202ENST00000452372 CCR10P46092 362 aa18.95■□□□□ 0.62
COL9A3-202ENST00000452372 SLCO1A2P46721 670 aa18.95■□□□□ 0.62
COL9A3-202ENST00000452372 PCDH1Q08174 1060 aa18.95■□□□□ 0.62
COL9A3-202ENST00000452372 SLBPQ14493 270 aaKnown RBP eCLIP18.95■□□□□ 0.62
COL9A3-202ENST00000452372 NAA30Q147X3 362 aaPredicted RBP18.95■□□□□ 0.62
COL9A3-202ENST00000452372 RBBP5Q15291 538 aaKnown RBP18.95■□□□□ 0.62
COL9A3-202ENST00000452372 PCBP2Q15366 365 aaKnown RBP eCLIP18.95■□□□□ 0.622e-6■■■■□ 20.5
COL9A3-202ENST00000452372 XKR6Q5GH73 641 aa18.95■□□□□ 0.62
COL9A3-202ENST00000452372 PRAMEF9Q5VWM5 478 aa18.95■□□□□ 0.62
COL9A3-202ENST00000452372 METTL2BQ6P1Q9 378 aaKnown RBP18.95■□□□□ 0.62
COL9A3-202ENST00000452372 COX15Q7KZN9 410 aa18.95■□□□□ 0.62
COL9A3-202ENST00000452372 TMEM151AQ8N4L1 468 aa18.95■□□□□ 0.62
COL9A3-202ENST00000452372 ANKRD53Q8N9V6 530 aa18.95■□□□□ 0.62
COL9A3-202ENST00000452372 KCT2Q8NC54 265 aa18.95■□□□□ 0.62
COL9A3-202ENST00000452372 TRPV3Q8NET8 790 aa18.95■□□□□ 0.62
COL9A3-202ENST00000452372 EPS8L3Q8TE67 593 aaKnown RBP18.95■□□□□ 0.62
COL9A3-202ENST00000452372 COL26A1Q96A83 441 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms