RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 GRIA1P42261 906 aa7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 MAGEA3P43357 314 aa7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 MAPK9P45984 424 aa7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 CDKN1CP49918 316 aaPredicted RBP7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 MECP2P51608 486 aaKnown RBP7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 ILF2Q12905 390 aaKnown RBP7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 BOP1Q14137 746 aaKnown RBP7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 TMED2Q15363 201 aa7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 CCDC38Q502W7 563 aa7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 CACHD1Q5VU97 1274 aa7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 PRAMEF9Q5VWM5 478 aa7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 KIAA0930Q6ICG6 404 aaPredicted RBP7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 C19orf48Q6RUI8 117 aa7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 ZNF534Q76KX8 674 aa7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 HOOK3Q86VS8 718 aa7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 CMTM4Q8IZR5 234 aa7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 CLDN19Q8N6F1 224 aa7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 NTN5Q8WTR8 489 aaPredicted RBP7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 LCN9Q8WX39 176 aa7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 TFGQ92734 400 aaPredicted RBP7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 RMDN2Q96LZ7 410 aa7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 SPRY4Q9C004 299 aa7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 CHRNA10Q9GZZ6 450 aa7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 FAM96AQ9H5X1 160 aa7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 PDE7BQ9NP56 450 aa7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 CHRAC1Q9NRG0 131 aa7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 OR6C2Q9NZP2 312 aa7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 TMEM9Q9P0T7 183 aa7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 KLHL42Q9P2K6 505 aa7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 PCYOX1Q9UHG3 505 aa7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 GNPTGQ9UJJ9 305 aa7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 PSMD13Q9UNM6 376 aa7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 FASNP49327 2511 aaKnown RBP7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 SDK2Q58EX2 2172 aa7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 ZFHX4Q86UP3 3567 aa7.5□□□□□ -1.21
SMARCE1-206ENST00000447024 MGAQ8IWI9 3026 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 CTAGE9A4FU28 777 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 CCDC188H7C350 402 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 CCL22O00626 93 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 GPC4O75487 556 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 NDUFS3O75489 264 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 RASSF9O75901 435 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 SLCO2B1O94956 709 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 ZBTB11O95625 1053 aaPredicted RBP7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 TTC4O95801 387 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 POLBP06746 335 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 TYRP1P17643 537 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 ACADLP28330 430 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 ATP5DP30049 168 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 SHMT2P34897 504 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 PAFAH1B1P43034 410 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 GFERP55789 205 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 GNG11P61952 73 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 HSD11B2P80365 405 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 MC1RQ01726 317 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 TYSND1Q2T9J0 566 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 SYTL3Q4VX76 610 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 DNTTIP2Q5QJE6 756 aaKnown RBP7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 MANEAQ5SRI9 462 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 PLEKHS1Q5SXH7 462 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 TMTC4Q5T4D3 741 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 IRGCQ6NXR0 463 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 TTC27Q6P3X3 843 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 UNC5DQ6UXZ4 953 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 TMEM135Q86UB9 458 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 CXorf67Q86X51 503 aaPredicted RBP7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 SLC22A15Q8IZD6 547 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 CACNA2D3Q8IZS8 1091 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 ESX1Q8N693 406 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 SIDT2Q8NBJ9 832 aaKnown RBP7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 OR5K2Q8NHB8 316 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 GSDMBQ8TAX9 411 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 CPT1CQ8TCG5 803 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 COG1Q8WTW3 980 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 CPT1BQ92523 772 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 ELMO1Q92556 727 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 RSC1A1Q92681 617 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 KIAA1143Q96AT1 154 aaPredicted RBP7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 SLC22A18Q96BI1 424 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 LRRC39Q96DD0 335 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 ZNF778Q96MU6 729 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 TGM7Q96PF1 710 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 NAPGQ99747 312 aaPredicted RBP7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 AP1M1Q9BXS5 423 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 TWSG1Q9GZX9 223 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 SRMSQ9H3Y6 488 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 INTS10Q9NVR2 710 aaKnown RBP7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 PIH1D1Q9NWS0 290 aaKnown RBP7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 HRASLS2Q9NWW9 162 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 OCIAD1Q9NX40 245 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 TRMT1Q9NXH9 659 aaKnown RBP7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 FOXJ2Q9P0K8 574 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 SLC2A6Q9UGQ3 507 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 PILRAQ9UKJ1 303 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 POMT2Q9UKY4 750 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 ASF1AQ9Y294 204 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 BTRCQ9Y297 605 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 SAR1BQ9Y6B6 198 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 NBEAQ8NFP9 2946 aa7.49□□□□□ -1.21
SMARCE1-206ENST00000447024 CCDC78A2IDD5 438 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms