RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 PNLIPRP1P54315 467 aa13.99□□□□□ -0.17
TNFRSF1A-204ENST00000440083 RPL38P63173 70 aaKnown RBP13.99□□□□□ -0.17
TNFRSF1A-204ENST00000440083 EMX2Q04743 252 aa13.99□□□□□ -0.17
TNFRSF1A-204ENST00000440083 CHIT1Q13231 466 aa13.99□□□□□ -0.17
TNFRSF1A-204ENST00000440083 TSTA3Q13630 321 aaPredicted RBP13.99□□□□□ -0.17
TNFRSF1A-204ENST00000440083 SPIDRQ14159 915 aa13.99□□□□□ -0.17
TNFRSF1A-204ENST00000440083 SMU1Q2TAY7 513 aa13.99□□□□□ -0.17
TNFRSF1A-204ENST00000440083 AP5B1Q2VPB7 878 aa13.99□□□□□ -0.17
TNFRSF1A-204ENST00000440083 CCSMST1Q4G0I0 132 aa13.99□□□□□ -0.17
TNFRSF1A-204ENST00000440083 XKR6Q5GH73 641 aa13.99□□□□□ -0.17
TNFRSF1A-204ENST00000440083 LIPJQ5W064 366 aa13.99□□□□□ -0.17
TNFRSF1A-204ENST00000440083 RBM44Q6ZP01 1051 aaKnown RBP13.99□□□□□ -0.17
TNFRSF1A-204ENST00000440083 TMPRSS12Q86WS5 348 aa13.99□□□□□ -0.17
TNFRSF1A-204ENST00000440083 DCUN1D3Q8IWE4 304 aa13.99□□□□□ -0.17
TNFRSF1A-204ENST00000440083 L3MBTL4Q8NA19 623 aa13.99□□□□□ -0.17
TNFRSF1A-204ENST00000440083 OR9I1Q8NGQ6 314 aa13.99□□□□□ -0.17
TNFRSF1A-204ENST00000440083 OR56A3Q8NH54 315 aa13.99□□□□□ -0.17
TNFRSF1A-204ENST00000440083 HMGCLL1Q8TB92 370 aa13.99□□□□□ -0.17
TNFRSF1A-204ENST00000440083 USP7Q93009 1102 aa13.99□□□□□ -0.17
TNFRSF1A-204ENST00000440083 HBEGFQ99075 208 aa13.99□□□□□ -0.17
TNFRSF1A-204ENST00000440083 ZBTB18Q99592 522 aa13.99□□□□□ -0.17
TNFRSF1A-204ENST00000440083 BRINP2Q9C0B6 783 aa13.99□□□□□ -0.17
TNFRSF1A-204ENST00000440083 LRTM1Q9HBL6 345 aa13.99□□□□□ -0.17
TNFRSF1A-204ENST00000440083 TMEM45AQ9NWC5 275 aa13.99□□□□□ -0.17
TNFRSF1A-204ENST00000440083 GPRC5BQ9NZH0 403 aa13.99□□□□□ -0.17
TNFRSF1A-204ENST00000440083 ZIM2Q9NZV7 527 aa13.99□□□□□ -0.17
TNFRSF1A-204ENST00000440083 SLC7A8Q9UHI5 535 aa13.99□□□□□ -0.17
TNFRSF1A-204ENST00000440083 ASF1AQ9Y294 204 aa13.99□□□□□ -0.17
TNFRSF1A-204ENST00000440083 POLR3HQ9Y535 204 aaPredicted RBP13.99□□□□□ -0.17
TNFRSF1A-204ENST00000440083 GPR45Q9Y5Y3 372 aa13.99□□□□□ -0.17
TNFRSF1A-204ENST00000440083 KCNE1BA0A087WTH5 132 aa13.98□□□□□ -0.17
TNFRSF1A-204ENST00000440083 LILRA5A6NI73 299 aa13.98□□□□□ -0.17
TNFRSF1A-204ENST00000440083 SLC22A3O75751 556 aa13.98□□□□□ -0.17
TNFRSF1A-204ENST00000440083 SLC16A8O95907 504 aa13.98□□□□□ -0.17
TNFRSF1A-204ENST00000440083 EPORP19235 508 aa13.98□□□□□ -0.17
TNFRSF1A-204ENST00000440083 ACADLP28330 430 aa13.98□□□□□ -0.17
TNFRSF1A-204ENST00000440083 HNF4AP41235 474 aa13.98□□□□□ -0.17
TNFRSF1A-204ENST00000440083 DIO3P55073 304 aa13.98□□□□□ -0.17
TNFRSF1A-204ENST00000440083 TBPL1P62380 186 aa13.98□□□□□ -0.17
TNFRSF1A-204ENST00000440083 PRKG2Q13237 762 aa13.98□□□□□ -0.17
TNFRSF1A-204ENST00000440083 CACHD1Q5VU97 1274 aa13.98□□□□□ -0.17
TNFRSF1A-204ENST00000440083 GRHL2Q6ISB3 625 aa13.98□□□□□ -0.17
TNFRSF1A-204ENST00000440083 HACD2Q6Y1H2 254 aa13.98□□□□□ -0.17
TNFRSF1A-204ENST00000440083 RIPOR1Q6ZS17 1223 aa13.98□□□□□ -0.17
TNFRSF1A-204ENST00000440083 Q6ZSR9 355 aa13.98□□□□□ -0.17
TNFRSF1A-204ENST00000440083 TRIM46Q7Z4K8 759 aa13.98□□□□□ -0.17
TNFRSF1A-204ENST00000440083 GALNT15Q8N3T1 639 aa13.98□□□□□ -0.17
TNFRSF1A-204ENST00000440083 FBXW8Q8N3Y1 598 aa13.98□□□□□ -0.17
TNFRSF1A-204ENST00000440083 RAB42Q8N4Z0 105 aa13.98□□□□□ -0.17
TNFRSF1A-204ENST00000440083 TSPEARQ8WU66 669 aa13.98□□□□□ -0.17
TNFRSF1A-204ENST00000440083 RSC1A1Q92681 617 aa13.98□□□□□ -0.17
TNFRSF1A-204ENST00000440083 TFGQ92734 400 aaPredicted RBP13.98□□□□□ -0.17
TNFRSF1A-204ENST00000440083 RAD51AP1Q96B01 352 aa13.98□□□□□ -0.17
TNFRSF1A-204ENST00000440083 DEPDC7Q96QD5 511 aa13.98□□□□□ -0.17
TNFRSF1A-204ENST00000440083 SEMA6CQ9H3T2 930 aa13.98□□□□□ -0.17
TNFRSF1A-204ENST00000440083 RNPEPL1Q9HAU8 725 aa13.98□□□□□ -0.17
TNFRSF1A-204ENST00000440083 GID8Q9NWU2 228 aa13.98□□□□□ -0.17
TNFRSF1A-204ENST00000440083 CIDEBQ9UHD4 219 aa13.98□□□□□ -0.17
TNFRSF1A-204ENST00000440083 BCAP29Q9UHQ4 241 aa13.98□□□□□ -0.17
TNFRSF1A-204ENST00000440083 ANGPTL2Q9UKU9 493 aa13.98□□□□□ -0.17
TNFRSF1A-204ENST00000440083 KCNE2Q9Y6J6 123 aa13.98□□□□□ -0.17
TNFRSF1A-204ENST00000440083 A0A1W2PNU3 283 aaPredicted RBP13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 FAM234BA2RU67 622 aa13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 CCDC154A6NI56 674 aa13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 ZNF839A8K0R7 811 aa13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 RSL1D1O76021 490 aaKnown RBP13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 PDYNP01213 254 aa13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 PROS1P07225 676 aa13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 CD1EP15812 388 aa13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 GNAZP19086 355 aa13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 MAPK1P28482 360 aa13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 PSME3P61289 254 aa13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 PPP1CAP62136 330 aa13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 SHC2P98077 582 aa13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 HMGCS1Q01581 520 aa13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 ZNF33BQ06732 778 aa13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 CSTF3Q12996 717 aaKnown RBP13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 ISXQ2M1V0 245 aa13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 IL23RQ5VWK5 629 aa13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 PRMT9Q6P2P2 845 aa13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 ZNF574Q6ZN55 896 aaPredicted RBP13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 ZFAND4Q86XD8 727 aa13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 AVL9Q8NBF6 648 aa13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 PPFIBP2Q8ND30 876 aa13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 OR5AR1Q8NGP9 310 aa13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 OR10G6Q8NH81 332 aa13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 JADE3Q92613 823 aa13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 SH3KBP1Q96B97 665 aa13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 ROPN1LQ96C74 230 aa13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 CCDC124Q96CT7 223 aaKnown RBP13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 REPS1Q96D71 796 aa13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 SPDL1Q96EA4 605 aa13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 FERD3LQ96RJ6 166 aa13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 TRIT1Q9H3H1 467 aaKnown RBP13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 UCK1Q9HA47 277 aa13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 CCDC177Q9NQR7 707 aaPredicted RBP13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 FARSBQ9NSD9 589 aaKnown RBP13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 C1orf109Q9NX04 203 aa13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 ADA2Q9NZK5 511 aa13.97□□□□□ -0.17
TNFRSF1A-204ENST00000440083 CROTQ9UKG9 612 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms