RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-238ENST00000446312 PCDHB8Q9UN66 801 aa12.12□□□□□ -0.47
DDR1-238ENST00000446312 SLC35F4A4IF30 521 aa12.12□□□□□ -0.47
DDR1-238ENST00000446312 ATP6V1G2-DDX39BF2Z307 99 aa12.12□□□□□ -0.47
DDR1-238ENST00000446312 TSPAN4O14817 238 aa12.12□□□□□ -0.47
DDR1-238ENST00000446312 NUAK1O60285 661 aa12.12□□□□□ -0.47
DDR1-238ENST00000446312 ETFAP13804 333 aa12.12□□□□□ -0.47
DDR1-238ENST00000446312 BPIP17213 487 aa12.12□□□□□ -0.47
DDR1-238ENST00000446312 CTRB1P17538 263 aa12.12□□□□□ -0.47
DDR1-238ENST00000446312 SOX3P41225 446 aa12.12□□□□□ -0.47
DDR1-238ENST00000446312 PTGER3P43115 390 aa12.12□□□□□ -0.47
DDR1-238ENST00000446312 SLC35A2P78381 396 aa12.12□□□□□ -0.47
DDR1-238ENST00000446312 ACVR1Q04771 509 aa12.12□□□□□ -0.47
DDR1-238ENST00000446312 CAMK2GQ13555 558 aaPredicted RBP12.12□□□□□ -0.47
DDR1-238ENST00000446312 XKR6Q5GH73 641 aa12.12□□□□□ -0.47
DDR1-238ENST00000446312 CTRB2Q6GPI1 263 aa12.12□□□□□ -0.47
DDR1-238ENST00000446312 SERINC5Q86VE9 423 aa12.12□□□□□ -0.47
DDR1-238ENST00000446312 ENTHD1Q8IYW4 607 aa12.12□□□□□ -0.47
DDR1-238ENST00000446312 NAGSQ8N159 534 aa12.12□□□□□ -0.47
DDR1-238ENST00000446312 DYNC2LI1Q8TCX1 351 aa12.12□□□□□ -0.47
DDR1-238ENST00000446312 TRIB2Q92519 343 aa12.12□□□□□ -0.47
DDR1-238ENST00000446312 CCDC120Q96HB5 630 aa12.12□□□□□ -0.47
DDR1-238ENST00000446312 CCM2Q9BSQ5 444 aa12.12□□□□□ -0.47
DDR1-238ENST00000446312 SERHLQ9NQF3 203 aa12.12□□□□□ -0.47
DDR1-238ENST00000446312 DNMT3LQ9UJW3 386 aa12.12□□□□□ -0.47
DDR1-238ENST00000446312 DUSP12Q9UNI6 340 aa12.12□□□□□ -0.47
DDR1-238ENST00000446312 RNF6Q9Y252 685 aa12.12□□□□□ -0.47
DDR1-238ENST00000446312 ZSWIM8A7E2V4 1837 aa12.12□□□□□ -0.47
DDR1-238ENST00000446312 ZNF236Q9UL36 1845 aa12.12□□□□□ -0.47
DDR1-238ENST00000446312 A0A0G2JN53 185 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 WBP4O75554 376 aaKnown RBP12.11□□□□□ -0.47
DDR1-238ENST00000446312 ESR1P03372 595 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 JUNBP17275 347 aaPredicted RBP12.11□□□□□ -0.47
DDR1-238ENST00000446312 ITGALP20701 1170 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 YBEYP58557 167 aaPredicted RBP12.11□□□□□ -0.47
DDR1-238ENST00000446312 IRF8Q02556 426 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 NPRL3Q12980 569 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 TSTQ16762 297 aaKnown RBP12.11□□□□□ -0.47
DDR1-238ENST00000446312 ATP13A5Q4VNC0 1218 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 ARMCX4Q5H9R4 360 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 COX20Q5RI15 118 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 DEFB128Q7Z7B8 93 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 ZSWIM9Q86XI8 627 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 LYSMD2Q8IV50 215 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 GPR26Q8NDV2 337 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 OR8J3Q8NGG0 315 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 UBASH3BQ8TF42 649 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 MYO19Q96H55 970 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 PKP4Q99569 1192 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 APOL4Q9BPW4 351 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 CPPED1Q9BRF8 314 aaPredicted RBP12.11□□□□□ -0.47
DDR1-238ENST00000446312 SORBS1Q9BX66 1292 aaKnown RBP12.11□□□□□ -0.47
DDR1-238ENST00000446312 SLIRPQ9GZT3 109 aaKnown RBP12.11□□□□□ -0.47
DDR1-238ENST00000446312 RPRD1BQ9NQG5 326 aaKnown RBP12.11□□□□□ -0.47
DDR1-238ENST00000446312 SNTG1Q9NSN8 517 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 SPASTQ9UBP0 616 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 RAB23Q9ULC3 237 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 GLYATL1P3A0A0U1RQE8 302 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 TMEM202A6NGA9 273 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 ZW10O43264 779 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 GABARAPO95166 117 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 CD160O95971 181 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 TYMPP19971 482 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 KDELR2P33947 212 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 FLT3LGP49771 235 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 CAV3P56539 151 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 KCNC4Q03721 635 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 NFATC2Q13469 925 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 MBTPS1Q14703 1052 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 ZNF404Q494X3 552 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 FAM205BPQ63HN1 556 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 ZNF467Q7Z7K2 595 aaPredicted RBP12.11□□□□□ -0.47
DDR1-238ENST00000446312 GPR149Q86SP6 731 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 NUAK2Q9H093 628 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 TOR4AQ9NXH8 423 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 FZD4Q9ULV1 537 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 C12orf71A8MTZ7 269 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 SCO1O75880 301 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 STC2O76061 302 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 CCR7P32248 378 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 CTSKP43235 329 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 CSNK1DP48730 415 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 SLC11A1P49279 550 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 CACNG1Q06432 222 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 ST3GAL4Q11206 333 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 NAE1Q13564 534 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 DOC2BQ14184 412 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 PCBP1Q15365 356 aaKnown RBP eCLIP12.11□□□□□ -0.475e-10■■□□□ 14.1
DDR1-238ENST00000446312 ABI3BPQ7Z7G0 1075 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 C11orf96Q7Z7L8 435 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 GLCCI1Q86VQ1 547 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 STK40Q8N2I9 435 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 METTL4Q8N3J2 472 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 SAMD11Q96NU1 681 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 ZNF300Q96RE9 604 aaPredicted RBP12.11□□□□□ -0.47
DDR1-238ENST00000446312 P2RY13Q9BPV8 354 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 YTHDF1Q9BYJ9 559 aaKnown RBP12.11□□□□□ -0.47
DDR1-238ENST00000446312 CLMPQ9H6B4 373 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 ZDHHC6Q9H6R6 413 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 DNAJC27Q9NZQ0 273 aa12.11□□□□□ -0.47
DDR1-238ENST00000446312 CCL27Q9Y4X3 112 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms