RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 TRMT6Q9UJA5 497 aaKnown RBP8.36□□□□□ -1.07
USP6NL-203ENST00000443016 FER1L5A0AVI2 2057 aa8.36□□□□□ -1.07
USP6NL-203ENST00000443016 LOC105369274A0A096LPK9 316 aa8.36□□□□□ -1.07
USP6NL-203ENST00000443016 LOC102723532A0A0G2JNH3 316 aa8.36□□□□□ -1.07
USP6NL-203ENST00000443016 A0A1W2PPV9 198 aa8.36□□□□□ -1.07
USP6NL-203ENST00000443016 MYO1CO00159 1063 aa8.36□□□□□ -1.07
USP6NL-203ENST00000443016 NRP2O60462 931 aa8.36□□□□□ -1.07
USP6NL-203ENST00000443016 CNOT3O75175 753 aaKnown RBP8.36□□□□□ -1.07
USP6NL-203ENST00000443016 CCNDBP1O95273 360 aa8.36□□□□□ -1.07
USP6NL-203ENST00000443016 ALBP02768 609 aa8.36□□□□□ -1.07
USP6NL-203ENST00000443016 ITGA3P26006 1051 aa8.36□□□□□ -1.07
USP6NL-203ENST00000443016 YBX1P67809 324 aaKnown RBP8.36□□□□□ -1.07
USP6NL-203ENST00000443016 OCA2Q04671 838 aa8.36□□□□□ -1.07
USP6NL-203ENST00000443016 MUM1Q2TAK8 710 aa8.36□□□□□ -1.07
USP6NL-203ENST00000443016 UGT3A1Q6NUS8 523 aa8.36□□□□□ -1.07
USP6NL-203ENST00000443016 NEK10Q6ZWH5 1172 aa8.36□□□□□ -1.07
USP6NL-203ENST00000443016 CPNE9Q8IYJ1 553 aa8.36□□□□□ -1.07
USP6NL-203ENST00000443016 OR4N4Q8N0Y3 316 aa8.36□□□□□ -1.07
USP6NL-203ENST00000443016 GIMAP7Q8NHV1 300 aa8.36□□□□□ -1.07
USP6NL-203ENST00000443016 ZNF480Q8WV37 535 aa8.36□□□□□ -1.07
USP6NL-203ENST00000443016 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.36□□□□□ -1.07
USP6NL-203ENST00000443016 ASB11Q8WXH4 323 aa8.36□□□□□ -1.07
USP6NL-203ENST00000443016 RERGQ96A58 199 aaPredicted RBP8.36□□□□□ -1.07
USP6NL-203ENST00000443016 FKBP10Q96AY3 582 aa8.36□□□□□ -1.07
USP6NL-203ENST00000443016 RBBP8Q99708 897 aa8.36□□□□□ -1.07
USP6NL-203ENST00000443016 YIPF2Q9BWQ6 316 aa8.36□□□□□ -1.07
USP6NL-203ENST00000443016 RHOJQ9H4E5 214 aa8.36□□□□□ -1.07
USP6NL-203ENST00000443016 SOX17Q9H6I2 414 aaPredicted RBP8.36□□□□□ -1.07
USP6NL-203ENST00000443016 ZNF304Q9HCX3 659 aa8.36□□□□□ -1.07
USP6NL-203ENST00000443016 ATP13A2Q9NQ11 1180 aa8.36□□□□□ -1.07
USP6NL-203ENST00000443016 SLC22A11Q9NSA0 550 aa8.36□□□□□ -1.07
USP6NL-203ENST00000443016 MRGBPQ9NV56 204 aa8.36□□□□□ -1.07
USP6NL-203ENST00000443016 ZNF446Q9NWS9 450 aa8.36□□□□□ -1.07
USP6NL-203ENST00000443016 NXT1Q9UKK6 140 aaKnown RBP8.36□□□□□ -1.07
USP6NL-203ENST00000443016 DHRS7Q9Y394 339 aa8.36□□□□□ -1.07
USP6NL-203ENST00000443016 UTP20O75691 2785 aaKnown RBP8.36□□□□□ -1.07
USP6NL-203ENST00000443016 TNRC6AQ8NDV7 1962 aaKnown RBP8.35□□□□□ -1.07
USP6NL-203ENST00000443016 PABPN1LA6NDY0 278 aaKnown RBP8.35□□□□□ -1.07
USP6NL-203ENST00000443016 AGPSO00116 658 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 KLHL41O60662 606 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 CEACAM4O75871 244 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 UMODP07911 640 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 KRT15P19012 456 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 MMP11P24347 488 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 RGS4P49798 205 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 SLC12A2P55011 1212 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 PRDX1Q06830 199 aaKnown RBP8.35□□□□□ -1.07
USP6NL-203ENST00000443016 MYBPC3Q14896 1274 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 NKG7Q16617 165 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 ZNF549Q6P9A3 640 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 ADGRD1Q6QNK2 874 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 UBE2R2Q712K3 238 aaPredicted RBP8.35□□□□□ -1.07
USP6NL-203ENST00000443016 PIWIL4Q7Z3Z4 852 aaKnown RBP8.35□□□□□ -1.07
USP6NL-203ENST00000443016 HPS6Q86YV9 775 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 PRSS58Q8IYP2 241 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 CD200R1Q8TD46 325 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 TM9SF4Q92544 642 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 NACC2Q96BF6 587 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 VPS50Q96JG6 964 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 NDNQ99608 321 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 WDR54Q9H977 334 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 MED4Q9NPJ6 270 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 SMYD2Q9NRG4 433 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 TAS2R13Q9NYV9 303 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 SENP1Q9P0U3 644 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 STOX2Q9P2F5 926 aaPredicted RBP8.35□□□□□ -1.07
USP6NL-203ENST00000443016 CTSFQ9UBX1 484 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 LGALS13Q9UHV8 139 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 OR2A25A4D2G3 310 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 FITM1A5D6W6 292 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 CXorf49A8MYA2 514 aaPredicted RBP8.35□□□□□ -1.07
USP6NL-203ENST00000443016 E7ENX8 843 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 H0YGG7 62 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 PDPK1O15530 556 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 C1QAP02745 245 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 SNRPAP09012 282 aaKnown RBP8.35□□□□□ -1.07
USP6NL-203ENST00000443016 MPC1LP0DKB6 136 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 SKIV2L2P42285 1042 aaKnown RBP8.35□□□□□ -1.07
USP6NL-203ENST00000443016 CASP2P42575 452 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 ARF3P61204 181 aaPredicted RBP8.35□□□□□ -1.07
USP6NL-203ENST00000443016 TAP2Q03519 686 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 RBBP7Q16576 425 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 VWA5B1Q5TIE3 1220 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 LRRC8EQ6NSJ5 796 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 JMJD6Q6NYC1 403 aaPredicted RBP8.35□□□□□ -1.07
USP6NL-203ENST00000443016 PRMT9Q6P2P2 845 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 RNF44Q7L0R7 432 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 PPP1R32Q7Z5V6 425 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 EGFL6Q8IUX8 553 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 AFAP1L2Q8N4X5 818 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 DTWD1Q8N5C7 304 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 MCOLN3Q8TDD5 553 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 DCAKDQ8WVC6 231 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 MIB2Q96AX9 1013 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 TSPAN17Q96FV3 270 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 PGM2Q96G03 612 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 VPS39Q96JC1 886 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 ZNF285Q96NJ3 590 aa8.35□□□□□ -1.07
USP6NL-203ENST00000443016 AARSD1Q9BTE6 412 aaKnown RBP8.35□□□□□ -1.07
USP6NL-203ENST00000443016 CRB3Q9BUF7 120 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms