RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 ANKRD53Q8N9V6 530 aa11.34□□□□□ -0.59
RFC4-208ENST00000447345 CAMKVQ8NCB2 501 aa11.34□□□□□ -0.59
RFC4-208ENST00000447345 OR4K1Q8NGD4 311 aa11.34□□□□□ -0.59
RFC4-208ENST00000447345 MZB1Q8WU39 189 aa11.34□□□□□ -0.59
RFC4-208ENST00000447345 UBTD2Q8WUN7 234 aa11.34□□□□□ -0.59
RFC4-208ENST00000447345 SLC13A3Q8WWT9 602 aa11.34□□□□□ -0.59
RFC4-208ENST00000447345 CCT6BQ92526 530 aa11.34□□□□□ -0.59
RFC4-208ENST00000447345 CAVIN3Q969G5 261 aa11.34□□□□□ -0.59
RFC4-208ENST00000447345 PHF21BQ96EK2 531 aa11.34□□□□□ -0.59
RFC4-208ENST00000447345 THAP11Q96EK4 314 aa11.34□□□□□ -0.59
RFC4-208ENST00000447345 MMABQ96EY8 250 aaPredicted RBP11.34□□□□□ -0.59
RFC4-208ENST00000447345 C17orf62Q9BQA9 187 aa11.34□□□□□ -0.59
RFC4-208ENST00000447345 DRC3Q9H069 523 aa11.34□□□□□ -0.59
RFC4-208ENST00000447345 SOX17Q9H6I2 414 aaPredicted RBP11.34□□□□□ -0.59
RFC4-208ENST00000447345 ZNF304Q9HCX3 659 aa11.34□□□□□ -0.59
RFC4-208ENST00000447345 GEMIN8Q9NWZ8 242 aaKnown RBP11.34□□□□□ -0.59
RFC4-208ENST00000447345 GPRC5BQ9NZH0 403 aa11.34□□□□□ -0.59
RFC4-208ENST00000447345 ANGPTL3Q9Y5C1 460 aa11.34□□□□□ -0.59
RFC4-208ENST00000447345 ATRXP46100 2492 aa11.34□□□□□ -0.59
RFC4-208ENST00000447345 ZNF860A6NHJ4 632 aa11.33□□□□□ -0.6
RFC4-208ENST00000447345 K7EPI3 171 aa11.33□□□□□ -0.6
RFC4-208ENST00000447345 TXNDC9O14530 226 aa11.33□□□□□ -0.6
RFC4-208ENST00000447345 MAP2K7O14733 419 aa11.33□□□□□ -0.6
RFC4-208ENST00000447345 PRAMEF4O60810 478 aa11.33□□□□□ -0.6
RFC4-208ENST00000447345 SMIM24O75264 130 aa11.33□□□□□ -0.6
RFC4-208ENST00000447345 H2AFYO75367 372 aaKnown RBP11.33□□□□□ -0.6
RFC4-208ENST00000447345 RBP1P09455 135 aa11.33□□□□□ -0.6
RFC4-208ENST00000447345 PIM1P11309 404 aaPredicted RBP11.33□□□□□ -0.6
RFC4-208ENST00000447345 COL6A2P12110 1019 aa11.33□□□□□ -0.6
RFC4-208ENST00000447345 EEF1DP29692 281 aaKnown RBP11.33□□□□□ -0.6
RFC4-208ENST00000447345 ARL1P40616 181 aaPredicted RBP11.33□□□□□ -0.6
RFC4-208ENST00000447345 ALDH18A1P54886 795 aaKnown RBP11.33□□□□□ -0.6
RFC4-208ENST00000447345 MAT1AQ00266 395 aaKnown RBP11.33□□□□□ -0.6
RFC4-208ENST00000447345 RHDQ02161 417 aa11.33□□□□□ -0.6
RFC4-208ENST00000447345 IRF8Q02556 426 aa11.33□□□□□ -0.6
RFC4-208ENST00000447345 CHIT1Q13231 466 aa11.33□□□□□ -0.6
RFC4-208ENST00000447345 DOC2AQ14183 400 aa11.33□□□□□ -0.6
RFC4-208ENST00000447345 TBR1Q16650 682 aa11.33□□□□□ -0.6
RFC4-208ENST00000447345 NDUFA9Q16795 377 aa11.33□□□□□ -0.6
RFC4-208ENST00000447345 SYT16Q17RD7 645 aa11.33□□□□□ -0.6
RFC4-208ENST00000447345 GARNL3Q5VVW2 1013 aa11.33□□□□□ -0.6
RFC4-208ENST00000447345 PRAMEF9Q5VWM5 478 aa11.33□□□□□ -0.6
RFC4-208ENST00000447345 ATG9BQ674R7 924 aa11.33□□□□□ -0.6
RFC4-208ENST00000447345 TMEM214Q6NUQ4 689 aaKnown RBP11.33□□□□□ -0.6
RFC4-208ENST00000447345 TIFABQ6ZNK6 161 aa11.33□□□□□ -0.6
RFC4-208ENST00000447345 MYLK4Q86YV6 388 aaPredicted RBP11.33□□□□□ -0.6
RFC4-208ENST00000447345 CYP4X1Q8N118 509 aa11.33□□□□□ -0.6
RFC4-208ENST00000447345 ARHGEF39Q8N4T4 335 aa11.33□□□□□ -0.6
RFC4-208ENST00000447345 OR9A4Q8NGU2 314 aa11.33□□□□□ -0.6
RFC4-208ENST00000447345 ZBTB9Q96C00 473 aa11.33□□□□□ -0.6
RFC4-208ENST00000447345 TM4SF19Q96DZ7 209 aa11.33□□□□□ -0.6
RFC4-208ENST00000447345 ARHGAP9Q9BRR9 750 aa11.33□□□□□ -0.6
RFC4-208ENST00000447345 MRPL46Q9H2W6 279 aaKnown RBP11.33□□□□□ -0.6
RFC4-208ENST00000447345 ENAMQ9NRM1 1142 aa11.33□□□□□ -0.6
RFC4-208ENST00000447345 TMEM216Q9P0N5 145 aa11.33□□□□□ -0.6
RFC4-208ENST00000447345 TRPC4Q9UBN4 977 aa11.33□□□□□ -0.6
RFC4-208ENST00000447345 ZFP69BQ9UJL9 534 aa11.33□□□□□ -0.6
RFC4-208ENST00000447345 MAN2B2Q9Y2E5 1009 aa11.33□□□□□ -0.6
RFC4-208ENST00000447345 SGK494L7N484 410 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 FOXS1O43638 330 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 KLK8O60259 260 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 CDH16O75309 829 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 RDH16O75452 317 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 KLF7O75840 302 aaPredicted RBP11.32□□□□□ -0.6
RFC4-208ENST00000447345 B3GALT4O96024 378 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 FAM87AP0C7U9 286 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 ZNF888P0CJ79 500 aaPredicted RBP11.32□□□□□ -0.6
RFC4-208ENST00000447345 EPB42P16452 691 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 CD22P20273 847 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 CXCR2P25025 360 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 AVPR1BP47901 424 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 EMP3P54852 163 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 RGS1Q08116 209 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 CHAF1BQ13112 559 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 DSG2Q14126 1118 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 NKG7Q16617 165 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 UGT8Q16880 541 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 TOR1AIP1Q5JTV8 583 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 CPZQ66K79 652 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 MRPL14Q6P1L8 145 aaKnown RBP11.32□□□□□ -0.6
RFC4-208ENST00000447345 PRMT9Q6P2P2 845 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 BORAQ6PGQ7 559 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 TMIGD1Q6UXZ0 262 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 OVCH1Q7RTY7 1134 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 GOLGA7Q7Z5G4 137 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 KRT78Q8N1N4 520 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 AMER3Q8N944 861 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 OR2Y1Q8NGV0 311 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 TTC9Q92623 222 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 FKBP10Q96AY3 582 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 PTCD3Q96EY7 689 aaKnown RBP11.32□□□□□ -0.6
RFC4-208ENST00000447345 UBL7Q96S82 380 aaPredicted RBP11.32□□□□□ -0.6
RFC4-208ENST00000447345 MRPL57Q9BQC6 102 aaKnown RBP11.32□□□□□ -0.6
RFC4-208ENST00000447345 CAPS2Q9BXY5 557 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 RBCK1Q9BYM8 510 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 ANKHQ9HCJ1 492 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 ACSS2Q9NR19 701 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 HCN3Q9P1Z3 774 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 CDC14AQ9UNH5 594 aa11.32□□□□□ -0.6
RFC4-208ENST00000447345 POLHQ9Y253 713 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms