RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 CAMKVQ8NCB2 501 aa14.09□□□□□ -0.15
HDAC4-204ENST00000446876 STT3BQ8TCJ2 826 aa14.09□□□□□ -0.15
HDAC4-204ENST00000446876 ABHD17AQ96GS6 310 aa14.09□□□□□ -0.15
HDAC4-204ENST00000446876 GPR78Q96P69 363 aa14.09□□□□□ -0.15
HDAC4-204ENST00000446876 SLC26A1Q9H2B4 701 aa14.09□□□□□ -0.15
HDAC4-204ENST00000446876 ADNPQ9H2P0 1102 aa14.09□□□□□ -0.15
HDAC4-204ENST00000446876 ANKZF1Q9H8Y5 726 aa14.09□□□□□ -0.15
HDAC4-204ENST00000446876 WDR54Q9H977 334 aa14.09□□□□□ -0.15
HDAC4-204ENST00000446876 ZNF71Q9NQZ8 489 aaPredicted RBP14.09□□□□□ -0.15
HDAC4-204ENST00000446876 DNAJC11Q9NVH1 559 aa14.09□□□□□ -0.15
HDAC4-204ENST00000446876 TRPC4Q9UBN4 977 aa14.09□□□□□ -0.15
HDAC4-204ENST00000446876 PTBP2Q9UKA9 531 aaKnown RBP14.09□□□□□ -0.15
HDAC4-204ENST00000446876 COL6A6A6NMZ7 2263 aa14.09□□□□□ -0.15
HDAC4-204ENST00000446876 SCN2AQ99250 2005 aa14.08□□□□□ -0.15
HDAC4-204ENST00000446876 ZNF860A6NHJ4 632 aa14.08□□□□□ -0.16
HDAC4-204ENST00000446876 VSTM2BA6NLU5 285 aa14.08□□□□□ -0.16
HDAC4-204ENST00000446876 ALOX12BO75342 701 aa14.08□□□□□ -0.16
HDAC4-204ENST00000446876 STK16O75716 305 aa14.08□□□□□ -0.16
HDAC4-204ENST00000446876 KRT38O76015 456 aa14.08□□□□□ -0.16
HDAC4-204ENST00000446876 IPO13O94829 963 aaKnown RBP14.08□□□□□ -0.16
HDAC4-204ENST00000446876 KLHL2O95198 593 aa14.08□□□□□ -0.16
HDAC4-204ENST00000446876 B3GALT4O96024 378 aa14.08□□□□□ -0.16
HDAC4-204ENST00000446876 ALBP02768 609 aa14.08□□□□□ -0.16
HDAC4-204ENST00000446876 CD63P08962 238 aa14.08□□□□□ -0.16
HDAC4-204ENST00000446876 SLC35G6P0C7Q6 338 aa14.08□□□□□ -0.16
HDAC4-204ENST00000446876 MTHFD2P13995 350 aa14.08□□□□□ -0.16
HDAC4-204ENST00000446876 GGT5P36269 586 aa14.08□□□□□ -0.16
HDAC4-204ENST00000446876 SLC26A3P40879 764 aa14.08□□□□□ -0.16
HDAC4-204ENST00000446876 CCL11P51671 97 aa14.08□□□□□ -0.16
HDAC4-204ENST00000446876 KLC1Q07866 573 aa14.08□□□□□ -0.16
HDAC4-204ENST00000446876 SLBPQ14493 270 aaKnown RBP eCLIP14.08□□□□□ -0.16
HDAC4-204ENST00000446876 SLC29A2Q14542 456 aa14.08□□□□□ -0.16
HDAC4-204ENST00000446876 RBBP5Q15291 538 aaKnown RBP14.08□□□□□ -0.16
HDAC4-204ENST00000446876 NDUFA9Q16795 377 aa14.08□□□□□ -0.16
HDAC4-204ENST00000446876 FAM83EQ2M2I3 478 aa14.08□□□□□ -0.16
HDAC4-204ENST00000446876 CDKL4Q5MAI5 379 aa14.08□□□□□ -0.16
HDAC4-204ENST00000446876 TAOK1Q7L7X3 1001 aa14.08□□□□□ -0.16
HDAC4-204ENST00000446876 PDSS2Q86YH6 399 aa14.08□□□□□ -0.16
HDAC4-204ENST00000446876 APLFQ8IW19 511 aaPredicted RBP14.08□□□□□ -0.16
HDAC4-204ENST00000446876 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.08□□□□□ -0.16
HDAC4-204ENST00000446876 C9orf43Q8TAL5 461 aaPredicted RBP14.08□□□□□ -0.16
HDAC4-204ENST00000446876 ISL2Q96A47 359 aa14.08□□□□□ -0.16
HDAC4-204ENST00000446876 MVB12AQ96EY5 273 aa14.08□□□□□ -0.16
HDAC4-204ENST00000446876 AIF1LQ9BQI0 150 aa14.08□□□□□ -0.16
HDAC4-204ENST00000446876 SARGQ9BW04 601 aa14.08□□□□□ -0.16
HDAC4-204ENST00000446876 ING2Q9H160 280 aa14.08□□□□□ -0.16
HDAC4-204ENST00000446876 CNOT10Q9H9A5 744 aaKnown RBP14.08□□□□□ -0.16
HDAC4-204ENST00000446876 ACSS2Q9NR19 701 aa14.08□□□□□ -0.16
HDAC4-204ENST00000446876 ZNF282Q9UDV7 671 aaPredicted RBP14.08□□□□□ -0.16
HDAC4-204ENST00000446876 ZNF180Q9UJW8 692 aa14.08□□□□□ -0.16
HDAC4-204ENST00000446876 CDC14AQ9UNH5 594 aa14.08□□□□□ -0.16
HDAC4-204ENST00000446876 LRRC14BA6NHZ5 514 aa14.07□□□□□ -0.16
HDAC4-204ENST00000446876 SGK494L7N484 410 aa14.07□□□□□ -0.16
HDAC4-204ENST00000446876 RDH16O75452 317 aa14.07□□□□□ -0.16
HDAC4-204ENST00000446876 ZGLP1P0C6A0 271 aa14.07□□□□□ -0.16
HDAC4-204ENST00000446876 C1GALT1C1LP0DN25 315 aa14.07□□□□□ -0.16
HDAC4-204ENST00000446876 GNAZP19086 355 aa14.07□□□□□ -0.16
HDAC4-204ENST00000446876 EPORP19235 508 aa14.07□□□□□ -0.16
HDAC4-204ENST00000446876 HNF4AP41235 474 aa14.07□□□□□ -0.16
HDAC4-204ENST00000446876 OCA2Q04671 838 aa14.07□□□□□ -0.16
HDAC4-204ENST00000446876 FAM53BQ14153 422 aa14.07□□□□□ -0.16
HDAC4-204ENST00000446876 PDK4Q16654 411 aa14.07□□□□□ -0.16
HDAC4-204ENST00000446876 TECRLQ5HYJ1 363 aa14.07□□□□□ -0.16
HDAC4-204ENST00000446876 COLEC12Q5KU26 742 aa14.07□□□□□ -0.16
HDAC4-204ENST00000446876 ADNP2Q6IQ32 1131 aa14.07□□□□□ -0.16
HDAC4-204ENST00000446876 CCDC91Q7Z6B0 441 aa14.07□□□□□ -0.16
HDAC4-204ENST00000446876 LAPTM4BQ86VI4 370 aa14.07□□□□□ -0.16
HDAC4-204ENST00000446876 ZC3H7AQ8IWR0 971 aaKnown RBP14.07□□□□□ -0.16
HDAC4-204ENST00000446876 TBC1D19Q8N5T2 526 aa14.07□□□□□ -0.16
HDAC4-204ENST00000446876 MIEF2Q96C03 454 aa14.07□□□□□ -0.16
HDAC4-204ENST00000446876 CRB3Q9BUF7 120 aa14.07□□□□□ -0.16
HDAC4-204ENST00000446876 CD244Q9BZW8 370 aa14.07□□□□□ -0.16
HDAC4-204ENST00000446876 SLC25A18Q9H1K4 315 aa14.07□□□□□ -0.16
HDAC4-204ENST00000446876 P4HTMQ9NXG6 502 aa14.07□□□□□ -0.16
HDAC4-204ENST00000446876 HCN3Q9P1Z3 774 aa14.07□□□□□ -0.16
HDAC4-204ENST00000446876 CPSF2Q9P2I0 782 aaKnown RBP14.07□□□□□ -0.16
HDAC4-204ENST00000446876 ZFP69BQ9UJL9 534 aa14.07□□□□□ -0.16
HDAC4-204ENST00000446876 NXT1Q9UKK6 140 aaKnown RBP14.07□□□□□ -0.16
HDAC4-204ENST00000446876 TP53TG5Q9Y2B4 290 aa14.07□□□□□ -0.16
HDAC4-204ENST00000446876 IGLV3-12A0A075B6K2 115 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 A6NL46 340 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 ESPNB1AK53 854 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 C4orf51C9J302 202 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 SOCS6O14544 535 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 MAP2K7O14733 419 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 CLGNO14967 610 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 PRPF4O43172 522 aaKnown RBP eCLIP14.06□□□□□ -0.16
HDAC4-204ENST00000446876 JRKO75564 520 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 KLHL18O94889 574 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 NSA2O95478 260 aaKnown RBP14.06□□□□□ -0.16
HDAC4-204ENST00000446876 PDGFAP04085 211 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 ZNF888P0CJ79 500 aaPredicted RBP14.06□□□□□ -0.16
HDAC4-204ENST00000446876 CD22P20273 847 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 MMP11P24347 488 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 TNFRSF8P28908 595 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 AVPR1BP47901 424 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 EFNA3P52797 238 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 HYAL2Q12891 473 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 RAPSNQ13702 412 aa14.06□□□□□ -0.16
HDAC4-204ENST00000446876 ACAP2Q15057 778 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms