RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 ARGFXA6NJG6 315 aa15.58■□□□□ 0.08
SF3A1-204ENST00000447376 NDUFS4O43181 175 aa15.58■□□□□ 0.08
SF3A1-204ENST00000447376 CCNT2O60583 730 aaKnown RBP15.58■□□□□ 0.08
SF3A1-204ENST00000447376 KLF7O75840 302 aaPredicted RBP15.58■□□□□ 0.08
SF3A1-204ENST00000447376 ONECUT2O95948 504 aa15.58■□□□□ 0.08
SF3A1-204ENST00000447376 FURINP09958 794 aa15.58■□□□□ 0.08
SF3A1-204ENST00000447376 HPDP32754 393 aaPredicted RBP15.58■□□□□ 0.08
SF3A1-204ENST00000447376 BCL6P41182 706 aa15.58■□□□□ 0.08
SF3A1-204ENST00000447376 SLC6A12P48065 614 aa15.58■□□□□ 0.08
SF3A1-204ENST00000447376 GLRBP48167 497 aa15.58■□□□□ 0.08
SF3A1-204ENST00000447376 NFKB2Q00653 900 aa15.58■□□□□ 0.08
SF3A1-204ENST00000447376 MEF2AQ02078 507 aaPredicted RBP15.58■□□□□ 0.08
SF3A1-204ENST00000447376 DLG1Q12959 904 aa15.58■□□□□ 0.08
SF3A1-204ENST00000447376 DSG2Q14126 1118 aa15.58■□□□□ 0.08
SF3A1-204ENST00000447376 RBBP5Q15291 538 aaKnown RBP15.58■□□□□ 0.08
SF3A1-204ENST00000447376 NKG7Q16617 165 aa15.58■□□□□ 0.08
SF3A1-204ENST00000447376 CATSPEREQ5SY80 951 aa15.58■□□□□ 0.08
SF3A1-204ENST00000447376 PCSK4Q6UW60 755 aa15.58■□□□□ 0.08
SF3A1-204ENST00000447376 NXPE4Q6UWF7 544 aa15.58■□□□□ 0.08
SF3A1-204ENST00000447376 APLFQ8IW19 511 aaPredicted RBP15.58■□□□□ 0.08
SF3A1-204ENST00000447376 CLEC1AQ8NC01 280 aa15.58■□□□□ 0.08
SF3A1-204ENST00000447376 PDPRQ8NCN5 879 aa15.58■□□□□ 0.08
SF3A1-204ENST00000447376 TTLQ8NG68 377 aa15.58■□□□□ 0.08
SF3A1-204ENST00000447376 OR4K1Q8NGD4 311 aa15.58■□□□□ 0.08
SF3A1-204ENST00000447376 C9orf43Q8TAL5 461 aaPredicted RBP15.58■□□□□ 0.08
SF3A1-204ENST00000447376 SCYL1Q96KG9 808 aa15.58■□□□□ 0.08
SF3A1-204ENST00000447376 SLC25A18Q9H1K4 315 aa15.58■□□□□ 0.08
SF3A1-204ENST00000447376 RRAGDQ9NQL2 400 aaPredicted RBP15.58■□□□□ 0.08
SF3A1-204ENST00000447376 TRPC4Q9UBN4 977 aa15.58■□□□□ 0.08
SF3A1-204ENST00000447376 MGAQ8IWI9 3026 aa15.58■□□□□ 0.08
SF3A1-204ENST00000447376 HEATR5BQ9P2D3 2071 aa15.57■□□□□ 0.08
SF3A1-204ENST00000447376 A0A0A6YYC8 382 aaPredicted RBP15.57■□□□□ 0.08
SF3A1-204ENST00000447376 CCDC151A5D8V7 595 aa15.57■□□□□ 0.08
SF3A1-204ENST00000447376 I3L1I5 382 aaPredicted RBP15.57■□□□□ 0.08
SF3A1-204ENST00000447376 KLHL41O60662 606 aa15.57■□□□□ 0.08
SF3A1-204ENST00000447376 GFAPP14136 432 aa15.57■□□□□ 0.08
SF3A1-204ENST00000447376 AHRP35869 848 aa15.57■□□□□ 0.08
SF3A1-204ENST00000447376 GGT5P36269 586 aa15.57■□□□□ 0.08
SF3A1-204ENST00000447376 GMPRP36959 345 aa15.57■□□□□ 0.08
SF3A1-204ENST00000447376 GDF5P43026 501 aa15.57■□□□□ 0.08
SF3A1-204ENST00000447376 HSPA7P48741 367 aa15.57■□□□□ 0.08
SF3A1-204ENST00000447376 PWP1Q13610 501 aa15.57■□□□□ 0.08
SF3A1-204ENST00000447376 COL9A2Q14055 689 aaPredicted RBP15.57■□□□□ 0.08
SF3A1-204ENST00000447376 HERC3Q15034 1050 aa15.57■□□□□ 0.08
SF3A1-204ENST00000447376 RBBP7Q16576 425 aa15.57■□□□□ 0.08
SF3A1-204ENST00000447376 PDK4Q16654 411 aa15.57■□□□□ 0.08
SF3A1-204ENST00000447376 HIST2H2ACQ16777 129 aaPredicted RBP15.57■□□□□ 0.08
SF3A1-204ENST00000447376 HIST2H2AA3Q6FI13 130 aa15.57■□□□□ 0.08
SF3A1-204ENST00000447376 LRRC70Q7Z2Q7 622 aa15.57■□□□□ 0.08
SF3A1-204ENST00000447376 KLHDC8AQ8IYD2 350 aa15.57■□□□□ 0.08
SF3A1-204ENST00000447376 EXD3Q8N9H8 876 aa15.57■□□□□ 0.08
SF3A1-204ENST00000447376 ZCCHC10Q8TBK6 192 aa15.57■□□□□ 0.08
SF3A1-204ENST00000447376 EPS8L3Q8TE67 593 aaKnown RBP15.57■□□□□ 0.08
SF3A1-204ENST00000447376 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.57■□□□□ 0.08
SF3A1-204ENST00000447376 ATOH8Q96SQ7 321 aa15.57■□□□□ 0.08
SF3A1-204ENST00000447376 CRB3Q9BUF7 120 aa15.57■□□□□ 0.08
SF3A1-204ENST00000447376 SARGQ9BW04 601 aa15.57■□□□□ 0.08
SF3A1-204ENST00000447376 PITHD1Q9GZP4 211 aaPredicted RBP15.57■□□□□ 0.08
SF3A1-204ENST00000447376 ING2Q9H160 280 aa15.57■□□□□ 0.08
SF3A1-204ENST00000447376 SOX17Q9H6I2 414 aaPredicted RBP15.57■□□□□ 0.08
SF3A1-204ENST00000447376 MKKSQ9NPJ1 570 aaPredicted RBP15.57■□□□□ 0.08
SF3A1-204ENST00000447376 SEMA3GQ9NS98 782 aa15.57■□□□□ 0.08
SF3A1-204ENST00000447376 OPTCQ9UBM4 332 aa15.57■□□□□ 0.08
SF3A1-204ENST00000447376 CTSFQ9UBX1 484 aa15.57■□□□□ 0.08
SF3A1-204ENST00000447376 DCDC2Q9UHG0 476 aa15.57■□□□□ 0.08
SF3A1-204ENST00000447376 ZFP69BQ9UJL9 534 aa15.57■□□□□ 0.08
SF3A1-204ENST00000447376 PLAAQ9Y263 795 aa15.57■□□□□ 0.08
SF3A1-204ENST00000447376 MAP4K5Q9Y4K4 846 aa15.57■□□□□ 0.08
SF3A1-204ENST00000447376 ANGPTL3Q9Y5C1 460 aa15.57■□□□□ 0.08
SF3A1-204ENST00000447376 H0YIG0 161 aa15.56■□□□□ 0.08
SF3A1-204ENST00000447376 P2RX6O15547 441 aa15.56■□□□□ 0.08
SF3A1-204ENST00000447376 NSA2O95478 260 aaKnown RBP15.56■□□□□ 0.08
SF3A1-204ENST00000447376 GSTA1P08263 222 aa15.56■□□□□ 0.08
SF3A1-204ENST00000447376 C1GALT1C1LP0DN25 315 aa15.56■□□□□ 0.08
SF3A1-204ENST00000447376 MMP11P24347 488 aa15.56■□□□□ 0.08
SF3A1-204ENST00000447376 GSTM2P28161 218 aa15.56■□□□□ 0.08
SF3A1-204ENST00000447376 REEP5Q00765 189 aa15.56■□□□□ 0.08
SF3A1-204ENST00000447376 LAPTM5Q13571 262 aa15.56■□□□□ 0.08
SF3A1-204ENST00000447376 ATP1A4Q13733 1029 aa15.56■□□□□ 0.08
SF3A1-204ENST00000447376 ZXDCQ2QGD7 858 aaPredicted RBP15.56■□□□□ 0.08
SF3A1-204ENST00000447376 PAGE2BQ5JRK9 111 aa15.56■□□□□ 0.08
SF3A1-204ENST00000447376 FAM69BQ5VUD6 431 aa15.56■□□□□ 0.08
SF3A1-204ENST00000447376 ABHD13Q7L211 337 aa15.56■□□□□ 0.08
SF3A1-204ENST00000447376 VN1R4Q7Z5H5 301 aa15.56■□□□□ 0.08
SF3A1-204ENST00000447376 MRGPREQ86SM8 312 aa15.56■□□□□ 0.08
SF3A1-204ENST00000447376 CROCCP2Q86T23 111 aa15.56■□□□□ 0.08
SF3A1-204ENST00000447376 OR2W6PQ8NHA6 318 aa15.56■□□□□ 0.08
SF3A1-204ENST00000447376 STT3BQ8TCJ2 826 aa15.56■□□□□ 0.08
SF3A1-204ENST00000447376 ADAMTS17Q8TE56 1095 aa15.56■□□□□ 0.08
SF3A1-204ENST00000447376 GPR78Q96P69 363 aa15.56■□□□□ 0.08
SF3A1-204ENST00000447376 MRPL57Q9BQC6 102 aaKnown RBP15.56■□□□□ 0.08
SF3A1-204ENST00000447376 EFCAB11Q9BUY7 163 aa15.56■□□□□ 0.08
SF3A1-204ENST00000447376 CD244Q9BZW8 370 aa15.56■□□□□ 0.08
SF3A1-204ENST00000447376 MRPL46Q9H2W6 279 aaKnown RBP15.56■□□□□ 0.08
SF3A1-204ENST00000447376 SLC22A11Q9NSA0 550 aa15.56■□□□□ 0.08
SF3A1-204ENST00000447376 PTBP2Q9UKA9 531 aaKnown RBP15.56■□□□□ 0.08
SF3A1-204ENST00000447376 UBXN8O00124 270 aa15.55■□□□□ 0.08
SF3A1-204ENST00000447376 MAP2K7O14733 419 aa15.55■□□□□ 0.08
SF3A1-204ENST00000447376 PCDH17O14917 1159 aa15.55■□□□□ 0.08
SF3A1-204ENST00000447376 LCMT2O60294 686 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms