RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 PCBP2Q15366 365 aaKnown RBP eCLIP6.93□□□□□ -1.3
BEST1-202ENST00000449131 ATP13A5Q4VNC0 1218 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 CRTC2Q53ET0 693 aaPredicted RBP6.93□□□□□ -1.3
BEST1-202ENST00000449131 CYBRD1Q53TN4 286 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 RNASE12Q5GAN4 147 aaKnown RBP6.93□□□□□ -1.3
BEST1-202ENST00000449131 CLLU1OSQ5K130 101 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 SMARCD3Q6STE5 483 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 PIANPQ8IYJ0 282 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 CADM2Q8N3J6 435 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 OR8J3Q8NGG0 315 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 CNIH3Q8TBE1 160 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 NUDT8Q8WV74 236 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 C3orf30Q96M34 536 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 HERC2P3Q9BVR0 1158 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 KCNH6Q9H252 994 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 TMEM27Q9HBJ8 222 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 ADAP2Q9NPF8 381 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 RNF186Q9NXI6 227 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 MRPS33Q9Y291 106 aaKnown RBP6.93□□□□□ -1.3
BEST1-202ENST00000449131 DLGAP4Q9Y2H0 992 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 TMEM98Q9Y2Y6 226 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 OARD1Q9Y530 152 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 OAS3Q9Y6K5 1087 aaKnown RBP6.93□□□□□ -1.3
BEST1-202ENST00000449131 CPSF4LA6NMK7 179 aaKnown RBP6.93□□□□□ -1.3
BEST1-202ENST00000449131 TSPAN6O43657 245 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 PSIP1O75475 530 aaKnown RBP6.93□□□□□ -1.3
BEST1-202ENST00000449131 LEFTY1O75610 366 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 GJB3O75712 270 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 RASAL1O95294 804 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 SLC35G6P0C7Q6 338 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 ADH5P11766 374 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 CYBAP13498 195 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 PSMA3P25788 255 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 ACRV1P26436 265 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 PRDX3P30048 256 aaKnown RBP6.93□□□□□ -1.3
BEST1-202ENST00000449131 OR1E2P47887 323 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 CRISP3P54108 245 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 ADAM17P78536 824 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 PPIGQ13427 754 aaKnown RBP eCLIP6.93□□□□□ -1.3
BEST1-202ENST00000449131 NDUFAF6Q330K2 333 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 C2orf27AQ580R0 203 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 CMPK2Q5EBM0 449 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 PAGE3Q5JUK9 113 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 ATAT1Q5SQI0 421 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 C1QTNF12Q5T7M4 302 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 KANK2Q63ZY3 851 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 CEACAM20Q6UY09 585 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 GRASPQ7Z6J2 395 aaPredicted RBP6.93□□□□□ -1.3
BEST1-202ENST00000449131 ZFAND4Q86XD8 727 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 GEMIN6Q8WXD5 167 aaKnown RBP6.93□□□□□ -1.3
BEST1-202ENST00000449131 CSNK1G1Q9HCP0 422 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 MRPS30Q9NP92 439 aaKnown RBP6.93□□□□□ -1.3
BEST1-202ENST00000449131 TREX1Q9NSU2 369 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 RHCGQ9UBD6 479 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 MALT1Q9UDY8 824 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 BRWD1Q9NSI6 2320 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 MAST2Q6P0Q8 1798 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 ERI3O43414 337 aaKnown RBP6.93□□□□□ -1.3
BEST1-202ENST00000449131 SCN2BO60939 215 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 INMTO95050 263 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 IFNGP01579 166 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 HSD17B1P14061 328 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 CPN2P22792 545 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 ITPKBP27987 946 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 GABRB3P28472 473 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 ARRB2P32121 409 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 MAP2K4P45985 399 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 AVPR1BP47901 424 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 XKP51811 444 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 RPS3AP61247 264 aaKnown RBP6.93□□□□□ -1.3
BEST1-202ENST00000449131 LGALS3BPQ08380 585 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 LRRC32Q14392 662 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 C4orf46Q504U0 113 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 RAB41Q5JT25 222 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 C6orf141Q5SZD1 244 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 NCEH1Q6PIU2 408 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 ALKAL1Q6UXT8 129 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 ZNF783Q6ZMS7 281 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 HDDC2Q7Z4H3 204 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 FAM220AQ7Z4H9 259 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 TSPAN33Q86UF1 283 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 RAB43Q86YS6 212 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 ADGRG2Q8IZP9 1017 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 ANKFN1Q8N957 763 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 TMEM145Q8NBT3 493 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 ZNF696Q9H7X3 374 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 TM9SF3Q9HD45 589 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 SDR39U1Q9NRG7 319 aaPredicted RBP6.93□□□□□ -1.3
BEST1-202ENST00000449131 TMEM9Q9P0T7 183 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 SLAMF8Q9P0V8 285 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 PLAGL1Q9UM63 463 aa6.93□□□□□ -1.3
BEST1-202ENST00000449131 LRRC72A6NJI9 287 aa6.92□□□□□ -1.3
BEST1-202ENST00000449131 FAM47E-STBD1D6RA91 191 aa6.92□□□□□ -1.3
BEST1-202ENST00000449131 BPIP17213 487 aa6.92□□□□□ -1.3
BEST1-202ENST00000449131 KDELR2P33947 212 aa6.92□□□□□ -1.3
BEST1-202ENST00000449131 STXBP1P61764 594 aaKnown RBP6.92□□□□□ -1.3
BEST1-202ENST00000449131 FPGSQ05932 587 aa6.92□□□□□ -1.3
BEST1-202ENST00000449131 ILF3Q12906 894 aaKnown RBP eCLIP6.92□□□□□ -1.3
BEST1-202ENST00000449131 CLEC12AQ5QGZ9 265 aa6.92□□□□□ -1.3
BEST1-202ENST00000449131 PLEKHS1Q5SXH7 462 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms